RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 ANKRD26Q9UPS8 1709 aa21.93■■□□□ 1.1
LPCAT4-205ENST00000563748 PAPPAQ13219 1627 aa21.92■■□□□ 1.1
LPCAT4-205ENST00000563748 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
LPCAT4-205ENST00000563748 DOT1LQ8TEK3 1739 aa21.92■■□□□ 1.1
LPCAT4-205ENST00000563748 INSRP06213 1382 aa21.92■■□□□ 1.1
LPCAT4-205ENST00000563748 FLT4P35916 1363 aa21.92■■□□□ 1.1
LPCAT4-205ENST00000563748 HSPA5P11021 654 aaKnown RBP21.91■■□□□ 1.1
LPCAT4-205ENST00000563748 DDX54Q8TDD1 881 aaKnown RBP21.91■■□□□ 1.1
LPCAT4-205ENST00000563748 NBPF6Q5VWK0 638 aa21.9■■□□□ 1.1
LPCAT4-205ENST00000563748 NBPF4Q96M43 638 aa21.9■■□□□ 1.1
LPCAT4-205ENST00000563748 SPON1Q9HCB6 807 aa21.9■■□□□ 1.1
LPCAT4-205ENST00000563748 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
LPCAT4-205ENST00000563748 ZCRB1Q8TBF4 217 aaKnown RBP21.87■■□□□ 1.09
LPCAT4-205ENST00000563748 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
LPCAT4-205ENST00000563748 MAP2P11137 1827 aaKnown RBP21.87■■□□□ 1.09
LPCAT4-205ENST00000563748 SLC15A2Q16348 729 aa21.87■■□□□ 1.09
LPCAT4-205ENST00000563748 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
LPCAT4-205ENST00000563748 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
LPCAT4-205ENST00000563748 PDGFDQ9GZP0 370 aaPredicted RBP21.86■■□□□ 1.09
LPCAT4-205ENST00000563748 EMILIN1Q9Y6C2 1016 aa21.85■■□□□ 1.09
LPCAT4-205ENST00000563748 LY75O60449 1722 aa21.84■■□□□ 1.09
LPCAT4-205ENST00000563748 RAPGEF4Q8WZA2 1011 aa21.84■■□□□ 1.09
LPCAT4-205ENST00000563748 NSD2O96028 1365 aa21.83■■□□□ 1.09
LPCAT4-205ENST00000563748 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
LPCAT4-205ENST00000563748 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.08
LPCAT4-205ENST00000563748 QSER1Q2KHR3 1735 aa21.82■■□□□ 1.08
LPCAT4-205ENST00000563748 PKD1L3Q7Z443 1732 aa21.82■■□□□ 1.08
LPCAT4-205ENST00000563748 POLR3GLQ9BT43 218 aa21.82■■□□□ 1.08
LPCAT4-205ENST00000563748 PPP1R1BQ9UD71 204 aaPredicted RBP21.82■■□□□ 1.08
LPCAT4-205ENST00000563748 PRIM1P49642 420 aaKnown RBP21.81■■□□□ 1.08
LPCAT4-205ENST00000563748 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
LPCAT4-205ENST00000563748 ZBTB7AO95365 584 aa21.8■■□□□ 1.08
LPCAT4-205ENST00000563748 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
LPCAT4-205ENST00000563748 SLC27A3Q5K4L6 730 aa21.79■■□□□ 1.08
LPCAT4-205ENST00000563748 SYTL4Q96C24 671 aaPredicted RBP21.79■■□□□ 1.08
LPCAT4-205ENST00000563748 TUBGCP6Q96RT7 1819 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 PPM1GO15355 546 aaPredicted RBP21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 PTGER2P43116 358 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
LPCAT4-205ENST00000563748 POLKQ9UBT6 870 aa21.76■■□□□ 1.07
LPCAT4-205ENST00000563748 MTFR1LQ9H019 292 aa21.75■■□□□ 1.07
LPCAT4-205ENST00000563748 ATF5Q9Y2D1 282 aaPredicted RBP21.75■■□□□ 1.07
LPCAT4-205ENST00000563748 ITGB4P16144 1822 aa21.75■■□□□ 1.07
LPCAT4-205ENST00000563748 AKT1S1Q96B36 256 aa21.74■■□□□ 1.07
LPCAT4-205ENST00000563748 PANK3Q9H999 370 aa21.74■■□□□ 1.07
LPCAT4-205ENST00000563748 CYP27B1O15528 508 aa21.73■■□□□ 1.07
LPCAT4-205ENST00000563748 SGIP1Q9BQI5 828 aa21.73■■□□□ 1.07
LPCAT4-205ENST00000563748 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
LPCAT4-205ENST00000563748 KCNQ4P56696 695 aa21.71■■□□□ 1.07
LPCAT4-205ENST00000563748 EYA1Q99502 592 aa21.71■■□□□ 1.07
LPCAT4-205ENST00000563748 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
LPCAT4-205ENST00000563748 C5P01031 1676 aa21.7■■□□□ 1.06
LPCAT4-205ENST00000563748 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
LPCAT4-205ENST00000563748 EIF4A2Q14240 407 aaKnown RBP21.68■■□□□ 1.06
LPCAT4-205ENST00000563748 CCNL1Q9UK58 526 aaPredicted RBP21.68■■□□□ 1.06
LPCAT4-205ENST00000563748 PNPLA7Q6ZV29 1317 aa21.67■■□□□ 1.06
LPCAT4-205ENST00000563748 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
LPCAT4-205ENST00000563748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.064e-9■■■■□ 19.5
LPCAT4-205ENST00000563748 SPG7Q9UQ90 795 aa21.67■■□□□ 1.06
LPCAT4-205ENST00000563748 SLC16A10Q8TF71 515 aa21.66■■□□□ 1.06
LPCAT4-205ENST00000563748 PLEKHG2Q9H7P9 1386 aa21.66■■□□□ 1.06
LPCAT4-205ENST00000563748 KIF7Q2M1P5 1343 aa21.66■■□□□ 1.06
LPCAT4-205ENST00000563748 TFCP2L1Q9NZI6 479 aa21.65■■□□□ 1.06
LPCAT4-205ENST00000563748 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.06
LPCAT4-205ENST00000563748 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.06
LPCAT4-205ENST00000563748 PALLDQ8WX93 1383 aa21.64■■□□□ 1.06
LPCAT4-205ENST00000563748 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.05
LPCAT4-205ENST00000563748 MAP3K5Q99683 1374 aa21.62■■□□□ 1.05
LPCAT4-205ENST00000563748 DCAF8L1A6NGE4 600 aa21.62■■□□□ 1.05
LPCAT4-205ENST00000563748 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
LPCAT4-205ENST00000563748 ARXQ96QS3 562 aa21.62■■□□□ 1.05
LPCAT4-205ENST00000563748 SYT17Q9BSW7 474 aa21.61■■□□□ 1.05
LPCAT4-205ENST00000563748 KNSTRNQ9Y448 316 aa21.61■■□□□ 1.05
LPCAT4-205ENST00000563748 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
LPCAT4-205ENST00000563748 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
LPCAT4-205ENST00000563748 PHKG2P15735 406 aa21.6■■□□□ 1.05
LPCAT4-205ENST00000563748 PIGBQ92521 554 aa21.6■■□□□ 1.05
LPCAT4-205ENST00000563748 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
LPCAT4-205ENST00000563748 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
LPCAT4-205ENST00000563748 PRKRIP1Q9H875 184 aaPredicted RBP21.59■■□□□ 1.05
LPCAT4-205ENST00000563748 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.04
LPCAT4-205ENST00000563748 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
LPCAT4-205ENST00000563748 POLD1P28340 1107 aa21.56■■□□□ 1.04
LPCAT4-205ENST00000563748 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
LPCAT4-205ENST00000563748 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
LPCAT4-205ENST00000563748 YY1P25490 414 aa21.55■■□□□ 1.04
LPCAT4-205ENST00000563748 TMOD3Q9NYL9 352 aa21.55■■□□□ 1.04
LPCAT4-205ENST00000563748 PLEKHO1Q53GL0 409 aaPredicted RBP21.52■■□□□ 1.04
LPCAT4-205ENST00000563748 FLAD1Q8NFF5 587 aa21.52■■□□□ 1.04
LPCAT4-205ENST00000563748 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 KDRP35968 1356 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 LOC102724428A0A0B4J2F2 783 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 PER1O15534 1290 aaPredicted RBP21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 MSH5O43196 834 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 SIK1P57059 783 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 AEBP1Q8IUX7 1158 aa21.51■■□□□ 1.03
LPCAT4-205ENST00000563748 ASAP1Q9ULH1 1129 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms