RNA–Protein interactions for RNA: ENST00000571335.5

SLC47A1-206, Transcript of solute carrier family 47 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC47A1, Length 1,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-206ENST00000571335 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
SLC47A1-206ENST00000571335 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
SLC47A1-206ENST00000571335 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
SLC47A1-206ENST00000571335 PKD1L3Q7Z443 1732 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 IL2RBP14784 551 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 RIPK4P57078 832 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
SLC47A1-206ENST00000571335 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
SLC47A1-206ENST00000571335 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
SLC47A1-206ENST00000571335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
SLC47A1-206ENST00000571335 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
SLC47A1-206ENST00000571335 TRIM35Q9UPQ4 493 aa18.44■□□□□ 0.54
SLC47A1-206ENST00000571335 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
SLC47A1-206ENST00000571335 ATRNO75882 1429 aa18.44■□□□□ 0.54
SLC47A1-206ENST00000571335 BARGINQ6ZT62 677 aa18.43■□□□□ 0.54
SLC47A1-206ENST00000571335 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
SLC47A1-206ENST00000571335 SPG7Q9UQ90 795 aa18.43■□□□□ 0.54
SLC47A1-206ENST00000571335 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
SLC47A1-206ENST00000571335 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
SLC47A1-206ENST00000571335 SHANK3Q9BYB0 1731 aa18.42■□□□□ 0.54
SLC47A1-206ENST00000571335 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
SLC47A1-206ENST00000571335 ZNF530Q6P9A1 599 aaPredicted RBP18.41■□□□□ 0.54
SLC47A1-206ENST00000571335 GLI3P10071 1580 aa18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
SLC47A1-206ENST00000571335 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
SLC47A1-206ENST00000571335 QTRT2Q9H974 415 aaKnown RBP18.39■□□□□ 0.53
SLC47A1-206ENST00000571335 PHKG2P15735 406 aa18.38■□□□□ 0.53
SLC47A1-206ENST00000571335 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
SLC47A1-206ENST00000571335 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
SLC47A1-206ENST00000571335 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
SLC47A1-206ENST00000571335 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
SLC47A1-206ENST00000571335 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 LRRC37A3O60309 1634 aa18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 CYP27B1O15528 508 aa18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
SLC47A1-206ENST00000571335 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 THSD7AQ9UPZ6 1657 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 EXOC5O00471 708 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 FAM98CQ17RN3 349 aaKnown RBP18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 MCM10Q7L590 875 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
SLC47A1-206ENST00000571335 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
SLC47A1-206ENST00000571335 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 DDB1Q16531 1140 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 IL16Q14005 1332 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
SLC47A1-206ENST00000571335 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.53
SLC47A1-206ENST00000571335 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.53
SLC47A1-206ENST00000571335 LGR6Q9HBX8 967 aa18.33■□□□□ 0.53
SLC47A1-206ENST00000571335 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.53
SLC47A1-206ENST00000571335 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 HSP90AB1P08238 724 aaKnown RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 NKX1-1Q15270 411 aaPredicted RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 RGS17Q9UGC6 210 aaPredicted RBP18.32■□□□□ 0.52
SLC47A1-206ENST00000571335 E9PSI1 815 aa18.31■□□□□ 0.52
SLC47A1-206ENST00000571335 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
SLC47A1-206ENST00000571335 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
SLC47A1-206ENST00000571335 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
SLC47A1-206ENST00000571335 IFT57Q9NWB7 429 aa18.29■□□□□ 0.52
SLC47A1-206ENST00000571335 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
SLC47A1-206ENST00000571335 GNAI1P63096 354 aa18.28■□□□□ 0.52
SLC47A1-206ENST00000571335 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
SLC47A1-206ENST00000571335 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
SLC47A1-206ENST00000571335 MRC1P22897 1456 aa18.28■□□□□ 0.52
SLC47A1-206ENST00000571335 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 A0A0G2JS52 829 aa18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 MYT1Q01538 1121 aa18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 MARCH10Q8NA82 808 aaPredicted RBP18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
SLC47A1-206ENST00000571335 CHL1O00533 1208 aa18.26■□□□□ 0.51
SLC47A1-206ENST00000571335 TEFQ10587 303 aa18.26■□□□□ 0.51
SLC47A1-206ENST00000571335 SEPT12Q8IYM1 358 aa18.26■□□□□ 0.51
SLC47A1-206ENST00000571335 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
SLC47A1-206ENST00000571335 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
SLC47A1-206ENST00000571335 TAF7Q15545 349 aaPredicted RBP18.25■□□□□ 0.51
SLC47A1-206ENST00000571335 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
SLC47A1-206ENST00000571335 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms