RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 PROM2Q8N271 834 aa16.51■□□□□ 0.23
RCCD1-209ENST00000557750 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
RCCD1-209ENST00000557750 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
RCCD1-209ENST00000557750 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
RCCD1-209ENST00000557750 RGPD3A6NKT7 1758 aaPredicted RBP16.5■□□□□ 0.23
RCCD1-209ENST00000557750 RGPD4Q7Z3J3 1758 aa16.5■□□□□ 0.23
RCCD1-209ENST00000557750 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
RCCD1-209ENST00000557750 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
RCCD1-209ENST00000557750 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
RCCD1-209ENST00000557750 BCL9O00512 1426 aa16.48■□□□□ 0.23
RCCD1-209ENST00000557750 CASZ1Q86V15 1759 aa16.47■□□□□ 0.23
RCCD1-209ENST00000557750 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
RCCD1-209ENST00000557750 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
RCCD1-209ENST00000557750 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
RCCD1-209ENST00000557750 ANP32CO43423 234 aa16.46■□□□□ 0.23
RCCD1-209ENST00000557750 CFAP53Q96M91 514 aa16.46■□□□□ 0.23
RCCD1-209ENST00000557750 RGPD5Q99666 1765 aa16.46■□□□□ 0.23
RCCD1-209ENST00000557750 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
RCCD1-209ENST00000557750 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
RCCD1-209ENST00000557750 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
RCCD1-209ENST00000557750 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
RCCD1-209ENST00000557750 PTGER2P43116 358 aa16.45■□□□□ 0.22
RCCD1-209ENST00000557750 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
RCCD1-209ENST00000557750 EXOC5O00471 708 aa16.44■□□□□ 0.22
RCCD1-209ENST00000557750 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
RCCD1-209ENST00000557750 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
RCCD1-209ENST00000557750 DIAPH1O60610 1272 aaKnown RBP16.43■□□□□ 0.22
RCCD1-209ENST00000557750 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
RCCD1-209ENST00000557750 IL13P35225 146 aa16.43■□□□□ 0.22
RCCD1-209ENST00000557750 EYA1Q99502 592 aa16.43■□□□□ 0.22
RCCD1-209ENST00000557750 SLC15A2Q16348 729 aa16.42■□□□□ 0.22
RCCD1-209ENST00000557750 IL2RBP14784 551 aa16.4■□□□□ 0.22
RCCD1-209ENST00000557750 UTRNP46939 3433 aa16.4■□□□□ 0.22
RCCD1-209ENST00000557750 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
RCCD1-209ENST00000557750 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
RCCD1-209ENST00000557750 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
RCCD1-209ENST00000557750 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
RCCD1-209ENST00000557750 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
RCCD1-209ENST00000557750 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
RCCD1-209ENST00000557750 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
RCCD1-209ENST00000557750 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
RCCD1-209ENST00000557750 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
RCCD1-209ENST00000557750 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
RCCD1-209ENST00000557750 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
RCCD1-209ENST00000557750 SYT17Q9BSW7 474 aa16.37■□□□□ 0.21
RCCD1-209ENST00000557750 MTFR1LQ9H019 292 aa16.37■□□□□ 0.21
RCCD1-209ENST00000557750 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
RCCD1-209ENST00000557750 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
RCCD1-209ENST00000557750 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
RCCD1-209ENST00000557750 HMOX1P09601 288 aa16.36■□□□□ 0.21
RCCD1-209ENST00000557750 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
RCCD1-209ENST00000557750 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
RCCD1-209ENST00000557750 MEGF6O75095 1541 aa16.35■□□□□ 0.21
RCCD1-209ENST00000557750 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
RCCD1-209ENST00000557750 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.214e-12■■□□□ 12.7
RCCD1-209ENST00000557750 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
RCCD1-209ENST00000557750 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
RCCD1-209ENST00000557750 ARXQ96QS3 562 aa16.33■□□□□ 0.2
RCCD1-209ENST00000557750 KDRP35968 1356 aa16.33■□□□□ 0.2
RCCD1-209ENST00000557750 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
RCCD1-209ENST00000557750 ZNF827Q17R98 1081 aa16.31■□□□□ 0.2
RCCD1-209ENST00000557750 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
RCCD1-209ENST00000557750 DDX54Q8TDD1 881 aaKnown RBP16.3■□□□□ 0.2
RCCD1-209ENST00000557750 LRRC4BQ9NT99 713 aa16.3■□□□□ 0.2
RCCD1-209ENST00000557750 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
RCCD1-209ENST00000557750 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
RCCD1-209ENST00000557750 MRS2Q9HD23 443 aa16.3■□□□□ 0.2
RCCD1-209ENST00000557750 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
RCCD1-209ENST00000557750 BTAF1O14981 1849 aa16.29■□□□□ 0.2
RCCD1-209ENST00000557750 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
RCCD1-209ENST00000557750 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-209ENST00000557750 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
RCCD1-209ENST00000557750 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
RCCD1-209ENST00000557750 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
RCCD1-209ENST00000557750 FCHSD2O94868 740 aa16.27■□□□□ 0.2
RCCD1-209ENST00000557750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.21e-8■■□□□ 11.4
RCCD1-209ENST00000557750 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
RCCD1-209ENST00000557750 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.19
RCCD1-209ENST00000557750 AKT1S1Q96B36 256 aa16.27■□□□□ 0.19
RCCD1-209ENST00000557750 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
RCCD1-209ENST00000557750 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
RCCD1-209ENST00000557750 CYP27B1O15528 508 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 NEFMP07197 916 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
RCCD1-209ENST00000557750 CHD4Q14839 1912 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 GPR162Q16538 588 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
RCCD1-209ENST00000557750 ADAMTS8Q9UP79 889 aa16.24■□□□□ 0.19
RCCD1-209ENST00000557750 KCNQ4P56696 695 aa16.23■□□□□ 0.19
RCCD1-209ENST00000557750 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
RCCD1-209ENST00000557750 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
RCCD1-209ENST00000557750 MIER1Q8N108 512 aa16.23■□□□□ 0.19
RCCD1-209ENST00000557750 SLC16A10Q8TF71 515 aa16.23■□□□□ 0.19
RCCD1-209ENST00000557750 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
RCCD1-209ENST00000557750 PHKG2P15735 406 aa16.22■□□□□ 0.19
RCCD1-209ENST00000557750 C1QTNF8P60827 252 aa16.22■□□□□ 0.19
RCCD1-209ENST00000557750 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
RCCD1-209ENST00000557750 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms