RNA–Protein interactions for RNA: ENST00000563640.1

CBFA2T3-204, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-204ENST00000563640 DDX54Q8TDD1 881 aaKnown RBP21.73■■□□□ 1.07
CBFA2T3-204ENST00000563640 TUBGCP6Q96RT7 1819 aa21.72■■□□□ 1.07
CBFA2T3-204ENST00000563640 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
CBFA2T3-204ENST00000563640 NSD2O96028 1365 aa21.72■■□□□ 1.07
CBFA2T3-204ENST00000563640 LY75O60449 1722 aa21.72■■□□□ 1.07
CBFA2T3-204ENST00000563640 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
CBFA2T3-204ENST00000563640 EIF4G2P78344 907 aaKnown RBP eCLIP21.71■■□□□ 1.073e-7■■■■■ 53.5
CBFA2T3-204ENST00000563640 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
CBFA2T3-204ENST00000563640 KIF24Q5T7B8 1368 aa21.71■■□□□ 1.07
CBFA2T3-204ENST00000563640 SMG6Q86US8 1419 aaKnown RBP21.71■■□□□ 1.07
CBFA2T3-204ENST00000563640 NCAPD2Q15021 1401 aa21.69■■□□□ 1.06
CBFA2T3-204ENST00000563640 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
CBFA2T3-204ENST00000563640 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
CBFA2T3-204ENST00000563640 LRRC4BQ9NT99 713 aa21.67■■□□□ 1.06
CBFA2T3-204ENST00000563640 ITGB4P16144 1822 aa21.66■■□□□ 1.06
CBFA2T3-204ENST00000563640 QSER1Q2KHR3 1735 aa21.65■■□□□ 1.06
CBFA2T3-204ENST00000563640 PRIM1P49642 420 aaKnown RBP21.64■■□□□ 1.05
CBFA2T3-204ENST00000563640 SLC15A2Q16348 729 aa21.64■■□□□ 1.05
CBFA2T3-204ENST00000563640 ZNF827Q17R98 1081 aa21.64■■□□□ 1.05
CBFA2T3-204ENST00000563640 SPON1Q9HCB6 807 aa21.64■■□□□ 1.05
CBFA2T3-204ENST00000563640 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
CBFA2T3-204ENST00000563640 STK32BQ9NY57 414 aa21.63■■□□□ 1.05
CBFA2T3-204ENST00000563640 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
CBFA2T3-204ENST00000563640 ZBTB7AO95365 584 aa21.62■■□□□ 1.05
CBFA2T3-204ENST00000563640 KCNQ4P56696 695 aa21.62■■□□□ 1.05
CBFA2T3-204ENST00000563640 RAPGEF4Q8WZA2 1011 aa21.62■■□□□ 1.05
CBFA2T3-204ENST00000563640 PANK3Q9H999 370 aa21.62■■□□□ 1.05
CBFA2T3-204ENST00000563640 SYTL4Q96C24 671 aaPredicted RBP21.61■■□□□ 1.05
CBFA2T3-204ENST00000563640 WASHC2AQ641Q2 1341 aa21.6■■□□□ 1.05
CBFA2T3-204ENST00000563640 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
CBFA2T3-204ENST00000563640 UTRNP46939 3433 aa21.59■■□□□ 1.05
CBFA2T3-204ENST00000563640 CYP27B1O15528 508 aa21.59■■□□□ 1.05
CBFA2T3-204ENST00000563640 TATP17735 454 aaPredicted RBP21.59■■□□□ 1.05
CBFA2T3-204ENST00000563640 PTGER2P43116 358 aa21.59■■□□□ 1.05
CBFA2T3-204ENST00000563640 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
CBFA2T3-204ENST00000563640 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 C5P01031 1676 aa21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 EYA1Q99502 592 aa21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 ATF5Q9Y2D1 282 aaPredicted RBP21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 COL24A1Q17RW2 1714 aa21.57■■□□□ 1.04
CBFA2T3-204ENST00000563640 AKT1S1Q96B36 256 aa21.56■■□□□ 1.04
CBFA2T3-204ENST00000563640 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
CBFA2T3-204ENST00000563640 SGIP1Q9BQI5 828 aa21.55■■□□□ 1.04
CBFA2T3-204ENST00000563640 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
CBFA2T3-204ENST00000563640 GOLGB1Q14789 3259 aaKnown RBP21.54■■□□□ 1.04
CBFA2T3-204ENST00000563640 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
CBFA2T3-204ENST00000563640 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
CBFA2T3-204ENST00000563640 PNPLA7Q6ZV29 1317 aa21.51■■□□□ 1.03
CBFA2T3-204ENST00000563640 MTFR1LQ9H019 292 aa21.5■■□□□ 1.03
CBFA2T3-204ENST00000563640 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
CBFA2T3-204ENST00000563640 IGSF1Q8N6C5 1336 aa21.49■■□□□ 1.03
CBFA2T3-204ENST00000563640 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
CBFA2T3-204ENST00000563640 NKX1-1Q15270 411 aaPredicted RBP21.47■■□□□ 1.03
CBFA2T3-204ENST00000563640 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
CBFA2T3-204ENST00000563640 MPRIPQ6WCQ1 1025 aa21.47■■□□□ 1.03
CBFA2T3-204ENST00000563640 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
CBFA2T3-204ENST00000563640 UBR3Q6ZT12 1888 aa21.46■■□□□ 1.03
CBFA2T3-204ENST00000563640 MORC1Q86VD1 984 aa21.45■■□□□ 1.02
CBFA2T3-204ENST00000563640 PIGBQ92521 554 aa21.44■■□□□ 1.02
CBFA2T3-204ENST00000563640 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
CBFA2T3-204ENST00000563640 SPG7Q9UQ90 795 aa21.44■■□□□ 1.02
CBFA2T3-204ENST00000563640 PHKG2P15735 406 aa21.43■■□□□ 1.02
CBFA2T3-204ENST00000563640 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
CBFA2T3-204ENST00000563640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.02
CBFA2T3-204ENST00000563640 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
CBFA2T3-204ENST00000563640 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
CBFA2T3-204ENST00000563640 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
CBFA2T3-204ENST00000563640 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
CBFA2T3-204ENST00000563640 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
CBFA2T3-204ENST00000563640 PLEKHG2Q9H7P9 1386 aa21.4■■□□□ 1.02
CBFA2T3-204ENST00000563640 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
CBFA2T3-204ENST00000563640 SYT17Q9BSW7 474 aa21.4■■□□□ 1.02
CBFA2T3-204ENST00000563640 COL23A1Q86Y22 540 aaPredicted RBP21.39■■□□□ 1.01
CBFA2T3-204ENST00000563640 ARXQ96QS3 562 aa21.39■■□□□ 1.01
CBFA2T3-204ENST00000563640 IFNL2Q8IZJ0 200 aa21.38■■□□□ 1.01
CBFA2T3-204ENST00000563640 KDRP35968 1356 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 MAP3K5Q99683 1374 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 IL13P35225 146 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 SLC16A10Q8TF71 515 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 ASAP1Q9ULH1 1129 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
CBFA2T3-204ENST00000563640 COL5A3P25940 1745 aaPredicted RBP21.36■■□□□ 1.01
CBFA2T3-204ENST00000563640 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
CBFA2T3-204ENST00000563640 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
CBFA2T3-204ENST00000563640 LINC00116Q8NCU8 138 aa21.34■■□□□ 1.01
CBFA2T3-204ENST00000563640 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
CBFA2T3-204ENST00000563640 ZNF831Q5JPB2 1677 aa21.34■■□□□ 1.01
CBFA2T3-204ENST00000563640 LOC102724428A0A0B4J2F2 783 aa21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 SIK1P57059 783 aa21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 ITPK1Q13572 414 aa21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 CC2D1BQ5T0F9 858 aaKnown RBP21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 MSL1Q68DK7 614 aa21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
CBFA2T3-204ENST00000563640 CHD4Q14839 1912 aa21.33■■□□□ 1
CBFA2T3-204ENST00000563640 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
CBFA2T3-204ENST00000563640 MTHFSP49914 203 aa21.32■■□□□ 1
CBFA2T3-204ENST00000563640 SULT6B1Q6IMI4 303 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms