RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 RHOQP17081 205 aa8.37□□□□□ -1.07
LRRC28-218ENST00000560236 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-218ENST00000560236 NR1H3Q13133 447 aa8.37□□□□□ -1.07
LRRC28-218ENST00000560236 A0A1W2PRU2 124 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-218ENST00000560236 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 ZNF592Q92610 1267 aa8.36□□□□□ -1.07
LRRC28-218ENST00000560236 CUEDC1Q9NWM3 386 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-218ENST00000560236 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-218ENST00000560236 GPC1P35052 558 aa8.35□□□□□ -1.07
LRRC28-218ENST00000560236 GSK3AP49840 483 aa8.35□□□□□ -1.07
LRRC28-218ENST00000560236 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-218ENST00000560236 TMEM151AQ8N4L1 468 aa8.34□□□□□ -1.07
LRRC28-218ENST00000560236 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
LRRC28-218ENST00000560236 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
LRRC28-218ENST00000560236 PCDHB11Q9Y5F2 797 aa8.34□□□□□ -1.07
LRRC28-218ENST00000560236 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
LRRC28-218ENST00000560236 SOCS7O14512 581 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 SCTRP47872 440 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 RASSF7Q02833 373 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 SLC27A3Q5K4L6 730 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 CYP2U1Q7Z449 544 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
LRRC28-218ENST00000560236 APBB1O00213 710 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 ARHGEF15O94989 841 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 GDF11O95390 407 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
LRRC28-218ENST00000560236 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 TRIM22Q8IYM9 498 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 GMCL1Q96IK5 515 aa8.32□□□□□ -1.08
LRRC28-218ENST00000560236 CLN3Q13286 438 aa8.31□□□□□ -1.08
LRRC28-218ENST00000560236 GAS6Q14393 721 aa8.31□□□□□ -1.08
LRRC28-218ENST00000560236 FOXR1Q6PIV2 292 aa8.31□□□□□ -1.08
LRRC28-218ENST00000560236 ZNF837Q96EG3 531 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-218ENST00000560236 DYRK1BQ9Y463 629 aa8.31□□□□□ -1.08
LRRC28-218ENST00000560236 GPR37L1O60883 481 aa8.3□□□□□ -1.08
LRRC28-218ENST00000560236 MARSP56192 900 aaKnown RBP8.3□□□□□ -1.08
LRRC28-218ENST00000560236 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
LRRC28-218ENST00000560236 POU4F2Q12837 409 aa8.3□□□□□ -1.08
LRRC28-218ENST00000560236 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
LRRC28-218ENST00000560236 DBN1Q16643 649 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
LRRC28-218ENST00000560236 LYPD4Q6UWN0 246 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-218ENST00000560236 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 OSBPL3Q9H4L5 887 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
LRRC28-218ENST00000560236 H7C1W4 665 aa8.28□□□□□ -1.08
LRRC28-218ENST00000560236 GPR25O00155 361 aa8.28□□□□□ -1.08
LRRC28-218ENST00000560236 TRAK2O60296 914 aa8.28□□□□□ -1.08
LRRC28-218ENST00000560236 IRS1P35568 1242 aa8.28□□□□□ -1.08
LRRC28-218ENST00000560236 MBIPQ9NS73 344 aa8.28□□□□□ -1.08
LRRC28-218ENST00000560236 GTPBP3Q969Y2 492 aaKnown RBP8.27□□□□□ -1.09
LRRC28-218ENST00000560236 CELA2BP08218 269 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-218ENST00000560236 WDR44Q5JSH3 913 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-218ENST00000560236 TRERF1Q96PN7 1200 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 TIMMDC1Q9NPL8 285 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 RAB6BQ9NRW1 208 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
LRRC28-218ENST00000560236 SPATA31C2B4DYI2 1134 aa8.25□□□□□ -1.09
LRRC28-218ENST00000560236 MYCP01106 439 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-218ENST00000560236 GNRH1P01148 92 aa8.25□□□□□ -1.09
LRRC28-218ENST00000560236 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
LRRC28-218ENST00000560236 IGF1RP08069 1367 aa8.24□□□□□ -1.09
LRRC28-218ENST00000560236 WASLO00401 505 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-218ENST00000560236 CNKSR1Q969H4 720 aa8.24□□□□□ -1.09
LRRC28-218ENST00000560236 ESYT1Q9BSJ8 1104 aa8.24□□□□□ -1.09
LRRC28-218ENST00000560236 F11P03951 625 aa8.23□□□□□ -1.09
LRRC28-218ENST00000560236 KANK3Q6NY19 840 aa8.23□□□□□ -1.09
LRRC28-218ENST00000560236 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-218ENST00000560236 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-218ENST00000560236 PRM3Q9NNZ6 103 aa8.23□□□□□ -1.09
LRRC28-218ENST00000560236 IL2RAP01589 272 aa8.22□□□□□ -1.09
LRRC28-218ENST00000560236 CENPCQ03188 943 aa8.22□□□□□ -1.09
LRRC28-218ENST00000560236 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
LRRC28-218ENST00000560236 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
LRRC28-218ENST00000560236 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-218ENST00000560236 EIF4G2P78344 907 aaKnown RBP eCLIP8.21□□□□□ -1.1
LRRC28-218ENST00000560236 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
LRRC28-218ENST00000560236 BCRP11274 1271 aa8.2□□□□□ -1.1
LRRC28-218ENST00000560236 MX2P20592 715 aa8.2□□□□□ -1.1
LRRC28-218ENST00000560236 GTF2E1P29083 439 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-218ENST00000560236 PHKA2P46019 1235 aa8.2□□□□□ -1.1
LRRC28-218ENST00000560236 SUZ12Q15022 739 aaKnown RBP8.2□□□□□ -1.1
LRRC28-218ENST00000560236 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
LRRC28-218ENST00000560236 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-218ENST00000560236 TPRNQ4KMQ1 711 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 ESCO1Q5FWF5 840 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 GNASQ5JWF2 1037 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 ACDQ96AP0 544 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 GPAMQ9HCL2 828 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms