RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 RNF144AP50876 292 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-202ENST00000562702 GAS6Q14393 721 aa8.1□□□□□ -1.11
HDGFL3-202ENST00000562702 RIPOR1Q6ZS17 1223 aa8.1□□□□□ -1.11
HDGFL3-202ENST00000562702 GALNT6Q8NCL4 622 aa8.1□□□□□ -1.11
HDGFL3-202ENST00000562702 LILRA1O75019 489 aa8.09□□□□□ -1.11
HDGFL3-202ENST00000562702 BCRP11274 1271 aa8.09□□□□□ -1.11
HDGFL3-202ENST00000562702 CCDC125Q86Z20 511 aa8.09□□□□□ -1.11
HDGFL3-202ENST00000562702 ZNF837Q96EG3 531 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-202ENST00000562702 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
HDGFL3-202ENST00000562702 IGF1RP08069 1367 aa8.09□□□□□ -1.12
HDGFL3-202ENST00000562702 RHOQP17081 205 aa8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 GPC1P35052 558 aa8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 ADD1P35611 737 aaKnown RBP8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-202ENST00000562702 ESPNB1AK53 854 aa8.07□□□□□ -1.12
HDGFL3-202ENST00000562702 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
HDGFL3-202ENST00000562702 SH3D19Q5HYK7 790 aa8.07□□□□□ -1.12
HDGFL3-202ENST00000562702 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
HDGFL3-202ENST00000562702 LRRC4BQ9NT99 713 aa8.07□□□□□ -1.12
HDGFL3-202ENST00000562702 CNTNAP5Q8WYK1 1306 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 MEN1O00255 615 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 ADAM23O75077 832 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 NLRP3Q96P20 1036 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 DYRK1BQ9Y463 629 aa8.06□□□□□ -1.12
HDGFL3-202ENST00000562702 GPR25O00155 361 aa8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 MX2P20592 715 aa8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 GAS2L1Q99501 681 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-202ENST00000562702 GTPBP3Q969Y2 492 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-202ENST00000562702 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-202ENST00000562702 DBN1Q16643 649 aa8.03□□□□□ -1.12
HDGFL3-202ENST00000562702 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.03□□□□□ -1.124e-6■■■■■ 36.3
HDGFL3-202ENST00000562702 USP17L8P0C7I0 530 aa8.02□□□□□ -1.13
HDGFL3-202ENST00000562702 RNF20Q5VTR2 975 aa8.02□□□□□ -1.13
HDGFL3-202ENST00000562702 PROCA1Q8NCQ7 364 aaPredicted RBP8.02□□□□□ -1.13
HDGFL3-202ENST00000562702 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
HDGFL3-202ENST00000562702 MAP2K3P46734 347 aa8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 WDR44Q5JSH3 913 aa8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 EPS8L1Q8TE68 723 aa8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 ACDQ96AP0 544 aa8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 PCDHB9Q9Y5E1 797 aa8.01□□□□□ -1.13
HDGFL3-202ENST00000562702 A0A1W2PRU2 124 aa8□□□□□ -1.13
HDGFL3-202ENST00000562702 POU4F2Q12837 409 aa8□□□□□ -1.13
HDGFL3-202ENST00000562702 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
HDGFL3-202ENST00000562702 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
HDGFL3-202ENST00000562702 K7ELQ4 463 aaPredicted RBP7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 OIP5O43482 229 aa7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 XP32Q5T750 250 aa7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 NUCKS1Q9H1E3 243 aaKnown RBP7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 MKL2Q9ULH7 1088 aa7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 PHF24Q9UPV7 400 aa7.99□□□□□ -1.13
HDGFL3-202ENST00000562702 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 OXCT2Q9BYC2 517 aaPredicted RBP7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 TIMMDC1Q9NPL8 285 aa7.98□□□□□ -1.13
HDGFL3-202ENST00000562702 PIK3R2O00459 728 aa7.97□□□□□ -1.13
HDGFL3-202ENST00000562702 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
HDGFL3-202ENST00000562702 F11P03951 625 aa7.97□□□□□ -1.13
HDGFL3-202ENST00000562702 PROCP04070 461 aa7.97□□□□□ -1.13
HDGFL3-202ENST00000562702 CLN3Q13286 438 aa7.97□□□□□ -1.13
HDGFL3-202ENST00000562702 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 CFHR5Q9BXR6 569 aa7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
HDGFL3-202ENST00000562702 WASLO00401 505 aaPredicted RBP7.95□□□□□ -1.14
HDGFL3-202ENST00000562702 FBXO31Q5XUX0 539 aaPredicted RBP7.95□□□□□ -1.14
HDGFL3-202ENST00000562702 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
HDGFL3-202ENST00000562702 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
HDGFL3-202ENST00000562702 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
HDGFL3-202ENST00000562702 TMEM259Q4ZIN3 620 aa7.94□□□□□ -1.14
HDGFL3-202ENST00000562702 RFC5P40937 340 aa7.93□□□□□ -1.14
HDGFL3-202ENST00000562702 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
HDGFL3-202ENST00000562702 ITGB2P05107 769 aa7.92□□□□□ -1.14
HDGFL3-202ENST00000562702 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
HDGFL3-202ENST00000562702 BAG6P46379 1132 aa7.92□□□□□ -1.14
HDGFL3-202ENST00000562702 PGBD3Q8N328 593 aa7.92□□□□□ -1.14
HDGFL3-202ENST00000562702 GOLGA6L1Q8N7Z2 621 aa7.92□□□□□ -1.14
HDGFL3-202ENST00000562702 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
HDGFL3-202ENST00000562702 AMPD1P23109 780 aa7.91□□□□□ -1.14
HDGFL3-202ENST00000562702 LBRQ14739 615 aaKnown RBP7.91□□□□□ -1.14
HDGFL3-202ENST00000562702 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
HDGFL3-202ENST00000562702 PCDHB11Q9Y5F2 797 aa7.91□□□□□ -1.14
HDGFL3-202ENST00000562702 A0A1B0GTH6 734 aa7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 GNRH1P01148 92 aa7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 FBXO45P0C2W1 286 aa7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 SNRPNP63162 240 aaKnown RBP7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 KLRG1Q96E93 195 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms