RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 ERBB3P21860 1342 aa9.54□□□□□ -0.88
HMBOX1-214ENST00000560357 LMO7Q8WWI1 1683 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 CAMTA1Q9Y6Y1 1673 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 NEFMP07197 916 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
HMBOX1-214ENST00000560357 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
HMBOX1-214ENST00000560357 RIPK4P57078 832 aa9.52□□□□□ -0.89
HMBOX1-214ENST00000560357 USHBP1Q8N6Y0 703 aa9.52□□□□□ -0.89
HMBOX1-214ENST00000560357 CDCA7LQ96GN5 454 aa9.52□□□□□ -0.89
HMBOX1-214ENST00000560357 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
HMBOX1-214ENST00000560357 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
HMBOX1-214ENST00000560357 EVX2Q03828 476 aa9.51□□□□□ -0.89
HMBOX1-214ENST00000560357 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
HMBOX1-214ENST00000560357 WDR63Q8IWG1 891 aa9.51□□□□□ -0.89
HMBOX1-214ENST00000560357 JCADQ9P266 1359 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 COL14A1Q05707 1796 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 SLFN5Q08AF3 891 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 TRMT2AQ8IZ69 625 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 NLRP2Q9NX02 1062 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 COL5A2P05997 1499 aaPredicted RBP9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 FAM208AQ9UK61 1670 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 WDR17Q8IZU2 1322 aa9.5□□□□□ -0.89
HMBOX1-214ENST00000560357 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
HMBOX1-214ENST00000560357 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
HMBOX1-214ENST00000560357 HSPA1LP34931 641 aa9.49□□□□□ -0.89
HMBOX1-214ENST00000560357 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
HMBOX1-214ENST00000560357 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
HMBOX1-214ENST00000560357 E9PSI1 815 aa9.48□□□□□ -0.89
HMBOX1-214ENST00000560357 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
HMBOX1-214ENST00000560357 EVA1CP58658 441 aa9.48□□□□□ -0.89
HMBOX1-214ENST00000560357 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
HMBOX1-214ENST00000560357 BTG4Q9NY30 223 aa9.48□□□□□ -0.89
HMBOX1-214ENST00000560357 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 DUSP27Q5VZP5 1158 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 LARP1Q6PKG0 1096 aaKnown RBP9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 TOM1L2Q6ZVM7 507 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 CARD10Q9BWT7 1032 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 IL16Q14005 1332 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 SPATA31A6Q5VVP1 1343 aa9.47□□□□□ -0.89
HMBOX1-214ENST00000560357 HTATSF1O43719 755 aaKnown RBP9.46□□□□□ -0.9
HMBOX1-214ENST00000560357 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
HMBOX1-214ENST00000560357 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
HMBOX1-214ENST00000560357 RAPGEF4Q8WZA2 1011 aa9.46□□□□□ -0.9
HMBOX1-214ENST00000560357 THUMPD2Q9BTF0 503 aaKnown RBP9.46□□□□□ -0.9
HMBOX1-214ENST00000560357 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 TATP17735 454 aaPredicted RBP9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.99e-7■■□□□ 13.2
HMBOX1-214ENST00000560357 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 CRB1P82279 1406 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 MEGF6O75095 1541 aa9.45□□□□□ -0.9
HMBOX1-214ENST00000560357 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 MCM10Q7L590 875 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 MAP3K5Q99683 1374 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 SLIT2O94813 1529 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 NWD2Q9ULI1 1742 aa9.44□□□□□ -0.9
HMBOX1-214ENST00000560357 LRP6O75581 1613 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 OVOS2A0A0G2JMS6 1433 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 AKAP4Q5JQC9 854 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 IL17REQ8NFR9 667 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 IFT57Q9NWB7 429 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
HMBOX1-214ENST00000560357 PKD1L3Q7Z443 1732 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 FANCIQ9NVI1 1328 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 IL2RBP14784 551 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 GNAI1P63096 354 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 TSR2Q969E8 191 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 RCAN3Q9UKA8 241 aa9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-214ENST00000560357 CEMIPQ8WUJ3 1361 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 CHL1O00533 1208 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 CYP27B1O15528 508 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 C1orf141Q5JVX7 400 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 USP35Q9P2H5 1018 aa9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 SUPT16HQ9Y5B9 1047 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-214ENST00000560357 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 DISP2A7MBM2 1401 aa9.4□□□□□ -0.9
HMBOX1-214ENST00000560357 SPATA31A1Q5TZJ5 1347 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms