RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 USP19O94966 1318 aa29.97■■■□□ 2.39
NPLOC4-217ENST00000574897 SMC5Q8IY18 1101 aa29.96■■■□□ 2.39
NPLOC4-217ENST00000574897 DDRGK1Q96HY6 314 aa29.96■■■□□ 2.39
NPLOC4-217ENST00000574897 USHBP1Q8N6Y0 703 aa29.93■■■□□ 2.38
NPLOC4-217ENST00000574897 RTF1Q92541 710 aaKnown RBP29.92■■■□□ 2.38
NPLOC4-217ENST00000574897 XPCQ01831 940 aaPredicted RBP29.92■■■□□ 2.38
NPLOC4-217ENST00000574897 PSME1Q06323 249 aa29.92■■■□□ 2.38
NPLOC4-217ENST00000574897 ORAI2Q96SN7 254 aa29.92■■■□□ 2.38
NPLOC4-217ENST00000574897 PLEKHG5O94827 1062 aa29.91■■■□□ 2.38
NPLOC4-217ENST00000574897 KIAA0232Q92628 1395 aa29.9■■■□□ 2.38
NPLOC4-217ENST00000574897 RGPD2P0DJD1 1756 aa29.9■■■□□ 2.38
NPLOC4-217ENST00000574897 API5Q9BZZ5 524 aaKnown RBP29.9■■■□□ 2.38
NPLOC4-217ENST00000574897 KIF24Q5T7B8 1368 aa29.89■■■□□ 2.38
NPLOC4-217ENST00000574897 NFAT5O94916 1531 aa29.89■■■□□ 2.38
NPLOC4-217ENST00000574897 GAS2L2Q8NHY3 880 aa29.89■■■□□ 2.37
NPLOC4-217ENST00000574897 TSPYL4Q9UJ04 414 aa29.89■■■□□ 2.37
NPLOC4-217ENST00000574897 RGS12O14924 1447 aa29.88■■■□□ 2.37
NPLOC4-217ENST00000574897 ZBTB7CA1YPR0 619 aa29.88■■■□□ 2.37
NPLOC4-217ENST00000574897 SIRT2Q8IXJ6 389 aa29.86■■■□□ 2.37
NPLOC4-217ENST00000574897 LRRC37A3O60309 1634 aa29.86■■■□□ 2.37
NPLOC4-217ENST00000574897 LNPKQ9C0E8 428 aa29.86■■■□□ 2.37
NPLOC4-217ENST00000574897 NUCB1Q02818 461 aa29.84■■■□□ 2.37
NPLOC4-217ENST00000574897 RTL1A6NKG5 1358 aa29.82■■■□□ 2.36
NPLOC4-217ENST00000574897 GNAT3A8MTJ3 354 aa29.82■■■□□ 2.36
NPLOC4-217ENST00000574897 IP6K1Q92551 441 aa29.82■■■□□ 2.36
NPLOC4-217ENST00000574897 MSH6P52701 1360 aa29.81■■■□□ 2.36
NPLOC4-217ENST00000574897 SLC4A2P04920 1241 aa29.81■■■□□ 2.36
NPLOC4-217ENST00000574897 IL17REQ8NFR9 667 aa29.8■■■□□ 2.36
NPLOC4-217ENST00000574897 NBPF6Q5VWK0 638 aa29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 G2E3Q7L622 706 aa29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 CHD1LQ86WJ1 897 aa29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 PROSER2Q86WR7 435 aaPredicted RBP29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 NBPF4Q96M43 638 aa29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 CHMP4BQ9H444 224 aaKnown RBP29.79■■■□□ 2.36
NPLOC4-217ENST00000574897 HAP1P54257 671 aaPredicted RBP29.78■■■□□ 2.36
NPLOC4-217ENST00000574897 INTS3Q68E01 1043 aaKnown RBP29.78■■■□□ 2.36
NPLOC4-217ENST00000574897 MAP3K5Q99683 1374 aa29.78■■■□□ 2.36
NPLOC4-217ENST00000574897 ANKRD45Q5TZF3 282 aa29.77■■■□□ 2.36
NPLOC4-217ENST00000574897 LMOD2Q6P5Q4 547 aa29.77■■■□□ 2.36
NPLOC4-217ENST00000574897 LRRC59Q96AG4 307 aaKnown RBP29.76■■■□□ 2.35
NPLOC4-217ENST00000574897 DAXXQ9UER7 740 aaPredicted RBP29.76■■■□□ 2.35
NPLOC4-217ENST00000574897 HTATSF1O43719 755 aaKnown RBP29.75■■■□□ 2.35
NPLOC4-217ENST00000574897 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
NPLOC4-217ENST00000574897 FAM208AQ9UK61 1670 aaKnown RBP29.74■■■□□ 2.35
NPLOC4-217ENST00000574897 KCNH5Q8NCM2 988 aa29.73■■■□□ 2.35
NPLOC4-217ENST00000574897 NECTIN2Q92692 538 aa29.73■■■□□ 2.35
NPLOC4-217ENST00000574897 GCC1Q96CN9 775 aa29.73■■■□□ 2.35
NPLOC4-217ENST00000574897 PTPRCP08575 1304 aa29.73■■■□□ 2.35
NPLOC4-217ENST00000574897 PHRF1Q9P1Y6 1649 aaKnown RBP29.73■■■□□ 2.35
NPLOC4-217ENST00000574897 F6X3S4 739 aa29.72■■■□□ 2.35
NPLOC4-217ENST00000574897 GCP02774 474 aa29.72■■■□□ 2.35
NPLOC4-217ENST00000574897 STRCP1A6NGW2 1772 aa29.71■■■□□ 2.35
NPLOC4-217ENST00000574897 TBC1D32Q96NH3 1257 aa29.71■■■□□ 2.35
NPLOC4-217ENST00000574897 MEIS3Q99687 375 aa29.7■■■□□ 2.35
NPLOC4-217ENST00000574897 ATP10DQ9P241 1426 aa29.7■■■□□ 2.34
NPLOC4-217ENST00000574897 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.34
NPLOC4-217ENST00000574897 RGPD5Q99666 1765 aa29.7■■■□□ 2.34
NPLOC4-217ENST00000574897 C1orf167Q5SNV9 1468 aa29.69■■■□□ 2.34
NPLOC4-217ENST00000574897 UPF2Q9HAU5 1272 aaKnown RBP29.69■■■□□ 2.34
NPLOC4-217ENST00000574897 SLIT3O75094 1523 aa29.69■■■□□ 2.34
NPLOC4-217ENST00000574897 MFAP1P55081 439 aaKnown RBP29.68■■■□□ 2.34
NPLOC4-217ENST00000574897 SLC4A10Q6U841 1118 aa29.68■■■□□ 2.34
NPLOC4-217ENST00000574897 KRT28Q7Z3Y7 464 aa29.68■■■□□ 2.34
NPLOC4-217ENST00000574897 BCL11AQ9H165 835 aa29.68■■■□□ 2.34
NPLOC4-217ENST00000574897 TAF7Q15545 349 aaPredicted RBP29.67■■■□□ 2.34
NPLOC4-217ENST00000574897 ARHGEF25Q86VW2 580 aa29.67■■■□□ 2.34
NPLOC4-217ENST00000574897 LGR6Q9HBX8 967 aa29.66■■■□□ 2.34
NPLOC4-217ENST00000574897 CACNA1FO60840 1977 aa29.65■■■□□ 2.34
NPLOC4-217ENST00000574897 DDX17Q92841 729 aaKnown RBP29.64■■■□□ 2.34
NPLOC4-217ENST00000574897 C19orf44Q9H6X5 657 aa29.64■■■□□ 2.34
NPLOC4-217ENST00000574897 KIF1AQ12756 1690 aa29.63■■■□□ 2.33
NPLOC4-217ENST00000574897 CEP85Q6P2H3 762 aa29.63■■■□□ 2.33
NPLOC4-217ENST00000574897 ANKRD44Q8N8A2 993 aa29.63■■■□□ 2.33
NPLOC4-217ENST00000574897 STK31Q9BXU1 1019 aa29.63■■■□□ 2.33
NPLOC4-217ENST00000574897 AXIN2Q9Y2T1 843 aa29.63■■■□□ 2.33
NPLOC4-217ENST00000574897 RTL5Q5HYW3 569 aaPredicted RBP29.62■■■□□ 2.33
NPLOC4-217ENST00000574897 DCTPP1Q9H773 170 aa29.61■■■□□ 2.33
NPLOC4-217ENST00000574897 CEMIPQ8WUJ3 1361 aa29.61■■■□□ 2.33
NPLOC4-217ENST00000574897 LMO7Q8WWI1 1683 aa29.61■■■□□ 2.33
NPLOC4-217ENST00000574897 CCDC30Q5VVM6 783 aa29.6■■■□□ 2.33
NPLOC4-217ENST00000574897 FLIIQ13045 1269 aa29.6■■■□□ 2.33
NPLOC4-217ENST00000574897 ANKRD24Q8TF21 1146 aa29.6■■■□□ 2.33
NPLOC4-217ENST00000574897 TMEM94Q12767 1356 aa29.59■■■□□ 2.33
NPLOC4-217ENST00000574897 ALS2Q96Q42 1657 aa29.59■■■□□ 2.33
NPLOC4-217ENST00000574897 PXDNQ92626 1479 aa29.59■■■□□ 2.33
NPLOC4-217ENST00000574897 MED1Q15648 1581 aaPredicted RBP29.59■■■□□ 2.33
NPLOC4-217ENST00000574897 C22orf23Q9BZE7 217 aa29.59■■■□□ 2.33
NPLOC4-217ENST00000574897 KDM3BQ7LBC6 1761 aa29.58■■■□□ 2.33
NPLOC4-217ENST00000574897 FKBP5Q13451 457 aaPredicted RBP29.58■■■□□ 2.33
NPLOC4-217ENST00000574897 BMP2KLQ5H9B9 411 aa29.58■■■□□ 2.33
NPLOC4-217ENST00000574897 ZNF530Q6P9A1 599 aaPredicted RBP29.57■■■□□ 2.32
NPLOC4-217ENST00000574897 MST1RQ04912 1400 aa29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 KCNQ3O43525 872 aa29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 HSPA2P54652 639 aa29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 ZC3H6P61129 1189 aaKnown RBP29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 MPRIPQ6WCQ1 1025 aa29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 RPAP2Q8IXW5 612 aaPredicted RBP29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 C16orf71Q8IYS4 520 aaPredicted RBP29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 APBB1O00213 710 aa29.56■■■□□ 2.32
NPLOC4-217ENST00000574897 CCT4P50991 539 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms