RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 GOLGA6L3A6NEY3 463 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 KCNA6P17658 529 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 GPTP24298 496 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 METTL24Q5JXM2 366 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 C19orf44Q9H6X5 657 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
PTPN21-208ENST00000556564 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
PTPN21-208ENST00000556564 NSD2O96028 1365 aa20.87■□□□□ 0.93
PTPN21-208ENST00000556564 LARP1Q6PKG0 1096 aaKnown RBP20.87■□□□□ 0.93
PTPN21-208ENST00000556564 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
PTPN21-208ENST00000556564 DDX49Q9Y6V7 483 aaKnown RBP20.87■□□□□ 0.93
PTPN21-208ENST00000556564 TRMT112Q9UI30 125 aaKnown RBP20.87■□□□□ 0.93
PTPN21-208ENST00000556564 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
PTPN21-208ENST00000556564 FAM83GA6ND36 823 aa20.87■□□□□ 0.93
PTPN21-208ENST00000556564 ANKIB1Q9P2G1 1089 aa20.87■□□□□ 0.93
PTPN21-208ENST00000556564 ZBTB3Q9H5J0 574 aa20.86■□□□□ 0.93
PTPN21-208ENST00000556564 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
PTPN21-208ENST00000556564 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
PTPN21-208ENST00000556564 BICD2Q8TD16 824 aa20.86■□□□□ 0.93
PTPN21-208ENST00000556564 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
PTPN21-208ENST00000556564 TSPOAP1O95153 1857 aa20.85■□□□□ 0.93
PTPN21-208ENST00000556564 F6X3S4 739 aa20.85■□□□□ 0.93
PTPN21-208ENST00000556564 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
PTPN21-208ENST00000556564 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
PTPN21-208ENST00000556564 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
PTPN21-208ENST00000556564 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
PTPN21-208ENST00000556564 SHANK2Q9UPX8 1470 aa20.84■□□□□ 0.93
PTPN21-208ENST00000556564 DEKP35659 375 aaKnown RBP20.84■□□□□ 0.93
PTPN21-208ENST00000556564 NUTM1Q86Y26 1132 aa20.83■□□□□ 0.93
PTPN21-208ENST00000556564 NACAP1Q9BZK3 213 aa20.83■□□□□ 0.93
PTPN21-208ENST00000556564 ABCC1P33527 1531 aa20.83■□□□□ 0.93
PTPN21-208ENST00000556564 TPM2P07951 284 aa20.83■□□□□ 0.93
PTPN21-208ENST00000556564 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.92
PTPN21-208ENST00000556564 XBP1P17861 261 aa20.83■□□□□ 0.92
PTPN21-208ENST00000556564 LRRC59Q96AG4 307 aaKnown RBP20.83■□□□□ 0.92
PTPN21-208ENST00000556564 ZSCAN25Q6NSZ9 544 aa20.82■□□□□ 0.92
PTPN21-208ENST00000556564 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
PTPN21-208ENST00000556564 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
PTPN21-208ENST00000556564 ABCF2Q9UG63 623 aa20.82■□□□□ 0.92
PTPN21-208ENST00000556564 ZFYVE16Q7Z3T8 1539 aa20.82■□□□□ 0.92
PTPN21-208ENST00000556564 DNMT1P26358 1616 aaKnown RBP20.81■□□□□ 0.92
PTPN21-208ENST00000556564 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
PTPN21-208ENST00000556564 RFC4P35249 363 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 CHD1O14646 1710 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 GOLGA6L19H0YKK7 550 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 HYPKQ9NX55 129 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 GLIPR1L2Q4G1C9 344 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 MAST1Q9Y2H9 1570 aa20.81■□□□□ 0.92
PTPN21-208ENST00000556564 NOC3LQ8WTT2 800 aaKnown RBP20.8■□□□□ 0.92
PTPN21-208ENST00000556564 EXOC6BQ9Y2D4 811 aa20.8■□□□□ 0.92
PTPN21-208ENST00000556564 BECN2A8MW95 431 aa20.8■□□□□ 0.92
PTPN21-208ENST00000556564 HSP90AB3PQ58FF7 597 aa20.8■□□□□ 0.92
PTPN21-208ENST00000556564 PCMTD1Q96MG8 357 aaPredicted RBP20.79■□□□□ 0.92
PTPN21-208ENST00000556564 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 CHD1LQ86WJ1 897 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 SSH1Q8WYL5 1049 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 MAP3K2Q9Y2U5 619 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 TDO2P48775 406 aa20.79■□□□□ 0.92
PTPN21-208ENST00000556564 DDB1Q16531 1140 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
PTPN21-208ENST00000556564 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
PTPN21-208ENST00000556564 ATP6V1AP38606 617 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 DNAAF4Q8WXU2 420 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
PTPN21-208ENST00000556564 CAVIN4Q5BKX8 364 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
PTPN21-208ENST00000556564 NPATQ14207 1427 aa20.77■□□□□ 0.92
PTPN21-208ENST00000556564 STK3Q13188 491 aa20.77■□□□□ 0.92
PTPN21-208ENST00000556564 CWC27Q6UX04 472 aaKnown RBP20.77■□□□□ 0.92
PTPN21-208ENST00000556564 CEP89Q96ST8 783 aa20.77■□□□□ 0.92
PTPN21-208ENST00000556564 NEK4P51957 841 aa20.77■□□□□ 0.91
PTPN21-208ENST00000556564 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
PTPN21-208ENST00000556564 SMARCA5O60264 1052 aaPredicted RBP20.76■□□□□ 0.91
PTPN21-208ENST00000556564 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
PTPN21-208ENST00000556564 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.76■□□□□ 0.91
PTPN21-208ENST00000556564 A0A087WZG4 1122 aa20.76■□□□□ 0.91
PTPN21-208ENST00000556564 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
PTPN21-208ENST00000556564 HOOK1Q9UJC3 728 aaKnown RBP20.76■□□□□ 0.91
PTPN21-208ENST00000556564 CCDC69A6NI79 296 aa20.75■□□□□ 0.91
PTPN21-208ENST00000556564 SLC39A6Q13433 755 aa20.75■□□□□ 0.91
PTPN21-208ENST00000556564 TSR1Q2NL82 804 aaKnown RBP20.75■□□□□ 0.91
PTPN21-208ENST00000556564 JARID2Q92833 1246 aaPredicted RBP20.75■□□□□ 0.91
PTPN21-208ENST00000556564 YTHDC2Q9H6S0 1430 aaKnown RBP20.75■□□□□ 0.91
PTPN21-208ENST00000556564 ZNF622Q969S3 477 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTPN21-208ENST00000556564 AKAP2Q9Y2D5 859 aa20.75■□□□□ 0.91
PTPN21-208ENST00000556564 MBIPQ9NS73 344 aa20.74■□□□□ 0.91
PTPN21-208ENST00000556564 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
PTPN21-208ENST00000556564 ANXA1P04083 346 aa20.74■□□□□ 0.91
PTPN21-208ENST00000556564 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
PTPN21-208ENST00000556564 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
PTPN21-208ENST00000556564 ANKRD18BA2A2Z9 1011 aa20.74■□□□□ 0.91
PTPN21-208ENST00000556564 MPHOSPH10O00566 681 aaKnown RBP20.74■□□□□ 0.91
PTPN21-208ENST00000556564 SAMD9Q5K651 1589 aa20.74■□□□□ 0.91
PTPN21-208ENST00000556564 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
PTPN21-208ENST00000556564 SNRPA1P09661 255 aaKnown RBP20.73■□□□□ 0.91
PTPN21-208ENST00000556564 LRRFIP2Q9Y608 721 aaKnown RBP20.73■□□□□ 0.91
PTPN21-208ENST00000556564 RARSP54136 660 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms