RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
HERC1-214ENST00000561400 CCDC9Q9Y3X0 531 aaKnown RBP15.44■□□□□ 0.06
HERC1-214ENST00000561400 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
HERC1-214ENST00000561400 QTRT2Q9H974 415 aaKnown RBP15.43■□□□□ 0.06
HERC1-214ENST00000561400 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
HERC1-214ENST00000561400 DEKP35659 375 aaKnown RBP15.43■□□□□ 0.06
HERC1-214ENST00000561400 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
HERC1-214ENST00000561400 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
HERC1-214ENST00000561400 GLI3P10071 1580 aa15.42■□□□□ 0.06
HERC1-214ENST00000561400 FCHSD2O94868 740 aa15.42■□□□□ 0.06
HERC1-214ENST00000561400 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
HERC1-214ENST00000561400 PRKAR2BP31323 418 aa15.41■□□□□ 0.06
HERC1-214ENST00000561400 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
HERC1-214ENST00000561400 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
HERC1-214ENST00000561400 MEGF6O75095 1541 aa15.41■□□□□ 0.06
HERC1-214ENST00000561400 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
HERC1-214ENST00000561400 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
HERC1-214ENST00000561400 DISP2A7MBM2 1401 aa15.39■□□□□ 0.05
HERC1-214ENST00000561400 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
HERC1-214ENST00000561400 PARP4Q9UKK3 1724 aaKnown RBP15.39■□□□□ 0.05
HERC1-214ENST00000561400 RAPGEF4Q8WZA2 1011 aa15.39■□□□□ 0.05
HERC1-214ENST00000561400 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
HERC1-214ENST00000561400 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
HERC1-214ENST00000561400 IL2RBP14784 551 aa15.38■□□□□ 0.05
HERC1-214ENST00000561400 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
HERC1-214ENST00000561400 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
HERC1-214ENST00000561400 BCL11BQ9C0K0 894 aaPredicted RBP15.37■□□□□ 0.05
HERC1-214ENST00000561400 TATP17735 454 aaPredicted RBP15.37■□□□□ 0.05
HERC1-214ENST00000561400 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
HERC1-214ENST00000561400 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
HERC1-214ENST00000561400 OVOS2A0A0G2JMS6 1433 aa15.36■□□□□ 0.05
HERC1-214ENST00000561400 SHANK3Q9BYB0 1731 aa15.36■□□□□ 0.05
HERC1-214ENST00000561400 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
HERC1-214ENST00000561400 THSD7AQ9UPZ6 1657 aa15.35■□□□□ 0.05
HERC1-214ENST00000561400 DLG5Q8TDM6 1919 aa15.35■□□□□ 0.05
HERC1-214ENST00000561400 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
HERC1-214ENST00000561400 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
HERC1-214ENST00000561400 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
HERC1-214ENST00000561400 LRRC37A3O60309 1634 aa15.34■□□□□ 0.05
HERC1-214ENST00000561400 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
HERC1-214ENST00000561400 RBM6P78332 1123 aaKnown RBP15.34■□□□□ 0.05
HERC1-214ENST00000561400 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
HERC1-214ENST00000561400 TAF7LQ5H9L4 462 aa15.33■□□□□ 0.05
HERC1-214ENST00000561400 CDCA7Q9BWT1 371 aaPredicted RBP15.33■□□□□ 0.05
HERC1-214ENST00000561400 MAPK8IP3Q9UPT6 1336 aa15.33■□□□□ 0.04
HERC1-214ENST00000561400 APAF1O14727 1248 aa15.33■□□□□ 0.04
HERC1-214ENST00000561400 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
HERC1-214ENST00000561400 ZCRB1Q8TBF4 217 aaKnown RBP15.32■□□□□ 0.04
HERC1-214ENST00000561400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■□□ 16.3
HERC1-214ENST00000561400 PLEKHG2Q9H7P9 1386 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 NEFMP07197 916 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 RXRBP28702 533 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 AAMPQ13685 434 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 BRWD3Q6RI45 1802 aa15.32■□□□□ 0.04
HERC1-214ENST00000561400 A0A0G2JS52 829 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 RRP7AQ9Y3A4 280 aaKnown RBP15.31■□□□□ 0.04
HERC1-214ENST00000561400 EXOC5O00471 708 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 CYP27B1O15528 508 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
HERC1-214ENST00000561400 DDB1Q16531 1140 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 SEPT12Q8IYM1 358 aa15.31■□□□□ 0.04
HERC1-214ENST00000561400 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
HERC1-214ENST00000561400 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
HERC1-214ENST00000561400 NFE2L2Q16236 605 aa15.3■□□□□ 0.04
HERC1-214ENST00000561400 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
HERC1-214ENST00000561400 NEUROD2Q15784 382 aa15.29■□□□□ 0.04
HERC1-214ENST00000561400 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
HERC1-214ENST00000561400 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
HERC1-214ENST00000561400 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
HERC1-214ENST00000561400 GLIPR1L2Q4G1C9 344 aa15.28■□□□□ 0.04
HERC1-214ENST00000561400 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
HERC1-214ENST00000561400 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
HERC1-214ENST00000561400 PHKG2P15735 406 aa15.28■□□□□ 0.04
HERC1-214ENST00000561400 RIPK4P57078 832 aa15.28■□□□□ 0.04
HERC1-214ENST00000561400 RGS12O14924 1447 aa15.27■□□□□ 0.03
HERC1-214ENST00000561400 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.03
HERC1-214ENST00000561400 IFNL2Q8IZJ0 200 aa15.27■□□□□ 0.03
HERC1-214ENST00000561400 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.03
HERC1-214ENST00000561400 KAT6BQ8WYB5 2073 aa15.26■□□□□ 0.03
HERC1-214ENST00000561400 C1orf141Q5JVX7 400 aa15.26■□□□□ 0.03
HERC1-214ENST00000561400 HOMEZQ8IX15 550 aa15.26■□□□□ 0.03
HERC1-214ENST00000561400 MAP3K5Q99683 1374 aa15.26■□□□□ 0.03
HERC1-214ENST00000561400 SCN11AQ9UI33 1791 aa15.25■□□□□ 0.03
HERC1-214ENST00000561400 A0A0U1RQG5 324 aaPredicted RBP15.25■□□□□ 0.03
HERC1-214ENST00000561400 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
HERC1-214ENST00000561400 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
HERC1-214ENST00000561400 EP400Q96L91 3159 aa15.25■□□□□ 0.03
HERC1-214ENST00000561400 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
HERC1-214ENST00000561400 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
HERC1-214ENST00000561400 ADAMTS7Q9UKP4 1686 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 MPRIPQ6WCQ1 1025 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
HERC1-214ENST00000561400 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
HERC1-214ENST00000561400 KDM6AO15550 1401 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms