RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HMOX1P09601 288 aa12.52□□□□□ -0.41
HERC1-206ENST00000559996 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
HERC1-206ENST00000559996 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
HERC1-206ENST00000559996 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
HERC1-206ENST00000559996 SULT6B1Q6IMI4 303 aa12.51□□□□□ -0.41
HERC1-206ENST00000559996 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
HERC1-206ENST00000559996 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
HERC1-206ENST00000559996 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC1-206ENST00000559996 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
HERC1-206ENST00000559996 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
HERC1-206ENST00000559996 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
HERC1-206ENST00000559996 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
HERC1-206ENST00000559996 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
HERC1-206ENST00000559996 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
HERC1-206ENST00000559996 CCDC146Q8IYE0 955 aa12.49□□□□□ -0.41
HERC1-206ENST00000559996 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
HERC1-206ENST00000559996 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
HERC1-206ENST00000559996 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
HERC1-206ENST00000559996 EVA1CP58658 441 aa12.48□□□□□ -0.41
HERC1-206ENST00000559996 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
HERC1-206ENST00000559996 CRB1P82279 1406 aa12.47□□□□□ -0.41
HERC1-206ENST00000559996 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
HERC1-206ENST00000559996 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
HERC1-206ENST00000559996 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
HERC1-206ENST00000559996 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
HERC1-206ENST00000559996 AFF2P51816 1311 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 APAF1O14727 1248 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 VPS72Q15906 364 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 TCP11L2Q8N4U5 519 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
HERC1-206ENST00000559996 USP21Q9UK80 565 aa12.46□□□□□ -0.41
HERC1-206ENST00000559996 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
HERC1-206ENST00000559996 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
HERC1-206ENST00000559996 MEGF6O75095 1541 aa12.45□□□□□ -0.42
HERC1-206ENST00000559996 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
HERC1-206ENST00000559996 ATRNO75882 1429 aa12.45□□□□□ -0.42
HERC1-206ENST00000559996 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
HERC1-206ENST00000559996 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
HERC1-206ENST00000559996 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
HERC1-206ENST00000559996 MEX3CQ5U5Q3 659 aaKnown RBP12.43□□□□□ -0.42
HERC1-206ENST00000559996 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
HERC1-206ENST00000559996 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
HERC1-206ENST00000559996 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
HERC1-206ENST00000559996 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
HERC1-206ENST00000559996 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
HERC1-206ENST00000559996 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
HERC1-206ENST00000559996 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
HERC1-206ENST00000559996 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
HERC1-206ENST00000559996 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
HERC1-206ENST00000559996 GLI3P10071 1580 aa12.41□□□□□ -0.42
HERC1-206ENST00000559996 IL2RBP14784 551 aa12.41□□□□□ -0.42
HERC1-206ENST00000559996 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
HERC1-206ENST00000559996 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
HERC1-206ENST00000559996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
HERC1-206ENST00000559996 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
HERC1-206ENST00000559996 CYP27B1O15528 508 aa12.4□□□□□ -0.42
HERC1-206ENST00000559996 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
HERC1-206ENST00000559996 CCDC27Q2M243 656 aa12.4□□□□□ -0.42
HERC1-206ENST00000559996 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
HERC1-206ENST00000559996 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 RIPK4P57078 832 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 HNRNPUQ00839 825 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC1-206ENST00000559996 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
HERC1-206ENST00000559996 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
HERC1-206ENST00000559996 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
HERC1-206ENST00000559996 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
HERC1-206ENST00000559996 POTEAQ6S8J7 498 aa12.38□□□□□ -0.43
HERC1-206ENST00000559996 IL17REQ8NFR9 667 aa12.38□□□□□ -0.43
HERC1-206ENST00000559996 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
HERC1-206ENST00000559996 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
HERC1-206ENST00000559996 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
HERC1-206ENST00000559996 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 PHKG2P15735 406 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
HERC1-206ENST00000559996 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
HERC1-206ENST00000559996 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
HERC1-206ENST00000559996 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
HERC1-206ENST00000559996 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
HERC1-206ENST00000559996 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
HERC1-206ENST00000559996 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
HERC1-206ENST00000559996 CDCA7Q9BWT1 371 aaPredicted RBP12.36□□□□□ -0.43
HERC1-206ENST00000559996 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
HERC1-206ENST00000559996 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
HERC1-206ENST00000559996 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
HERC1-206ENST00000559996 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
HERC1-206ENST00000559996 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
HERC1-206ENST00000559996 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
HERC1-206ENST00000559996 EXOC5O00471 708 aa12.35□□□□□ -0.43
HERC1-206ENST00000559996 MCM10Q7L590 875 aa12.35□□□□□ -0.43
HERC1-206ENST00000559996 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms