RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 RGPD2P0DJD1 1756 aa29.9■■■□□ 2.38
CRNDE-203ENST00000557792 EMILIN1Q9Y6C2 1016 aa29.9■■■□□ 2.38
CRNDE-203ENST00000557792 YY1P25490 414 aa29.89■■■□□ 2.38
CRNDE-203ENST00000557792 DDX54Q8TDD1 881 aaKnown RBP29.89■■■□□ 2.38
CRNDE-203ENST00000557792 DCAF8L1A6NGE4 600 aa29.88■■■□□ 2.37
CRNDE-203ENST00000557792 NBPF6Q5VWK0 638 aa29.87■■■□□ 2.37
CRNDE-203ENST00000557792 NBPF4Q96M43 638 aa29.87■■■□□ 2.37
CRNDE-203ENST00000557792 KIF24Q5T7B8 1368 aa29.87■■■□□ 2.37
CRNDE-203ENST00000557792 MTFR1LQ9H019 292 aa29.86■■■□□ 2.37
CRNDE-203ENST00000557792 INSRP06213 1382 aa29.86■■■□□ 2.37
CRNDE-203ENST00000557792 FLT4P35916 1363 aa29.86■■■□□ 2.37
CRNDE-203ENST00000557792 PPM1GO15355 546 aaPredicted RBP29.85■■■□□ 2.37
CRNDE-203ENST00000557792 LRRC4BQ9NT99 713 aa29.85■■■□□ 2.37
CRNDE-203ENST00000557792 TNNT2P45379 298 aaPredicted RBP29.84■■■□□ 2.37
CRNDE-203ENST00000557792 POLKQ9UBT6 870 aa29.84■■■□□ 2.37
CRNDE-203ENST00000557792 SHANK3Q9BYB0 1731 aa29.83■■■□□ 2.37
CRNDE-203ENST00000557792 ZNF827Q17R98 1081 aa29.83■■■□□ 2.37
CRNDE-203ENST00000557792 KNSTRNQ9Y448 316 aa29.82■■■□□ 2.36
CRNDE-203ENST00000557792 USHBP1Q8N6Y0 703 aa29.81■■■□□ 2.36
CRNDE-203ENST00000557792 SGIP1Q9BQI5 828 aa29.81■■■□□ 2.36
CRNDE-203ENST00000557792 DOT1LQ8TEK3 1739 aa29.81■■■□□ 2.36
CRNDE-203ENST00000557792 MEGF6O75095 1541 aa29.81■■■□□ 2.36
CRNDE-203ENST00000557792 WASHC2AQ641Q2 1341 aa29.79■■■□□ 2.36
CRNDE-203ENST00000557792 ZCRB1Q8TBF4 217 aaKnown RBP29.79■■■□□ 2.36
CRNDE-203ENST00000557792 SMG6Q86US8 1419 aaKnown RBP29.79■■■□□ 2.36
CRNDE-203ENST00000557792 PRIM1P49642 420 aaKnown RBP29.78■■■□□ 2.36
CRNDE-203ENST00000557792 SYTL4Q96C24 671 aaPredicted RBP29.78■■■□□ 2.36
CRNDE-203ENST00000557792 FHDC1Q9C0D6 1143 aaPredicted RBP29.78■■■□□ 2.36
CRNDE-203ENST00000557792 SLC27A3Q5K4L6 730 aa29.77■■■□□ 2.36
CRNDE-203ENST00000557792 SYT17Q9BSW7 474 aa29.77■■■□□ 2.36
CRNDE-203ENST00000557792 NSD2O96028 1365 aa29.77■■■□□ 2.36
CRNDE-203ENST00000557792 AKT1S1Q96B36 256 aa29.76■■■□□ 2.35
CRNDE-203ENST00000557792 QSER1Q2KHR3 1735 aa29.75■■■□□ 2.35
CRNDE-203ENST00000557792 AMER1Q5JTC6 1135 aaPredicted RBP29.75■■■□□ 2.35
CRNDE-203ENST00000557792 MORC1Q86VD1 984 aa29.75■■■□□ 2.35
CRNDE-203ENST00000557792 PER1O15534 1290 aaPredicted RBP29.74■■■□□ 2.35
CRNDE-203ENST00000557792 UTRNP46939 3433 aa29.74■■■□□ 2.35
CRNDE-203ENST00000557792 LY75O60449 1722 aa29.74■■■□□ 2.35
CRNDE-203ENST00000557792 KCNQ4P56696 695 aa29.72■■■□□ 2.35
CRNDE-203ENST00000557792 RAPGEF4Q8WZA2 1011 aa29.72■■■□□ 2.35
CRNDE-203ENST00000557792 ARXQ96QS3 562 aa29.72■■■□□ 2.35
CRNDE-203ENST00000557792 TUBGCP6Q96RT7 1819 aa29.71■■■□□ 2.35
CRNDE-203ENST00000557792 MAP2P11137 1827 aaKnown RBP29.69■■■□□ 2.34
CRNDE-203ENST00000557792 TATP17735 454 aaPredicted RBP29.69■■■□□ 2.34
CRNDE-203ENST00000557792 EYA1Q99502 592 aa29.69■■■□□ 2.34
CRNDE-203ENST00000557792 PNPLA7Q6ZV29 1317 aa29.68■■■□□ 2.34
CRNDE-203ENST00000557792 ANKRD26Q9UPS8 1709 aa29.68■■■□□ 2.34
CRNDE-203ENST00000557792 EIF4A2Q14240 407 aaKnown RBP29.67■■■□□ 2.34
CRNDE-203ENST00000557792 SLC16A10Q8TF71 515 aa29.67■■■□□ 2.34
CRNDE-203ENST00000557792 TFCP2L1Q9NZI6 479 aa29.66■■■□□ 2.34
CRNDE-203ENST00000557792 MAP3K5Q99683 1374 aa29.65■■■□□ 2.34
CRNDE-203ENST00000557792 COL24A1Q17RW2 1714 aa29.65■■■□□ 2.34
CRNDE-203ENST00000557792 CCNL1Q9UK58 526 aaPredicted RBP29.63■■■□□ 2.33
CRNDE-203ENST00000557792 CC2D1BQ5T0F9 858 aaKnown RBP29.62■■■□□ 2.33
CRNDE-203ENST00000557792 NCAPD2Q15021 1401 aa29.61■■■□□ 2.33
CRNDE-203ENST00000557792 CHD4Q14839 1912 aa29.6■■■□□ 2.33
CRNDE-203ENST00000557792 PCDH11XQ9BZA7 1347 aa29.6■■■□□ 2.33
CRNDE-203ENST00000557792 PCDH11YQ9BZA8 1340 aa29.6■■■□□ 2.33
CRNDE-203ENST00000557792 POLD1P28340 1107 aa29.59■■■□□ 2.33
CRNDE-203ENST00000557792 CYP27B1O15528 508 aa29.56■■■□□ 2.32
CRNDE-203ENST00000557792 PKD1L3Q7Z443 1732 aa29.55■■■□□ 2.32
CRNDE-203ENST00000557792 C5P01031 1676 aa29.54■■■□□ 2.32
CRNDE-203ENST00000557792 IGSF1Q8N6C5 1336 aa29.54■■■□□ 2.32
CRNDE-203ENST00000557792 MTHFSP49914 203 aa29.54■■■□□ 2.32
CRNDE-203ENST00000557792 CNGB1Q14028 1251 aaPredicted RBP29.54■■■□□ 2.32
CRNDE-203ENST00000557792 KLHL34Q8N239 644 aa29.54■■■□□ 2.32
CRNDE-203ENST00000557792 TOGARAM1Q9Y4F4 1720 aa29.54■■■□□ 2.32
CRNDE-203ENST00000557792 ITGB4P16144 1822 aa29.53■■■□□ 2.32
CRNDE-203ENST00000557792 SPG7Q9UQ90 795 aa29.53■■■□□ 2.32
CRNDE-203ENST00000557792 NPC1L1Q9UHC9 1359 aa29.52■■■□□ 2.32
CRNDE-203ENST00000557792 MPRIPQ6WCQ1 1025 aa29.52■■■□□ 2.32
CRNDE-203ENST00000557792 COL23A1Q86Y22 540 aaPredicted RBP29.52■■■□□ 2.32
CRNDE-203ENST00000557792 ZNF784Q8NCA9 323 aaPredicted RBP29.52■■■□□ 2.32
CRNDE-203ENST00000557792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.52■■■□□ 2.32
CRNDE-203ENST00000557792 GOLGB1Q14789 3259 aaKnown RBP29.52■■■□□ 2.32
CRNDE-203ENST00000557792 TAF1LQ8IZX4 1826 aa29.51■■■□□ 2.31
CRNDE-203ENST00000557792 PALLDQ8WX93 1383 aa29.51■■■□□ 2.31
CRNDE-203ENST00000557792 MSH5O43196 834 aa29.5■■■□□ 2.31
CRNDE-203ENST00000557792 IL13P35225 146 aa29.5■■■□□ 2.31
CRNDE-203ENST00000557792 GPR162Q16538 588 aa29.49■■■□□ 2.31
CRNDE-203ENST00000557792 NKX1-1Q15270 411 aaPredicted RBP29.47■■■□□ 2.31
CRNDE-203ENST00000557792 AEBP1Q8IUX7 1158 aa29.46■■■□□ 2.31
CRNDE-203ENST00000557792 NLGN2Q8NFZ4 835 aa29.46■■■□□ 2.31
CRNDE-203ENST00000557792 HMGB2P26583 209 aaKnown RBP29.43■■■□□ 2.3
CRNDE-203ENST00000557792 MSL1Q68DK7 614 aa29.43■■■□□ 2.3
CRNDE-203ENST00000557792 SULT6B1Q6IMI4 303 aa29.43■■■□□ 2.3
CRNDE-203ENST00000557792 SMARCC1Q92922 1105 aaPredicted RBP29.43■■■□□ 2.3
CRNDE-203ENST00000557792 PHKG2P15735 406 aa29.42■■■□□ 2.3
CRNDE-203ENST00000557792 IFNL2Q8IZJ0 200 aa29.42■■■□□ 2.3
CRNDE-203ENST00000557792 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
CRNDE-203ENST00000557792 PIGBQ92521 554 aa29.42■■■□□ 2.3
CRNDE-203ENST00000557792 C4BP0C0L5 1744 aa29.42■■■□□ 2.3
CRNDE-203ENST00000557792 PLEKHO1Q53GL0 409 aaPredicted RBP29.4■■■□□ 2.3
CRNDE-203ENST00000557792 FLAD1Q8NFF5 587 aa29.39■■■□□ 2.3
CRNDE-203ENST00000557792 PLEKHG2Q9H7P9 1386 aa29.39■■■□□ 2.29
CRNDE-203ENST00000557792 DIAPH1O60610 1272 aaKnown RBP29.38■■■□□ 2.29
CRNDE-203ENST00000557792 AMOTQ4VCS5 1084 aa29.37■■■□□ 2.29
CRNDE-203ENST00000557792 KDRP35968 1356 aa29.37■■■□□ 2.29
CRNDE-203ENST00000557792 UBR3Q6ZT12 1888 aa29.36■■■□□ 2.29
CRNDE-203ENST00000557792 AMIGO3Q86WK7 504 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms