RNA–Protein interactions for RNA: ENST00000567306.5

PDXDC1-215, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-215ENST00000567306 DLG5Q8TDM6 1919 aa9.8□□□□□ -0.84
PDXDC1-215ENST00000567306 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
PDXDC1-215ENST00000567306 RIPK4P57078 832 aa9.8□□□□□ -0.84
PDXDC1-215ENST00000567306 LRRC37A3O60309 1634 aa9.8□□□□□ -0.84
PDXDC1-215ENST00000567306 COL14A1Q05707 1796 aaKnown RBP9.8□□□□□ -0.84
PDXDC1-215ENST00000567306 NEFMP07197 916 aa9.79□□□□□ -0.84
PDXDC1-215ENST00000567306 SLFN5Q08AF3 891 aa9.79□□□□□ -0.84
PDXDC1-215ENST00000567306 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
PDXDC1-215ENST00000567306 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
PDXDC1-215ENST00000567306 PLCH1Q4KWH8 1693 aa9.79□□□□□ -0.84
PDXDC1-215ENST00000567306 MEGF6O75095 1541 aa9.78□□□□□ -0.84
PDXDC1-215ENST00000567306 E9PSI1 815 aa9.78□□□□□ -0.84
PDXDC1-215ENST00000567306 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
PDXDC1-215ENST00000567306 THUMPD2Q9BTF0 503 aaKnown RBP9.78□□□□□ -0.84
PDXDC1-215ENST00000567306 NRAPQ86VF7 1730 aa9.77□□□□□ -0.85
PDXDC1-215ENST00000567306 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
PDXDC1-215ENST00000567306 MTHFSDQ2M296 383 aaKnown RBP9.77□□□□□ -0.85
PDXDC1-215ENST00000567306 CSB-PGBD3P0DP91 1061 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 IL16Q14005 1332 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 WDR17Q8IZU2 1322 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
PDXDC1-215ENST00000567306 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 LRP6O75581 1613 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 GAS2L2Q8NHY3 880 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 SUPT16HQ9Y5B9 1047 aaKnown RBP9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 PARP4Q9UKK3 1724 aaKnown RBP9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 JCADQ9P266 1359 aa9.75□□□□□ -0.85
PDXDC1-215ENST00000567306 CRB1P82279 1406 aa9.74□□□□□ -0.85
PDXDC1-215ENST00000567306 MCM10Q7L590 875 aa9.74□□□□□ -0.85
PDXDC1-215ENST00000567306 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
PDXDC1-215ENST00000567306 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 LARP1Q6PKG0 1096 aaKnown RBP9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 STRN4Q9NRL3 753 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 BTG4Q9NY30 223 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 ADAMTS7Q9UKP4 1686 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
PDXDC1-215ENST00000567306 WNK3Q9BYP7 1800 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 ZNF853P0CG23 659 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 HSPA1LP34931 641 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 SHANK3Q9BYB0 1731 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 NWD2Q9ULI1 1742 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 SLIT2O94813 1529 aa9.72□□□□□ -0.85
PDXDC1-215ENST00000567306 GNAT3A8MTJ3 354 aa9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 IRX6P78412 446 aaPredicted RBP9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 AMOTQ4VCS5 1084 aa9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 RAPGEF4Q8WZA2 1011 aa9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 LAS1LQ9Y4W2 734 aaKnown RBP9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 DISP2A7MBM2 1401 aa9.71□□□□□ -0.86
PDXDC1-215ENST00000567306 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 EVA1CP58658 441 aa9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 RTF1Q92541 710 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 MBIPQ9NS73 344 aa9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
PDXDC1-215ENST00000567306 GNAI1P63096 354 aa9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 EXOSC9Q06265 439 aaKnown RBP9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 SPATA31A6Q5VVP1 1343 aa9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 IL17REQ8NFR9 667 aa9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
PDXDC1-215ENST00000567306 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 SIPA1L3O60292 1781 aaPredicted RBP9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 MRC1P22897 1456 aa9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 NEFLP07196 543 aa9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 LGR6Q9HBX8 967 aa9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 KDM3BQ7LBC6 1761 aa9.68□□□□□ -0.86
PDXDC1-215ENST00000567306 CHL1O00533 1208 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 CYP27B1O15528 508 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 IL2RBP14784 551 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 PHKG2P15735 406 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 C1orf141Q5JVX7 400 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.865e-13■■■□□ 18.2
PDXDC1-215ENST00000567306 MIS18AQ9NYP9 233 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
PDXDC1-215ENST00000567306 SPG7Q9UQ90 795 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms