RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 PTK2Q05397 1052 aa9.64□□□□□ -0.87
SIN3A-213ENST00000570021 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
SIN3A-213ENST00000570021 FANCD2Q9BXW9 1451 aa9.64□□□□□ -0.87
SIN3A-213ENST00000570021 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
SIN3A-213ENST00000570021 KRTAP4-8Q9BYQ9 185 aa9.63□□□□□ -0.87
SIN3A-213ENST00000570021 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
SIN3A-213ENST00000570021 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
SIN3A-213ENST00000570021 SRSF11Q05519 484 aaKnown RBP9.62□□□□□ -0.87
SIN3A-213ENST00000570021 NR6A1Q15406 480 aa9.62□□□□□ -0.87
SIN3A-213ENST00000570021 OCSTAMPQ9BR26 566 aa9.62□□□□□ -0.87
SIN3A-213ENST00000570021 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
SIN3A-213ENST00000570021 ADH1AP07327 375 aa9.61□□□□□ -0.87
SIN3A-213ENST00000570021 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
SIN3A-213ENST00000570021 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
SIN3A-213ENST00000570021 ADAM32Q8TC27 787 aa9.61□□□□□ -0.87
SIN3A-213ENST00000570021 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
SIN3A-213ENST00000570021 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
SIN3A-213ENST00000570021 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
SIN3A-213ENST00000570021 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
SIN3A-213ENST00000570021 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
SIN3A-213ENST00000570021 PTGIRP43119 386 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 RAB15P59190 212 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 GAS6Q14393 721 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 ENAMQ9NRM1 1142 aa9.58□□□□□ -0.88
SIN3A-213ENST00000570021 LILRA1O75019 489 aa9.57□□□□□ -0.88
SIN3A-213ENST00000570021 ADD1P35611 737 aaKnown RBP9.57□□□□□ -0.88
SIN3A-213ENST00000570021 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
SIN3A-213ENST00000570021 KDF1Q8NAX2 398 aaPredicted RBP9.56□□□□□ -0.88
SIN3A-213ENST00000570021 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
SIN3A-213ENST00000570021 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
SIN3A-213ENST00000570021 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
SIN3A-213ENST00000570021 CFTRP13569 1480 aa9.54□□□□□ -0.88
SIN3A-213ENST00000570021 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
SIN3A-213ENST00000570021 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
SIN3A-213ENST00000570021 XP32Q5T750 250 aa9.53□□□□□ -0.88
SIN3A-213ENST00000570021 FBXO31Q5XUX0 539 aaPredicted RBP9.53□□□□□ -0.88
SIN3A-213ENST00000570021 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
SIN3A-213ENST00000570021 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
SIN3A-213ENST00000570021 WIZO95785 1651 aa9.52□□□□□ -0.89
SIN3A-213ENST00000570021 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
SIN3A-213ENST00000570021 ESPNB1AK53 854 aa9.52□□□□□ -0.89
SIN3A-213ENST00000570021 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
SIN3A-213ENST00000570021 PRICKLE2Q7Z3G6 844 aa9.52□□□□□ -0.89
SIN3A-213ENST00000570021 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
SIN3A-213ENST00000570021 ZNF837Q96EG3 531 aaPredicted RBP9.52□□□□□ -0.89
SIN3A-213ENST00000570021 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
SIN3A-213ENST00000570021 AP1G2O75843 785 aa9.51□□□□□ -0.89
SIN3A-213ENST00000570021 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
SIN3A-213ENST00000570021 FOXR1Q6PIV2 292 aa9.51□□□□□ -0.89
SIN3A-213ENST00000570021 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
SIN3A-213ENST00000570021 MSTNO14793 375 aa9.5□□□□□ -0.89
SIN3A-213ENST00000570021 RHOQP17081 205 aa9.5□□□□□ -0.89
SIN3A-213ENST00000570021 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
SIN3A-213ENST00000570021 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
SIN3A-213ENST00000570021 EPS8L1Q8TE68 723 aa9.5□□□□□ -0.89
SIN3A-213ENST00000570021 CYLDQ9NQC7 956 aa9.5□□□□□ -0.89
SIN3A-213ENST00000570021 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
SIN3A-213ENST00000570021 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
SIN3A-213ENST00000570021 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
SIN3A-213ENST00000570021 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
SIN3A-213ENST00000570021 IGF1RP08069 1367 aa9.49□□□□□ -0.89
SIN3A-213ENST00000570021 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-213ENST00000570021 GPR25O00155 361 aa9.48□□□□□ -0.89
SIN3A-213ENST00000570021 PODNQ7Z5L7 613 aa9.48□□□□□ -0.89
SIN3A-213ENST00000570021 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-213ENST00000570021 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
SIN3A-213ENST00000570021 BCRP11274 1271 aa9.47□□□□□ -0.89
SIN3A-213ENST00000570021 GPC1P35052 558 aa9.47□□□□□ -0.89
SIN3A-213ENST00000570021 RIPOR1Q6ZS17 1223 aa9.47□□□□□ -0.89
SIN3A-213ENST00000570021 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
SIN3A-213ENST00000570021 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 H7C1W4 665 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 USP17L8P0C7I0 530 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 DBN1Q16643 649 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 NEDD1Q8NHV4 660 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 SPOCK3Q9BQ16 436 aa9.46□□□□□ -0.9
SIN3A-213ENST00000570021 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.9
SIN3A-213ENST00000570021 ADAM23O75077 832 aa9.45□□□□□ -0.9
SIN3A-213ENST00000570021 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
SIN3A-213ENST00000570021 DYRK1BQ9Y463 629 aa9.45□□□□□ -0.9
SIN3A-213ENST00000570021 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
SIN3A-213ENST00000570021 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
SIN3A-213ENST00000570021 LRRC4BQ9NT99 713 aa9.44□□□□□ -0.9
SIN3A-213ENST00000570021 CHD1O14646 1710 aa9.44□□□□□ -0.9
SIN3A-213ENST00000570021 MEN1O00255 615 aa9.43□□□□□ -0.9
SIN3A-213ENST00000570021 ITGB2P05107 769 aa9.43□□□□□ -0.9
SIN3A-213ENST00000570021 GTPBP3Q969Y2 492 aaKnown RBP9.43□□□□□ -0.9
SIN3A-213ENST00000570021 ACDQ96AP0 544 aa9.43□□□□□ -0.9
SIN3A-213ENST00000570021 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
SIN3A-213ENST00000570021 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
SIN3A-213ENST00000570021 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
SIN3A-213ENST00000570021 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
SIN3A-213ENST00000570021 GAS2L1Q99501 681 aaPredicted RBP9.41□□□□□ -0.9
SIN3A-213ENST00000570021 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
SIN3A-213ENST00000570021 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
SIN3A-213ENST00000570021 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
SIN3A-213ENST00000570021 PROCP04070 461 aa9.4□□□□□ -0.9
SIN3A-213ENST00000570021 MX2P20592 715 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms