RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
USP8-218ENST00000561330 EML3Q32P44 896 aa9.51□□□□□ -0.89
USP8-218ENST00000561330 DEPDC4Q8N2C3 294 aa9.51□□□□□ -0.89
USP8-218ENST00000561330 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
USP8-218ENST00000561330 BMP2P12643 396 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 RELBQ01201 579 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 NCOA4Q13772 614 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 CYP2U1Q7Z449 544 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
USP8-218ENST00000561330 OSBPL3Q9H4L5 887 aa9.5□□□□□ -0.89
USP8-218ENST00000561330 USP17L3A6NCW0 530 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 USP17L4A6NCW7 530 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 USP17L1Q7RTZ2 530 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 NOD1Q9Y239 953 aa9.49□□□□□ -0.89
USP8-218ENST00000561330 SUPT5HO00267 1087 aaKnown RBP9.48□□□□□ -0.89
USP8-218ENST00000561330 PTGIRP43119 386 aa9.48□□□□□ -0.89
USP8-218ENST00000561330 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
USP8-218ENST00000561330 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
USP8-218ENST00000561330 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
USP8-218ENST00000561330 KDF1Q8NAX2 398 aaPredicted RBP9.47□□□□□ -0.89
USP8-218ENST00000561330 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
USP8-218ENST00000561330 TRIM50Q86XT4 487 aa9.46□□□□□ -0.9
USP8-218ENST00000561330 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
USP8-218ENST00000561330 C1orf115Q9H7X2 142 aa9.46□□□□□ -0.9
USP8-218ENST00000561330 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.9
USP8-218ENST00000561330 SPINT1O43278 529 aa9.45□□□□□ -0.9
USP8-218ENST00000561330 GNRH1P01148 92 aa9.45□□□□□ -0.9
USP8-218ENST00000561330 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
USP8-218ENST00000561330 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
USP8-218ENST00000561330 GTF2IP78347 998 aa9.44□□□□□ -0.9
USP8-218ENST00000561330 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
USP8-218ENST00000561330 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
USP8-218ENST00000561330 KIFC2Q96AC6 838 aa9.44□□□□□ -0.9
USP8-218ENST00000561330 A0A1W2PRU2 124 aa9.43□□□□□ -0.9
USP8-218ENST00000561330 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
USP8-218ENST00000561330 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
USP8-218ENST00000561330 PCDHGA11Q9Y5H2 935 aa9.43□□□□□ -0.9
USP8-218ENST00000561330 MEN1O00255 615 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 RFX1P22670 979 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 PSME1Q06323 249 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 ESCO1Q5FWF5 840 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
USP8-218ENST00000561330 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
USP8-218ENST00000561330 C11orf95C9JLR9 678 aaPredicted RBP9.41□□□□□ -0.9
USP8-218ENST00000561330 CLN3Q13286 438 aa9.41□□□□□ -0.9
USP8-218ENST00000561330 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
USP8-218ENST00000561330 RAB6BQ9NRW1 208 aa9.41□□□□□ -0.9
USP8-218ENST00000561330 TTLL8A6PVC2 850 aa9.4□□□□□ -0.9
USP8-218ENST00000561330 POTECB2RU33 542 aa9.4□□□□□ -0.9
USP8-218ENST00000561330 KANK4Q5T7N3 995 aaPredicted RBP9.4□□□□□ -0.9
USP8-218ENST00000561330 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
USP8-218ENST00000561330 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
USP8-218ENST00000561330 RASA1P20936 1047 aa9.39□□□□□ -0.91
USP8-218ENST00000561330 CTSOP43234 321 aaPredicted RBP9.39□□□□□ -0.91
USP8-218ENST00000561330 GDF10P55107 478 aa9.39□□□□□ -0.91
USP8-218ENST00000561330 ZNF787Q6DD87 383 aa9.39□□□□□ -0.91
USP8-218ENST00000561330 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
USP8-218ENST00000561330 OGFOD1Q8N543 542 aa9.39□□□□□ -0.91
USP8-218ENST00000561330 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
USP8-218ENST00000561330 MAN1A2O60476 641 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 IL2RAP01589 272 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 CLDN10P78369 228 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 LARGE2Q8N3Y3 721 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 XAGE2Q96GT9 111 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 ESYT1Q9BSJ8 1104 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
USP8-218ENST00000561330 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
USP8-218ENST00000561330 INHAP05111 366 aa9.37□□□□□ -0.91
USP8-218ENST00000561330 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
USP8-218ENST00000561330 GPC1P35052 558 aa9.37□□□□□ -0.91
USP8-218ENST00000561330 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
USP8-218ENST00000561330 SCNN1DP51172 638 aa9.37□□□□□ -0.91
USP8-218ENST00000561330 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
USP8-218ENST00000561330 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
USP8-218ENST00000561330 RBM19Q9Y4C8 960 aaKnown RBP9.37□□□□□ -0.91
USP8-218ENST00000561330 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
USP8-218ENST00000561330 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
USP8-218ENST00000561330 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
USP8-218ENST00000561330 ZNF594Q96JF6 807 aaPredicted RBP9.36□□□□□ -0.91
USP8-218ENST00000561330 KIAA1024Q9UPX6 916 aa9.36□□□□□ -0.91
USP8-218ENST00000561330 TMEM229AB2RXF0 380 aa9.35□□□□□ -0.91
USP8-218ENST00000561330 WASLO00401 505 aaPredicted RBP9.35□□□□□ -0.91
USP8-218ENST00000561330 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
USP8-218ENST00000561330 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
USP8-218ENST00000561330 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
USP8-218ENST00000561330 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
USP8-218ENST00000561330 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
USP8-218ENST00000561330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.34□□□□□ -0.91
USP8-218ENST00000561330 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 CENPCQ03188 943 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.915e-6■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms