RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
ZEB1-217ENST00000559858 PIK3R4Q99570 1358 aa8□□□□□ -1.13
ZEB1-217ENST00000559858 SBNO2Q9Y2G9 1366 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 SMARCA5O60264 1052 aaPredicted RBP7.99□□□□□ -1.13
ZEB1-217ENST00000559858 SDSP20132 328 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 PLEKHF1Q96S99 279 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 DCTPP1Q9H773 170 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 PPRC1Q5VV67 1664 aaKnown RBP7.99□□□□□ -1.13
ZEB1-217ENST00000559858 PTPRTO14522 1441 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 TNNT1P13805 278 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 SPC24Q8NBT2 197 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
ZEB1-217ENST00000559858 SAMD9LQ8IVG5 1584 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 CD109Q6YHK3 1445 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 UBE2HP62256 183 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 MAPK8IP2Q13387 824 aaPredicted RBP7.98□□□□□ -1.13
ZEB1-217ENST00000559858 TRAPPC8Q9Y2L5 1435 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 ERICH4A6NGS2 130 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 AP5Z1O43299 807 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 FUCA2Q9BTY2 467 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 TRIM34Q9BYJ4 488 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 ATP10BO94823 1461 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 MYOM2P54296 1465 aa7.98□□□□□ -1.13
ZEB1-217ENST00000559858 ABCA8O94911 1581 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 FOXD4L6Q3SYB3 417 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 FOXD4L3Q6VB84 417 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 MRPL50Q8N5N7 158 aaKnown RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 SLC12A5Q9H2X9 1139 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 PTCH1Q13635 1447 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 PTGS1P23219 599 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 NAA30Q147X3 362 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 C16orf71Q8IYS4 520 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 C16orf45Q96MC5 204 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 CHMP4AQ9BY43 222 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-217ENST00000559858 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
ZEB1-217ENST00000559858 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.13
ZEB1-217ENST00000559858 MCCP23508 829 aa7.96□□□□□ -1.13
ZEB1-217ENST00000559858 KMT5BQ4FZB7 885 aa7.96□□□□□ -1.13
ZEB1-217ENST00000559858 EFCC1Q9HA90 598 aa7.96□□□□□ -1.13
ZEB1-217ENST00000559858 FEZ2Q9UHY8 353 aaPredicted RBP7.96□□□□□ -1.13
ZEB1-217ENST00000559858 USP32Q8NFA0 1604 aa7.96□□□□□ -1.13
ZEB1-217ENST00000559858 NSD2O96028 1365 aa7.96□□□□□ -1.13
ZEB1-217ENST00000559858 ABCC4O15439 1325 aa7.96□□□□□ -1.14
ZEB1-217ENST00000559858 SPAG9O60271 1321 aaKnown RBP7.96□□□□□ -1.14
ZEB1-217ENST00000559858 CYP2C19P33261 490 aa7.96□□□□□ -1.14
ZEB1-217ENST00000559858 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.14
ZEB1-217ENST00000559858 NOL10Q9BSC4 688 aaKnown RBP7.96□□□□□ -1.14
ZEB1-217ENST00000559858 TRPM2O94759 1503 aa7.96□□□□□ -1.14
ZEB1-217ENST00000559858 CCDC192P0DO97 292 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 HNRNPH2P55795 449 aaKnown RBP7.95□□□□□ -1.14
ZEB1-217ENST00000559858 ANAPC15P60006 121 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 GIMAP6Q6P9H5 292 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 CCDC186Q7Z3E2 898 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 RTL1A6NKG5 1358 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 KIF24Q5T7B8 1368 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 ATAD2Q6PL18 1390 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 VAMP4O75379 141 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 BMS1Q14692 1282 aaKnown RBP7.95□□□□□ -1.14
ZEB1-217ENST00000559858 TPD52L1Q16890 204 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-217ENST00000559858 RGS22Q8NE09 1264 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 KIF1BPQ96EK5 621 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
ZEB1-217ENST00000559858 SRCIN1Q9C0H9 1055 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 CNPY2Q9Y2B0 182 aa7.95□□□□□ -1.14
ZEB1-217ENST00000559858 RPAP1Q9BWH6 1393 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-217ENST00000559858 CHRM1P11229 460 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ATP6V1DQ9Y5K8 247 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 PREX2Q70Z35 1606 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 CDC42BPBQ9Y5S2 1711 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 TCHHQ07283 1943 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 SYCP2Q9BX26 1530 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 TNNT3P45378 269 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 RBM6P78332 1123 aaKnown RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 DRC7Q8IY82 874 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ANKRD44Q8N8A2 993 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 FAM200AQ8TCP9 573 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 OTUD7AQ8TE49 926 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ERO1AQ96HE7 468 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 YY1AP1Q9H869 796 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 MYO3AQ8NEV4 1616 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ZSCAN22P10073 491 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ZSCAN25Q6NSZ9 544 aa7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 RPAP2Q8IXW5 612 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 ZFP91Q96JP5 570 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-217ENST00000559858 LRMPQ12912 555 aa7.93□□□□□ -1.14
ZEB1-217ENST00000559858 FBXO38Q6PIJ6 1188 aa7.93□□□□□ -1.14
ZEB1-217ENST00000559858 NOL8Q76FK4 1167 aaKnown RBP7.93□□□□□ -1.14
ZEB1-217ENST00000559858 TRERF1Q96PN7 1200 aa7.93□□□□□ -1.14
ZEB1-217ENST00000559858 ZNF215Q9UL58 517 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-217ENST00000559858 RGS12O14924 1447 aa7.93□□□□□ -1.14
ZEB1-217ENST00000559858 CCDC171Q6TFL3 1326 aa7.93□□□□□ -1.14
ZEB1-217ENST00000559858 TEX35Q5T0J7 233 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms