RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 ERVK-9P63128 1117 aa5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 TSGA10IPQ3SY00 556 aa5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 RNFT1Q5M7Z0 435 aa5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 CC2D2BQ6DHV5 1058 aa5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 CDCA7Q9BWT1 371 aaPredicted RBP5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 CUEDC1Q9NWM3 386 aaPredicted RBP5.95□□□□□ -1.46
SUB1P3-201ENST00000564581 IRF5Q13568 498 aa5.94□□□□□ -1.46
SUB1P3-201ENST00000564581 LYSMD3Q7Z3D4 306 aa5.94□□□□□ -1.46
SUB1P3-201ENST00000564581 OSBPL3Q9H4L5 887 aa5.94□□□□□ -1.46
SUB1P3-201ENST00000564581 CEP126Q9P2H0 1117 aa5.94□□□□□ -1.46
SUB1P3-201ENST00000564581 RNF144AP50876 292 aaPredicted RBP5.93□□□□□ -1.46
SUB1P3-201ENST00000564581 RNF20Q5VTR2 975 aa5.93□□□□□ -1.46
SUB1P3-201ENST00000564581 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
SUB1P3-201ENST00000564581 CCDC85AQ96PX6 553 aaPredicted RBP5.93□□□□□ -1.46
SUB1P3-201ENST00000564581 RAB6BQ9NRW1 208 aa5.93□□□□□ -1.46
SUB1P3-201ENST00000564581 SOCS7O14512 581 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 VAC14Q08AM6 782 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 POU4F2Q12837 409 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 SV2AQ7L0J3 742 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 GDPD2Q9HCC8 539 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 ARHGEF10LQ9HCE6 1279 aa5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 ZNF330Q9Y3S2 320 aaPredicted RBP5.92□□□□□ -1.46
SUB1P3-201ENST00000564581 FAM181BA6NEQ2 426 aa5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 APBB1O00213 710 aa5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 TRAK2O60296 914 aa5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 STAU1O95793 577 aaKnown RBP5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 ABL2P42684 1182 aa5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 MCCD1P59942 119 aaPredicted RBP5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 WHAMMQ8TF30 809 aa5.91□□□□□ -1.46
SUB1P3-201ENST00000564581 SLC27A3Q5K4L6 730 aa5.9□□□□□ -1.46
SUB1P3-201ENST00000564581 CYP2U1Q7Z449 544 aa5.9□□□□□ -1.46
SUB1P3-201ENST00000564581 NLRP3Q96P20 1036 aa5.9□□□□□ -1.46
SUB1P3-201ENST00000564581 GPR25O00155 361 aa5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 CLN3Q13286 438 aa5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 PHTF2Q8N3S3 785 aa5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 GAS2L1Q99501 681 aaPredicted RBP5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 GRIP2Q9C0E4 1043 aa5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 ESF1Q9H501 851 aaKnown RBP5.89□□□□□ -1.47
SUB1P3-201ENST00000564581 IL2RAP01589 272 aa5.88□□□□□ -1.47
SUB1P3-201ENST00000564581 DBN1Q16643 649 aa5.88□□□□□ -1.47
SUB1P3-201ENST00000564581 ZNF385CQ66K41 422 aaPredicted RBP5.88□□□□□ -1.47
SUB1P3-201ENST00000564581 CCDC125Q86Z20 511 aa5.88□□□□□ -1.47
SUB1P3-201ENST00000564581 GPC1P35052 558 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 PHKA2P46019 1235 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 EIF4G2P78344 907 aaKnown RBP eCLIP5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 GAS6Q14393 721 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 NBPF10Q6P3W6 841 aaKnown RBP5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 NBPF15Q8N660 670 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 CNKSR1Q969H4 720 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 TRIM52Q96A61 297 aa5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 ZNF837Q96EG3 531 aaPredicted RBP5.87□□□□□ -1.47
SUB1P3-201ENST00000564581 MYCP01106 439 aaPredicted RBP5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 CENPCQ03188 943 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 MCM6Q14566 821 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 SLFNL1Q499Z3 407 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 RNF135Q8IUD6 432 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 ADAMTS8Q9UP79 889 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 DOLKQ9UPQ8 538 aa5.86□□□□□ -1.47
SUB1P3-201ENST00000564581 ADAMTS2O95450 1211 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 GNRH1P01148 92 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 SLURP2P0DP57 97 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 TRIM22Q8IYM9 498 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 SVOPQ8N4V2 548 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 GTPBP3Q969Y2 492 aaKnown RBP5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 ESYT1Q9BSJ8 1104 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 TIMMDC1Q9NPL8 285 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 DYRK1BQ9Y463 629 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 HRH3Q9Y5N1 445 aa5.85□□□□□ -1.47
SUB1P3-201ENST00000564581 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 WASLO00401 505 aaPredicted RBP5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 LYPD4Q6UWN0 246 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 TAS1R3Q7RTX0 852 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 XAGE2Q96GT9 111 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 ETNK1Q9HBU6 452 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 GPAMQ9HCL2 828 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 COG6Q9Y2V7 657 aa5.84□□□□□ -1.47
SUB1P3-201ENST00000564581 PIK3CDO00329 1044 aa5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 THBS1P07996 1170 aa5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 GSK3AP49840 483 aa5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 USP4Q13107 963 aa5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 FHDC1Q9C0D6 1143 aaPredicted RBP5.83□□□□□ -1.48
SUB1P3-201ENST00000564581 ARHGEF15O94989 841 aa5.82□□□□□ -1.48
SUB1P3-201ENST00000564581 SEMA3FQ13275 785 aa5.82□□□□□ -1.48
SUB1P3-201ENST00000564581 C4orf17Q53FE4 359 aa5.82□□□□□ -1.48
SUB1P3-201ENST00000564581 PLPP7Q8NBV4 271 aa5.82□□□□□ -1.48
SUB1P3-201ENST00000564581 CHIC2Q9UKJ5 165 aa5.82□□□□□ -1.48
SUB1P3-201ENST00000564581 F11P03951 625 aa5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 CELA2BP08218 269 aaPredicted RBP5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 SRSF11Q05519 484 aaKnown RBP5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 WASHC4Q2M389 1173 aa5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 TMEM214Q6NUQ4 689 aaKnown RBP5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 NUCKS1Q9H1E3 243 aaKnown RBP5.81□□□□□ -1.48
SUB1P3-201ENST00000564581 IGF1RP08069 1367 aa5.8□□□□□ -1.48
SUB1P3-201ENST00000564581 H7C1W4 665 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms