RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	ARMC2	Q8NEN0	867 aa		7.41	□□□□□ -1.22
LRRC28-222	ENST00000561431	SOCS7	O14512	581 aa		7.4	□□□□□ -1.22
LRRC28-222	ENST00000561431	ADAM23	O75077	832 aa		7.4	□□□□□ -1.22
LRRC28-222	ENST00000561431	NR6A1	Q15406	480 aa		7.4	□□□□□ -1.22
LRRC28-222	ENST00000561431	NBPF14	Q5TI25	921 aa		7.4	□□□□□ -1.22
LRRC28-222	ENST00000561431	CTSO	P43234	321 aa	Predicted RBP	7.39	□□□□□ -1.23
LRRC28-222	ENST00000561431	PGPEP1	Q9NXJ5	209 aa		7.39	□□□□□ -1.23
LRRC28-222	ENST00000561431	SENP3-EIF4A1	A0A087X0R7	540 aa		7.38	□□□□□ -1.23
LRRC28-222	ENST00000561431	PLA2G4E	Q3MJ16	856 aa		7.38	□□□□□ -1.23
LRRC28-222	ENST00000561431	ERFE	Q4G0M1	354 aa		7.38	□□□□□ -1.23
LRRC28-222	ENST00000561431	GJD4	Q96KN9	370 aa	Predicted RBP	7.38	□□□□□ -1.23
LRRC28-222	ENST00000561431	CARD14	Q9BXL6	1004 aa		7.38	□□□□□ -1.23
LRRC28-222	ENST00000561431	MSTN	O14793	375 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	ITGB2	P05107	769 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	CELA2B	P08218	269 aa	Predicted RBP	7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	SRSF11	Q05519	484 aa	Known RBP	7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	EPS8L1	Q8TE68	723 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	CCDC97	Q96F63	343 aa	Predicted RBP	7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	AGBL1	Q96MI9	1066 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	INSM2	Q96T92	566 aa	Predicted RBP	7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	SPOCK3	Q9BQ16	436 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	TRIM34	Q9BYJ4	488 aa		7.37	□□□□□ -1.23
LRRC28-222	ENST00000561431	MAP3K10	Q02779	954 aa		7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	GAS6	Q14393	721 aa		7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	WASHC4	Q2M389	1173 aa		7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	DCAF5	Q96JK2	942 aa		7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	CALR3	Q96L12	384 aa	Known RBP	7.36	□□□□□ -1.23
LRRC28-222	ENST00000561431	RELB	Q01201	579 aa		7.35	□□□□□ -1.23
LRRC28-222	ENST00000561431	RNF217	Q8TC41	542 aa		7.35	□□□□□ -1.23
LRRC28-222	ENST00000561431	KRTAP4-8	Q9BYQ9	185 aa		7.34	□□□□□ -1.23
LRRC28-222	ENST00000561431	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.34	□□□□□ -1.23
LRRC28-222	ENST00000561431	CNTNAP5	Q8WYK1	1306 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	PROC	P04070	461 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	VAC14	Q08AM6	782 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	CCDC82	Q8N4S0	544 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	KCTD15	Q96SI1	283 aa	Predicted RBP	7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	C1orf115	Q9H7X2	142 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	POLM	Q9NP87	494 aa	Predicted RBP	7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	FKBPL	Q9UIM3	349 aa		7.33	□□□□□ -1.24
LRRC28-222	ENST00000561431	ARX	Q96QS3	562 aa		7.32	□□□□□ -1.24
LRRC28-222	ENST00000561431	ENAM	Q9NRM1	1142 aa		7.32	□□□□□ -1.24
LRRC28-222	ENST00000561431	SERPINA10	Q9UK55	444 aa		7.32	□□□□□ -1.24
LRRC28-222	ENST00000561431	POM121C	A8CG34	1229 aa		7.31	□□□□□ -1.24
LRRC28-222	ENST00000561431	DHX9	Q08211	1270 aa	Known RBP	7.31	□□□□□ -1.24
LRRC28-222	ENST00000561431	IRF5	Q13568	498 aa		7.31	□□□□□ -1.24
LRRC28-222	ENST00000561431	HOMEZ	Q8IX15	550 aa		7.31	□□□□□ -1.24
LRRC28-222	ENST00000561431	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.31	□□□□□ -1.24
LRRC28-222	ENST00000561431	PHF20L1	A8MW92	1017 aa		7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	SEMA3F	Q13275	785 aa		7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	INTS6L	Q5JSJ4	861 aa	Known RBP	7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	HDGFL1	Q5TGJ6	251 aa		7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	GLMN	Q92990	594 aa		7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	SLC10A4	Q96EP9	437 aa		7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	CDV3	Q9UKY7	258 aa	Known RBP	7.3	□□□□□ -1.24
LRRC28-222	ENST00000561431	ARHGAP9	Q9BRR9	750 aa		7.29	□□□□□ -1.24
LRRC28-222	ENST00000561431	ZBBX	A8MT70	800 aa		7.28	□□□□□ -1.24
LRRC28-222	ENST00000561431	PTK2	Q05397	1052 aa		7.28	□□□□□ -1.24
LRRC28-222	ENST00000561431	PDXDC2P	Q6P474	469 aa		7.28	□□□□□ -1.24
LRRC28-222	ENST00000561431	BEND7	Q8N7W2	519 aa	Predicted RBP	7.28	□□□□□ -1.24
LRRC28-222	ENST00000561431	MBIP	Q9NS73	344 aa		7.28	□□□□□ -1.24
LRRC28-222	ENST00000561431	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.27	□□□□□ -1.24
LRRC28-222	ENST00000561431	SOX11	P35716	441 aa		7.27	□□□□□ -1.25
LRRC28-222	ENST00000561431	NR1H3	Q13133	447 aa		7.27	□□□□□ -1.25
LRRC28-222	ENST00000561431	GALNT6	Q8NCL4	622 aa		7.27	□□□□□ -1.25
LRRC28-222	ENST00000561431	IGF1R	P08069	1367 aa		7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	FBXO45	P0C2W1	286 aa		7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	PODN	Q7Z5L7	613 aa		7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	ZBTB33	Q86T24	672 aa		7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	KDF1	Q8NAX2	398 aa	Predicted RBP	7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	ZNF837	Q96EG3	531 aa	Predicted RBP	7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431	TMPRSS4	Q9NRS4	437 aa		7.26	□□□□□ -1.25
LRRC28-222	ENST00000561431		K7ELQ4	463 aa	Predicted RBP	7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	ADH1A	P07327	375 aa		7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	BCR	P11274	1271 aa		7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	LYSMD3	Q7Z3D4	306 aa		7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	NEDD1	Q8NHV4	660 aa		7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	OCSTAMP	Q9BR26	566 aa		7.25	□□□□□ -1.25
LRRC28-222	ENST00000561431	GPR25	O00155	361 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	GPR37L1	O60883	481 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	ADD1	P35611	737 aa	Known RBP	7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	PTGIR	P43119	386 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	ZNF592	Q92610	1267 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	ACD	Q96AP0	544 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	PCDHB9	Q9Y5E1	797 aa		7.24	□□□□□ -1.25
LRRC28-222	ENST00000561431	LILRA1	O75019	489 aa		7.23	□□□□□ -1.25
LRRC28-222	ENST00000561431	TRIM22	Q8IYM9	498 aa		7.23	□□□□□ -1.25
LRRC28-222	ENST00000561431		Q8N3U1	123 aa		7.23	□□□□□ -1.25
LRRC28-222	ENST00000561431	GMCL1	Q96IK5	515 aa		7.23	□□□□□ -1.25
LRRC28-222	ENST00000561431	GPSM3	Q9Y4H4	160 aa		7.23	□□□□□ -1.25
LRRC28-222	ENST00000561431	RB1CC1	Q8TDY2	1594 aa		7.22	□□□□□ -1.25
LRRC28-222	ENST00000561431	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.22	□□□□□ -1.25
LRRC28-222	ENST00000561431	RFX1	P22670	979 aa		7.22	□□□□□ -1.25
LRRC28-222	ENST00000561431	PRICKLE2	Q7Z3G6	844 aa		7.22	□□□□□ -1.25
LRRC28-222	ENST00000561431	ALG2	Q9H553	416 aa		7.22	□□□□□ -1.25
LRRC28-222	ENST00000561431	RHOQ	P17081	205 aa		7.21	□□□□□ -1.26

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