RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 SCTRP47872 440 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 RELBQ01201 579 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
CHD9-210ENST00000564582 UCN2Q96RP3 112 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
CHD9-210ENST00000564582 ADD1P35611 737 aaKnown RBP8.58□□□□□ -1.04
CHD9-210ENST00000564582 TSGA10IPQ3SY00 556 aa8.58□□□□□ -1.04
CHD9-210ENST00000564582 ZFP42Q96MM3 310 aa8.58□□□□□ -1.04
CHD9-210ENST00000564582 NOD1Q9Y239 953 aa8.58□□□□□ -1.04
CHD9-210ENST00000564582 PTGIRP43119 386 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 NCOA4Q13772 614 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
CHD9-210ENST00000564582 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
CHD9-210ENST00000564582 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
CHD9-210ENST00000564582 C11orf95C9JLR9 678 aaPredicted RBP8.56□□□□□ -1.04
CHD9-210ENST00000564582 SPINT1O43278 529 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 GNRH1P01148 92 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 TRIM50Q86XT4 487 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
CHD9-210ENST00000564582 TRIM47Q96LD4 638 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 PPP1R12CQ9BZL4 782 aa8.56□□□□□ -1.04
CHD9-210ENST00000564582 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
CHD9-210ENST00000564582 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
CHD9-210ENST00000564582 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
CHD9-210ENST00000564582 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
CHD9-210ENST00000564582 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
CHD9-210ENST00000564582 PCGF6Q9BYE7 350 aa8.55□□□□□ -1.04
CHD9-210ENST00000564582 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
CHD9-210ENST00000564582 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
CHD9-210ENST00000564582 ATP1A2P50993 1020 aa8.54□□□□□ -1.04
CHD9-210ENST00000564582 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
CHD9-210ENST00000564582 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
CHD9-210ENST00000564582 SERPINA10Q9UK55 444 aa8.54□□□□□ -1.04
CHD9-210ENST00000564582 MAFBQ9Y5Q3 323 aaPredicted RBP8.54□□□□□ -1.04
CHD9-210ENST00000564582 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
CHD9-210ENST00000564582 A0A1W2PRU2 124 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 ARID3CA6NKF2 412 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 MEN1O00255 615 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 MAN1A2O60476 641 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 GTF2IP78347 998 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 PSME1Q06323 249 aa8.52□□□□□ -1.05
CHD9-210ENST00000564582 KDF1Q8NAX2 398 aaPredicted RBP8.52□□□□□ -1.05
CHD9-210ENST00000564582 INSM2Q96T92 566 aaPredicted RBP8.52□□□□□ -1.05
CHD9-210ENST00000564582 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
CHD9-210ENST00000564582 CLN3Q13286 438 aa8.51□□□□□ -1.05
CHD9-210ENST00000564582 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
CHD9-210ENST00000564582 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
CHD9-210ENST00000564582 GPC1P35052 558 aa8.5□□□□□ -1.05
CHD9-210ENST00000564582 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
CHD9-210ENST00000564582 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
CHD9-210ENST00000564582 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
CHD9-210ENST00000564582 CTSOP43234 321 aaPredicted RBP8.49□□□□□ -1.05
CHD9-210ENST00000564582 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
CHD9-210ENST00000564582 CNKSR1Q969H4 720 aa8.49□□□□□ -1.05
CHD9-210ENST00000564582 ESYT1Q9BSJ8 1104 aa8.49□□□□□ -1.05
CHD9-210ENST00000564582 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
CHD9-210ENST00000564582 RAB6BQ9NRW1 208 aa8.49□□□□□ -1.05
CHD9-210ENST00000564582 CCDC180Q9P1Z9 1646 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 POTECB2RU33 542 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
CHD9-210ENST00000564582 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
CHD9-210ENST00000564582 GDF10P55107 478 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 CFAP70Q5T0N1 1121 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 LARP1Q6PKG0 1096 aaKnown RBP8.48□□□□□ -1.05
CHD9-210ENST00000564582 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 DNAAF2Q9NVR5 837 aaKnown RBP8.48□□□□□ -1.05
CHD9-210ENST00000564582 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
CHD9-210ENST00000564582 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
CHD9-210ENST00000564582 BACH1O14867 736 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 INHAP05111 366 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 RASA1P20936 1047 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 OGFOD1Q8N543 542 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 XAGE2Q96GT9 111 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 ETNK1Q9HBU6 452 aa8.47□□□□□ -1.05
CHD9-210ENST00000564582 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
CHD9-210ENST00000564582 IL2RAP01589 272 aa8.46□□□□□ -1.06
CHD9-210ENST00000564582 RFX1P22670 979 aa8.46□□□□□ -1.06
CHD9-210ENST00000564582 FOXD4L5Q5VV16 416 aaPredicted RBP8.46□□□□□ -1.06
CHD9-210ENST00000564582 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.06
CHD9-210ENST00000564582 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
CHD9-210ENST00000564582 SCNN1DP51172 638 aa8.45□□□□□ -1.06
CHD9-210ENST00000564582 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
CHD9-210ENST00000564582 CLDN10P78369 228 aa8.44□□□□□ -1.06
CHD9-210ENST00000564582 CENPCQ03188 943 aa8.44□□□□□ -1.06
CHD9-210ENST00000564582 TLR1Q15399 786 aa8.44□□□□□ -1.06
CHD9-210ENST00000564582 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
CHD9-210ENST00000564582 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms