RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 UNC5CLQ8IV45 518 aa24.13■■□□□ 1.45
EDC3-208ENST00000565602 PKD1L3Q7Z443 1732 aa24.12■■□□□ 1.45
EDC3-208ENST00000565602 TCP11L2Q8N4U5 519 aa24.12■■□□□ 1.45
EDC3-208ENST00000565602 TRMT2AQ8IZ69 625 aaKnown RBP24.11■■□□□ 1.45
EDC3-208ENST00000565602 PNNQ9H307 717 aaKnown RBP24.11■■□□□ 1.45
EDC3-208ENST00000565602 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
EDC3-208ENST00000565602 AFF2P51816 1311 aa24.11■■□□□ 1.45
EDC3-208ENST00000565602 E9PSI1 815 aa24.1■■□□□ 1.45
EDC3-208ENST00000565602 SHANK3Q9BYB0 1731 aa24.1■■□□□ 1.45
EDC3-208ENST00000565602 WWC1Q8IX03 1113 aa24.09■■□□□ 1.45
EDC3-208ENST00000565602 USP21Q9UK80 565 aa24.09■■□□□ 1.45
EDC3-208ENST00000565602 SPATA31A1Q5TZJ5 1347 aa24.09■■□□□ 1.45
EDC3-208ENST00000565602 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
EDC3-208ENST00000565602 DISP2A7MBM2 1401 aa24.08■■□□□ 1.45
EDC3-208ENST00000565602 SPATA31A5Q5VU36 1347 aa24.08■■□□□ 1.45
EDC3-208ENST00000565602 SPATA31A7Q8IWB4 1347 aa24.08■■□□□ 1.45
EDC3-208ENST00000565602 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
EDC3-208ENST00000565602 CCDC27Q2M243 656 aa24.07■■□□□ 1.44
EDC3-208ENST00000565602 VPS72Q15906 364 aa24.07■■□□□ 1.44
EDC3-208ENST00000565602 OVOS2A0A0G2JMS6 1433 aa24.06■■□□□ 1.44
EDC3-208ENST00000565602 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
EDC3-208ENST00000565602 USP35Q9P2H5 1018 aa24.06■■□□□ 1.44
EDC3-208ENST00000565602 RRP7AQ9Y3A4 280 aaKnown RBP24.06■■□□□ 1.44
EDC3-208ENST00000565602 GLI3P10071 1580 aa24.06■■□□□ 1.44
EDC3-208ENST00000565602 PLEKHG2Q9H7P9 1386 aa24.06■■□□□ 1.44
EDC3-208ENST00000565602 TMPOP42166 694 aaKnown RBP24.05■■□□□ 1.44
EDC3-208ENST00000565602 ATRNO75882 1429 aa24.05■■□□□ 1.44
EDC3-208ENST00000565602 VIRMAQ69YN4 1812 aaKnown RBP24.05■■□□□ 1.44
EDC3-208ENST00000565602 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
EDC3-208ENST00000565602 MTHFSDQ2M296 383 aaKnown RBP24.04■■□□□ 1.44
EDC3-208ENST00000565602 RAPGEF4Q8WZA2 1011 aa24.04■■□□□ 1.44
EDC3-208ENST00000565602 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
EDC3-208ENST00000565602 ILDR1Q86SU0 546 aaPredicted RBP24.02■■□□□ 1.44
EDC3-208ENST00000565602 NEFMP07197 916 aa24.02■■□□□ 1.44
EDC3-208ENST00000565602 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
EDC3-208ENST00000565602 WDR63Q8IWG1 891 aa24.02■■□□□ 1.44
EDC3-208ENST00000565602 IL2RBP14784 551 aa24.01■■□□□ 1.43
EDC3-208ENST00000565602 THRAP3Q9Y2W1 955 aaKnown RBP24.01■■□□□ 1.43
EDC3-208ENST00000565602 LRRC37A3O60309 1634 aa24.01■■□□□ 1.43
EDC3-208ENST00000565602 THSD7AQ9UPZ6 1657 aa24■■□□□ 1.43
EDC3-208ENST00000565602 TRIM35Q9UPQ4 493 aa23.99■■□□□ 1.43
EDC3-208ENST00000565602 CCDC9Q9Y3X0 531 aaKnown RBP23.99■■□□□ 1.43
EDC3-208ENST00000565602 RIPK4P57078 832 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 AMOTQ4VCS5 1084 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 B4GALNT3Q6L9W6 998 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 GAS2L2Q8NHY3 880 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.98■■□□□ 1.432e-7■■□□□ 14.4
EDC3-208ENST00000565602 PLEKHO1Q53GL0 409 aaPredicted RBP23.98■■□□□ 1.43
EDC3-208ENST00000565602 BARGINQ6ZT62 677 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 ADAMTS7Q9UKP4 1686 aa23.98■■□□□ 1.43
EDC3-208ENST00000565602 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
EDC3-208ENST00000565602 GJD4Q96KN9 370 aaPredicted RBP23.96■■□□□ 1.43
EDC3-208ENST00000565602 SCN11AQ9UI33 1791 aa23.94■■□□□ 1.42
EDC3-208ENST00000565602 ZNF530Q6P9A1 599 aaPredicted RBP23.94■■□□□ 1.42
EDC3-208ENST00000565602 QTRT2Q9H974 415 aaKnown RBP23.94■■□□□ 1.42
EDC3-208ENST00000565602 SPG7Q9UQ90 795 aa23.94■■□□□ 1.42
EDC3-208ENST00000565602 MAP3K5Q99683 1374 aa23.94■■□□□ 1.42
EDC3-208ENST00000565602 TNS2Q63HR2 1409 aa23.94■■□□□ 1.42
EDC3-208ENST00000565602 PLIN1O60240 522 aa23.93■■□□□ 1.42
EDC3-208ENST00000565602 ZCRB1Q8TBF4 217 aaKnown RBP23.93■■□□□ 1.42
EDC3-208ENST00000565602 CDCA7Q9BWT1 371 aaPredicted RBP23.93■■□□□ 1.42
EDC3-208ENST00000565602 CYP27B1O15528 508 aa23.92■■□□□ 1.42
EDC3-208ENST00000565602 FAM98CQ17RN3 349 aaKnown RBP23.92■■□□□ 1.42
EDC3-208ENST00000565602 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.92■■□□□ 1.42
EDC3-208ENST00000565602 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
EDC3-208ENST00000565602 RGS17Q9UGC6 210 aaPredicted RBP23.92■■□□□ 1.42
EDC3-208ENST00000565602 AKAP4Q5JQC9 854 aa23.91■■□□□ 1.42
EDC3-208ENST00000565602 ZNF772Q68DY9 489 aaPredicted RBP23.91■■□□□ 1.42
EDC3-208ENST00000565602 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
EDC3-208ENST00000565602 MYH16Q9H6N6 1097 aa23.91■■□□□ 1.42
EDC3-208ENST00000565602 GNAT3A8MTJ3 354 aa23.9■■□□□ 1.42
EDC3-208ENST00000565602 PHKG2P15735 406 aa23.9■■□□□ 1.42
EDC3-208ENST00000565602 PCDH11XQ9BZA7 1347 aa23.9■■□□□ 1.42
EDC3-208ENST00000565602 PCDH11YQ9BZA8 1340 aa23.9■■□□□ 1.42
EDC3-208ENST00000565602 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
EDC3-208ENST00000565602 SIPA1L3O60292 1781 aaPredicted RBP23.9■■□□□ 1.42
EDC3-208ENST00000565602 TOGARAM1Q9Y4F4 1720 aa23.89■■□□□ 1.42
EDC3-208ENST00000565602 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.41
EDC3-208ENST00000565602 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
EDC3-208ENST00000565602 HTATSF1O43719 755 aaKnown RBP23.88■■□□□ 1.41
EDC3-208ENST00000565602 LMOD3Q0VAK6 560 aa23.88■■□□□ 1.41
EDC3-208ENST00000565602 IL16Q14005 1332 aa23.88■■□□□ 1.41
EDC3-208ENST00000565602 ONECUT3O60422 494 aaPredicted RBP23.87■■□□□ 1.41
EDC3-208ENST00000565602 MCM10Q7L590 875 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 IFNL2Q8IZJ0 200 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 C1orf141Q5JVX7 400 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 IL17REQ8NFR9 667 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 BRWD3Q6RI45 1802 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 CEMIPQ8WUJ3 1361 aa23.87■■□□□ 1.41
EDC3-208ENST00000565602 EXOC5O00471 708 aa23.85■■□□□ 1.41
EDC3-208ENST00000565602 DDB1Q16531 1140 aa23.85■■□□□ 1.41
EDC3-208ENST00000565602 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
EDC3-208ENST00000565602 CRBNQ96SW2 442 aa23.85■■□□□ 1.41
EDC3-208ENST00000565602 LGR6Q9HBX8 967 aa23.85■■□□□ 1.41
EDC3-208ENST00000565602 DDX54Q8TDD1 881 aaKnown RBP23.84■■□□□ 1.41
EDC3-208ENST00000565602 NKX1-1Q15270 411 aaPredicted RBP23.83■■□□□ 1.41
EDC3-208ENST00000565602 RTF1Q92541 710 aaKnown RBP23.83■■□□□ 1.41
EDC3-208ENST00000565602 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.41
EDC3-208ENST00000565602 FANCIQ9NVI1 1328 aa23.83■■□□□ 1.41
EDC3-208ENST00000565602 MRC1P22897 1456 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms