RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
HIF1A-210ENST00000557206 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
HIF1A-210ENST00000557206 CDCA8Q53HL2 280 aa9.7□□□□□ -0.86
HIF1A-210ENST00000557206 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
HIF1A-210ENST00000557206 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
HIF1A-210ENST00000557206 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
HIF1A-210ENST00000557206 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
HIF1A-210ENST00000557206 TIMP2P16035 220 aa9.69□□□□□ -0.86
HIF1A-210ENST00000557206 SCTRP47872 440 aa9.69□□□□□ -0.86
HIF1A-210ENST00000557206 PSME1Q06323 249 aa9.69□□□□□ -0.86
HIF1A-210ENST00000557206 RASA1P20936 1047 aa9.68□□□□□ -0.86
HIF1A-210ENST00000557206 ZNF787Q6DD87 383 aa9.68□□□□□ -0.86
HIF1A-210ENST00000557206 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
HIF1A-210ENST00000557206 RBM19Q9Y4C8 960 aaKnown RBP9.68□□□□□ -0.86
HIF1A-210ENST00000557206 GTF2IP78347 998 aa9.67□□□□□ -0.86
HIF1A-210ENST00000557206 KANK4Q5T7N3 995 aaPredicted RBP9.67□□□□□ -0.86
HIF1A-210ENST00000557206 CYP2U1Q7Z449 544 aa9.67□□□□□ -0.86
HIF1A-210ENST00000557206 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
HIF1A-210ENST00000557206 LILRA1O75019 489 aa9.66□□□□□ -0.86
HIF1A-210ENST00000557206 UPP2O95045 317 aa9.66□□□□□ -0.86
HIF1A-210ENST00000557206 CBLBQ13191 982 aa9.66□□□□□ -0.86
HIF1A-210ENST00000557206 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
HIF1A-210ENST00000557206 DNAAF2Q9NVR5 837 aaKnown RBP9.66□□□□□ -0.86
HIF1A-210ENST00000557206 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
HIF1A-210ENST00000557206 CTC1Q2NKJ3 1217 aa9.65□□□□□ -0.86
HIF1A-210ENST00000557206 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
HIF1A-210ENST00000557206 AVPP01185 164 aa9.64□□□□□ -0.87
HIF1A-210ENST00000557206 ADH1AP07327 375 aa9.64□□□□□ -0.87
HIF1A-210ENST00000557206 Q6ZVU0 165 aa9.64□□□□□ -0.87
HIF1A-210ENST00000557206 AXIN1O15169 862 aa9.63□□□□□ -0.87
HIF1A-210ENST00000557206 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
HIF1A-210ENST00000557206 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
HIF1A-210ENST00000557206 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
HIF1A-210ENST00000557206 GNRH1P01148 92 aa9.62□□□□□ -0.87
HIF1A-210ENST00000557206 CLDN10P78369 228 aa9.62□□□□□ -0.87
HIF1A-210ENST00000557206 RELBQ01201 579 aa9.62□□□□□ -0.87
HIF1A-210ENST00000557206 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
HIF1A-210ENST00000557206 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L21D6R901 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
HIF1A-210ENST00000557206 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 ESCO1Q5FWF5 840 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 CCDC102BQ68D86 513 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 MEIOBQ8N635 442 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 AGBL1Q96MI9 1066 aa9.61□□□□□ -0.87
HIF1A-210ENST00000557206 ATG7O95352 703 aa9.6□□□□□ -0.87
HIF1A-210ENST00000557206 CSB-PGBD3P0DP91 1061 aa9.6□□□□□ -0.87
HIF1A-210ENST00000557206 PTGIRP43119 386 aa9.6□□□□□ -0.87
HIF1A-210ENST00000557206 SCARF1Q14162 830 aa9.6□□□□□ -0.87
HIF1A-210ENST00000557206 CRTC2Q53ET0 693 aaPredicted RBP9.6□□□□□ -0.87
HIF1A-210ENST00000557206 TPCN2Q8NHX9 752 aa9.6□□□□□ -0.87
HIF1A-210ENST00000557206 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
HIF1A-210ENST00000557206 PTK7Q13308 1070 aa9.59□□□□□ -0.87
HIF1A-210ENST00000557206 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
HIF1A-210ENST00000557206 NLRP3Q96P20 1036 aa9.59□□□□□ -0.87
HIF1A-210ENST00000557206 ZNF395Q9H8N7 513 aaPredicted RBP9.59□□□□□ -0.87
HIF1A-210ENST00000557206 ARHGEF10LQ9HCE6 1279 aa9.59□□□□□ -0.87
HIF1A-210ENST00000557206 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
HIF1A-210ENST00000557206 BACH1O14867 736 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 ZBTB7BO15156 539 aaPredicted RBP9.58□□□□□ -0.88
HIF1A-210ENST00000557206 BMP2P12643 396 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 GDF10P55107 478 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 ANKMY2Q8IV38 441 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 SIX5Q8N196 739 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
HIF1A-210ENST00000557206 A0A1W2PRU2 124 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 MEN1O00255 615 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 SEC13P55735 322 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 DPYDQ12882 1025 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 ELOAQ14241 798 aaKnown RBP9.57□□□□□ -0.88
HIF1A-210ENST00000557206 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 MRPL14Q6P1L8 145 aaKnown RBP9.57□□□□□ -0.88
HIF1A-210ENST00000557206 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
HIF1A-210ENST00000557206 INHAP05111 366 aa9.56□□□□□ -0.88
HIF1A-210ENST00000557206 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
HIF1A-210ENST00000557206 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
HIF1A-210ENST00000557206 ETNK1Q9HBU6 452 aa9.56□□□□□ -0.88
HIF1A-210ENST00000557206 STAU1O95793 577 aaKnown RBP9.55□□□□□ -0.88
HIF1A-210ENST00000557206 BMP1P13497 986 aa9.55□□□□□ -0.88
HIF1A-210ENST00000557206 PDE4CQ08493 712 aa9.55□□□□□ -0.88
HIF1A-210ENST00000557206 ZNF775Q96BV0 537 aaPredicted RBP9.55□□□□□ -0.88
HIF1A-210ENST00000557206 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
HIF1A-210ENST00000557206 AAASQ9NRG9 546 aa9.55□□□□□ -0.88
HIF1A-210ENST00000557206 SERTAD1Q9UHV2 236 aa9.55□□□□□ -0.88
HIF1A-210ENST00000557206 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
HIF1A-210ENST00000557206 ST8SIA5O15466 376 aa9.54□□□□□ -0.88
HIF1A-210ENST00000557206 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
HIF1A-210ENST00000557206 SCNN1DP51172 638 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms