RNA–Protein interactions for RNA: ENST00000562940.6

MTHFSD-209, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 1 (best)

Gene MTHFSD, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-209ENST00000562940 VPS72Q15906 364 aa18.65■□□□□ 0.58
MTHFSD-209ENST00000562940 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
MTHFSD-209ENST00000562940 TRPC5Q9UL62 973 aaPredicted RBP18.65■□□□□ 0.58
MTHFSD-209ENST00000562940 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
MTHFSD-209ENST00000562940 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.58
MTHFSD-209ENST00000562940 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
MTHFSD-209ENST00000562940 TMPOP42166 694 aaKnown RBP18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
MTHFSD-209ENST00000562940 A0A0G2JS52 829 aa18.62■□□□□ 0.57
MTHFSD-209ENST00000562940 MYT1Q01538 1121 aa18.62■□□□□ 0.57
MTHFSD-209ENST00000562940 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
MTHFSD-209ENST00000562940 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
MTHFSD-209ENST00000562940 ATRNO75882 1429 aa18.61■□□□□ 0.57
MTHFSD-209ENST00000562940 RIPK4P57078 832 aa18.61■□□□□ 0.57
MTHFSD-209ENST00000562940 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
MTHFSD-209ENST00000562940 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
MTHFSD-209ENST00000562940 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
MTHFSD-209ENST00000562940 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
MTHFSD-209ENST00000562940 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
MTHFSD-209ENST00000562940 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
MTHFSD-209ENST00000562940 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
MTHFSD-209ENST00000562940 BARGINQ6ZT62 677 aa18.59■□□□□ 0.57
MTHFSD-209ENST00000562940 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
MTHFSD-209ENST00000562940 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
MTHFSD-209ENST00000562940 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
MTHFSD-209ENST00000562940 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
MTHFSD-209ENST00000562940 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
MTHFSD-209ENST00000562940 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
MTHFSD-209ENST00000562940 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
MTHFSD-209ENST00000562940 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
MTHFSD-209ENST00000562940 GLI3P10071 1580 aa18.56■□□□□ 0.56
MTHFSD-209ENST00000562940 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
MTHFSD-209ENST00000562940 SHANK3Q9BYB0 1731 aa18.56■□□□□ 0.56
MTHFSD-209ENST00000562940 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
MTHFSD-209ENST00000562940 DDB1Q16531 1140 aa18.55■□□□□ 0.56
MTHFSD-209ENST00000562940 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
MTHFSD-209ENST00000562940 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
MTHFSD-209ENST00000562940 EXOC5O00471 708 aa18.54■□□□□ 0.56
MTHFSD-209ENST00000562940 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
MTHFSD-209ENST00000562940 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
MTHFSD-209ENST00000562940 WWC1Q8IX03 1113 aa18.54■□□□□ 0.56
MTHFSD-209ENST00000562940 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
MTHFSD-209ENST00000562940 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
MTHFSD-209ENST00000562940 MYH16Q9H6N6 1097 aa18.53■□□□□ 0.56
MTHFSD-209ENST00000562940 QTRT2Q9H974 415 aaKnown RBP18.53■□□□□ 0.56
MTHFSD-209ENST00000562940 IL16Q14005 1332 aa18.52■□□□□ 0.56
MTHFSD-209ENST00000562940 TEFQ10587 303 aa18.52■□□□□ 0.56
MTHFSD-209ENST00000562940 E9PSI1 815 aa18.51■□□□□ 0.55
MTHFSD-209ENST00000562940 PHKG2P15735 406 aa18.51■□□□□ 0.55
MTHFSD-209ENST00000562940 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
MTHFSD-209ENST00000562940 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
MTHFSD-209ENST00000562940 DDX54Q8TDD1 881 aaKnown RBP18.5■□□□□ 0.55
MTHFSD-209ENST00000562940 GNAI1P63096 354 aa18.49■□□□□ 0.55
MTHFSD-209ENST00000562940 RBM6P78332 1123 aaKnown RBP18.49■□□□□ 0.55
MTHFSD-209ENST00000562940 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
MTHFSD-209ENST00000562940 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
MTHFSD-209ENST00000562940 MRC1P22897 1456 aa18.48■□□□□ 0.55
MTHFSD-209ENST00000562940 MCM10Q7L590 875 aa18.48■□□□□ 0.55
MTHFSD-209ENST00000562940 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
MTHFSD-209ENST00000562940 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
MTHFSD-209ENST00000562940 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
MTHFSD-209ENST00000562940 CYP27B1O15528 508 aa18.46■□□□□ 0.55
MTHFSD-209ENST00000562940 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
MTHFSD-209ENST00000562940 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
MTHFSD-209ENST00000562940 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
MTHFSD-209ENST00000562940 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
MTHFSD-209ENST00000562940 RXRBP28702 533 aa18.45■□□□□ 0.54
MTHFSD-209ENST00000562940 KDM6AO15550 1401 aaPredicted RBP18.45■□□□□ 0.54
MTHFSD-209ENST00000562940 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
MTHFSD-209ENST00000562940 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
MTHFSD-209ENST00000562940 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
MTHFSD-209ENST00000562940 CABP4P57796 275 aa18.43■□□□□ 0.54
MTHFSD-209ENST00000562940 SEPT12Q8IYM1 358 aa18.43■□□□□ 0.54
MTHFSD-209ENST00000562940 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
MTHFSD-209ENST00000562940 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
MTHFSD-209ENST00000562940 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
MTHFSD-209ENST00000562940 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
MTHFSD-209ENST00000562940 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
MTHFSD-209ENST00000562940 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
MTHFSD-209ENST00000562940 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
MTHFSD-209ENST00000562940 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
MTHFSD-209ENST00000562940 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
MTHFSD-209ENST00000562940 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
MTHFSD-209ENST00000562940 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
MTHFSD-209ENST00000562940 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
MTHFSD-209ENST00000562940 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
MTHFSD-209ENST00000562940 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
MTHFSD-209ENST00000562940 ITGB4P16144 1822 aa18.39■□□□□ 0.54
MTHFSD-209ENST00000562940 NHSQ6T4R5 1651 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms