RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
LITAF-206ENST00000571277 LRRC4BQ9NT99 713 aa15.79■□□□□ 0.12
LITAF-206ENST00000571277 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
LITAF-206ENST00000571277 PTGER2P43116 358 aa15.78■□□□□ 0.12
LITAF-206ENST00000571277 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
LITAF-206ENST00000571277 EMILIN1Q9Y6C2 1016 aa15.78■□□□□ 0.12
LITAF-206ENST00000571277 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.12
LITAF-206ENST00000571277 ZBTB7AO95365 584 aa15.77■□□□□ 0.12
LITAF-206ENST00000571277 LY75O60449 1722 aa15.77■□□□□ 0.11
LITAF-206ENST00000571277 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
LITAF-206ENST00000571277 CGNL1Q0VF96 1302 aa15.76■□□□□ 0.11
LITAF-206ENST00000571277 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
LITAF-206ENST00000571277 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
LITAF-206ENST00000571277 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
LITAF-206ENST00000571277 PPP1R1BQ9UD71 204 aaPredicted RBP15.75■□□□□ 0.11
LITAF-206ENST00000571277 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
LITAF-206ENST00000571277 HSPA5P11021 654 aaKnown RBP15.74■□□□□ 0.11
LITAF-206ENST00000571277 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.11
LITAF-206ENST00000571277 RAPGEF4Q8WZA2 1011 aa15.74■□□□□ 0.11
LITAF-206ENST00000571277 SGIP1Q9BQI5 828 aa15.74■□□□□ 0.11
LITAF-206ENST00000571277 PKD1L3Q7Z443 1732 aa15.74■□□□□ 0.11
LITAF-206ENST00000571277 SLC27A3Q5K4L6 730 aa15.73■□□□□ 0.11
LITAF-206ENST00000571277 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
LITAF-206ENST00000571277 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
LITAF-206ENST00000571277 SYTL4Q96C24 671 aaPredicted RBP15.73■□□□□ 0.11
LITAF-206ENST00000571277 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
LITAF-206ENST00000571277 TUBGCP6Q96RT7 1819 aa15.73■□□□□ 0.11
LITAF-206ENST00000571277 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
LITAF-206ENST00000571277 TATP17735 454 aaPredicted RBP15.72■□□□□ 0.11
LITAF-206ENST00000571277 MTFR1LQ9H019 292 aa15.72■□□□□ 0.11
LITAF-206ENST00000571277 TOGARAM1Q9Y4F4 1720 aa15.71■□□□□ 0.11
LITAF-206ENST00000571277 CYP27B1O15528 508 aa15.71■□□□□ 0.11
LITAF-206ENST00000571277 KCNQ4P56696 695 aa15.71■□□□□ 0.11
LITAF-206ENST00000571277 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
LITAF-206ENST00000571277 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
LITAF-206ENST00000571277 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
LITAF-206ENST00000571277 COL24A1Q17RW2 1714 aa15.7■□□□□ 0.1
LITAF-206ENST00000571277 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
LITAF-206ENST00000571277 POLR3GLQ9BT43 218 aa15.69■□□□□ 0.1
LITAF-206ENST00000571277 EYA1Q99502 592 aa15.68■□□□□ 0.1
LITAF-206ENST00000571277 ITGB4P16144 1822 aa15.68■□□□□ 0.1
LITAF-206ENST00000571277 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
LITAF-206ENST00000571277 PANK3Q9H999 370 aa15.67■□□□□ 0.1
LITAF-206ENST00000571277 FHDC1Q9C0D6 1143 aaPredicted RBP15.66■□□□□ 0.1
LITAF-206ENST00000571277 C5P01031 1676 aa15.66■□□□□ 0.1
LITAF-206ENST00000571277 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
LITAF-206ENST00000571277 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
LITAF-206ENST00000571277 SYT17Q9BSW7 474 aa15.65■□□□□ 0.1
LITAF-206ENST00000571277 CCNL1Q9UK58 526 aaPredicted RBP15.65■□□□□ 0.1
LITAF-206ENST00000571277 TAF1LQ8IZX4 1826 aa15.65■□□□□ 0.1
LITAF-206ENST00000571277 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
LITAF-206ENST00000571277 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
LITAF-206ENST00000571277 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
LITAF-206ENST00000571277 ARXQ96QS3 562 aa15.63■□□□□ 0.09
LITAF-206ENST00000571277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
LITAF-206ENST00000571277 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
LITAF-206ENST00000571277 UTRNP46939 3433 aa15.63■□□□□ 0.09
LITAF-206ENST00000571277 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
LITAF-206ENST00000571277 MPRIPQ6WCQ1 1025 aa15.62■□□□□ 0.09
LITAF-206ENST00000571277 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
LITAF-206ENST00000571277 PIGBQ92521 554 aa15.61■□□□□ 0.09
LITAF-206ENST00000571277 IGSF1Q8N6C5 1336 aa15.61■□□□□ 0.09
LITAF-206ENST00000571277 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
LITAF-206ENST00000571277 YY1P25490 414 aa15.6■□□□□ 0.09
LITAF-206ENST00000571277 PHKG2P15735 406 aa15.59■□□□□ 0.09
LITAF-206ENST00000571277 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
LITAF-206ENST00000571277 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
LITAF-206ENST00000571277 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
LITAF-206ENST00000571277 KIF7Q2M1P5 1343 aa15.58■□□□□ 0.08
LITAF-206ENST00000571277 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
LITAF-206ENST00000571277 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
LITAF-206ENST00000571277 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
LITAF-206ENST00000571277 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
LITAF-206ENST00000571277 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
LITAF-206ENST00000571277 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
LITAF-206ENST00000571277 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
LITAF-206ENST00000571277 POLD1P28340 1107 aa15.55■□□□□ 0.08
LITAF-206ENST00000571277 ASAP1Q9ULH1 1129 aa15.55■□□□□ 0.08
LITAF-206ENST00000571277 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
LITAF-206ENST00000571277 KDRP35968 1356 aa15.53■□□□□ 0.08
LITAF-206ENST00000571277 LOC102724428A0A0B4J2F2 783 aa15.53■□□□□ 0.08
LITAF-206ENST00000571277 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
LITAF-206ENST00000571277 HMGB2P26583 209 aaKnown RBP15.53■□□□□ 0.08
LITAF-206ENST00000571277 SIK1P57059 783 aa15.53■□□□□ 0.08
LITAF-206ENST00000571277 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
LITAF-206ENST00000571277 CHD4Q14839 1912 aa15.53■□□□□ 0.08
LITAF-206ENST00000571277 KDM6AO15550 1401 aaPredicted RBP15.52■□□□□ 0.08
LITAF-206ENST00000571277 ZNF831Q5JPB2 1677 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 MSH5O43196 834 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 ITPK1Q13572 414 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 MSL1Q68DK7 614 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 LINC00116Q8NCU8 138 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 FLAD1Q8NFF5 587 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 ATG3Q9NT62 314 aa15.52■□□□□ 0.08
LITAF-206ENST00000571277 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
LITAF-206ENST00000571277 IL13P35225 146 aa15.51■□□□□ 0.07
LITAF-206ENST00000571277 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
LITAF-206ENST00000571277 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
LITAF-206ENST00000571277 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
LITAF-206ENST00000571277 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms