RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PDE4AP27815 886 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 BABAM1Q9NWV8 329 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 AATKQ6ZMQ8 1374 aa9.25□□□□□ -0.93
TCF4-216ENST00000562680 STARD3NLO95772 234 aa9.25□□□□□ -0.93
TCF4-216ENST00000562680 MADDQ8WXG6 1647 aa9.25□□□□□ -0.93
TCF4-216ENST00000562680 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
TCF4-216ENST00000562680 MFAP1P55081 439 aaKnown RBP9.25□□□□□ -0.93
TCF4-216ENST00000562680 ARHGAP45Q92619 1136 aa9.25□□□□□ -0.93
TCF4-216ENST00000562680 AIMP1Q12904 312 aaKnown RBP9.25□□□□□ -0.93
TCF4-216ENST00000562680 MCM10Q7L590 875 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 RBM42Q9BTD8 480 aaKnown RBP9.24□□□□□ -0.93
TCF4-216ENST00000562680 TMOD3Q9NYL9 352 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 ST18O60284 1047 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 CLASRPQ8N2M8 674 aaKnown RBP9.24□□□□□ -0.93
TCF4-216ENST00000562680 PLEKHH1Q9ULM0 1364 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 EXOC5O00471 708 aa9.24□□□□□ -0.93
TCF4-216ENST00000562680 SSH1Q8WYL5 1049 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 DBF4Q9UBU7 674 aaPredicted RBP9.23□□□□□ -0.93
TCF4-216ENST00000562680 VWDEQ8N2E2 1590 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 HOXC9P31274 260 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
TCF4-216ENST00000562680 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 INTS3Q68E01 1043 aaKnown RBP9.23□□□□□ -0.93
TCF4-216ENST00000562680 ROBO2Q9HCK4 1378 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 CDCA7Q9BWT1 371 aaPredicted RBP9.23□□□□□ -0.93
TCF4-216ENST00000562680 KIF3AQ9Y496 699 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 REREQ9P2R6 1566 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
TCF4-216ENST00000562680 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 RRP9O43818 475 aaKnown RBP9.22□□□□□ -0.93
TCF4-216ENST00000562680 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
TCF4-216ENST00000562680 DEPDC5O75140 1603 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 CLTCQ00610 1675 aaKnown RBP9.22□□□□□ -0.93
TCF4-216ENST00000562680 DLC1Q96QB1 1528 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 FRAT2O75474 233 aaPredicted RBP9.22□□□□□ -0.93
TCF4-216ENST00000562680 DNTTIP2Q5QJE6 756 aaKnown RBP9.22□□□□□ -0.93
TCF4-216ENST00000562680 USHBP1Q8N6Y0 703 aa9.22□□□□□ -0.93
TCF4-216ENST00000562680 G3V3G9 751 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 LNPKQ9C0E8 428 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 BLMP54132 1417 aaPredicted RBP9.21□□□□□ -0.93
TCF4-216ENST00000562680 IL13P35225 146 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 RILPL2Q969X0 211 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 NGLY1Q96IV0 654 aa9.21□□□□□ -0.93
TCF4-216ENST00000562680 IPO9Q96P70 1041 aaKnown RBP9.21□□□□□ -0.93
TCF4-216ENST00000562680 TMEM94Q12767 1356 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 MAP3K5Q99683 1374 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 HIP1O00291 1037 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 CDC45O75419 566 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 SURF6O75683 361 aaKnown RBP9.21□□□□□ -0.94
TCF4-216ENST00000562680 RTL1A6NKG5 1358 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 KIAA1210Q9ULL0 1709 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 ZRSR1Q15695 479 aaKnown RBP9.21□□□□□ -0.94
TCF4-216ENST00000562680 ZCRB1Q8TBF4 217 aaKnown RBP9.21□□□□□ -0.94
TCF4-216ENST00000562680 GBP4Q96PP9 640 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 ZRANB1Q9UGI0 708 aa9.21□□□□□ -0.94
TCF4-216ENST00000562680 EYA1Q99502 592 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 MBIPQ9NS73 344 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 USP6P35125 1406 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 MPRIPQ6WCQ1 1025 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 NAP1L2Q9ULW6 460 aaPredicted RBP9.2□□□□□ -0.94
TCF4-216ENST00000562680 ZKSCAN1P17029 563 aaPredicted RBP9.2□□□□□ -0.94
TCF4-216ENST00000562680 ORAI2Q96SN7 254 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
TCF4-216ENST00000562680 SPATA31D1Q6ZQQ2 1576 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 ADAMTS2O95450 1211 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 TMEM57Q8N5G2 664 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 BBXQ8WY36 941 aaPredicted RBP9.19□□□□□ -0.94
TCF4-216ENST00000562680 PDZRN3Q9UPQ7 1066 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 SNRPA1P09661 255 aaKnown RBP9.19□□□□□ -0.94
TCF4-216ENST00000562680 IL2RBP14784 551 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 CHRNA2Q15822 529 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 HOXB7P09629 217 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 PTCH1Q13635 1447 aa9.19□□□□□ -0.94
TCF4-216ENST00000562680 CNTROBQ8N137 903 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 NEXMIFQ5QGS0 1516 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 MSH5O43196 834 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 DNAAF4Q8WXU2 420 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 ADGRL3Q9HAR2 1447 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
TCF4-216ENST00000562680 L1TD1Q5T7N2 865 aaKnown RBP9.18□□□□□ -0.94
TCF4-216ENST00000562680 NOL10Q9BSC4 688 aaKnown RBP9.18□□□□□ -0.94
TCF4-216ENST00000562680 LRRCC1Q9C099 1032 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 FLIIQ13045 1269 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 AEBP1Q8IUX7 1158 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 SMARCC1Q92922 1105 aaPredicted RBP9.18□□□□□ -0.94
TCF4-216ENST00000562680 RAB11FIP3O75154 756 aa9.18□□□□□ -0.94
TCF4-216ENST00000562680 GOLGA6L4A6NEF3 574 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms