RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
PRKCH-220ENST00000556164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
PRKCH-220ENST00000556164 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
PRKCH-220ENST00000556164 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-220ENST00000556164 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-220ENST00000556164 TTC21AQ8NDW8 1320 aa8.34□□□□□ -1.07
PRKCH-220ENST00000556164 PAPPAQ13219 1627 aa8.34□□□□□ -1.07
PRKCH-220ENST00000556164 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-220ENST00000556164 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
PRKCH-220ENST00000556164 SYT17Q9BSW7 474 aa8.34□□□□□ -1.07
PRKCH-220ENST00000556164 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-220ENST00000556164 MTFR1LQ9H019 292 aa8.34□□□□□ -1.07
PRKCH-220ENST00000556164 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
PRKCH-220ENST00000556164 USP54Q70EL1 1684 aa8.34□□□□□ -1.08
PRKCH-220ENST00000556164 QSER1Q2KHR3 1735 aa8.33□□□□□ -1.08
PRKCH-220ENST00000556164 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
PRKCH-220ENST00000556164 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
PRKCH-220ENST00000556164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.32□□□□□ -1.08
PRKCH-220ENST00000556164 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
PRKCH-220ENST00000556164 SGIP1Q9BQI5 828 aa8.32□□□□□ -1.08
PRKCH-220ENST00000556164 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
PRKCH-220ENST00000556164 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
PRKCH-220ENST00000556164 IL2RBP14784 551 aa8.31□□□□□ -1.08
PRKCH-220ENST00000556164 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-220ENST00000556164 CIZ1Q9ULV3 898 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-220ENST00000556164 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
PRKCH-220ENST00000556164 ERBB3P21860 1342 aa8.3□□□□□ -1.08
PRKCH-220ENST00000556164 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
PRKCH-220ENST00000556164 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
PRKCH-220ENST00000556164 ZBTB47Q9UFB7 747 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-220ENST00000556164 UTRNP46939 3433 aa8.3□□□□□ -1.08
PRKCH-220ENST00000556164 COL24A1Q17RW2 1714 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 C1QBPQ07021 282 aaKnown RBP8.29□□□□□ -1.08
PRKCH-220ENST00000556164 GPR162Q16538 588 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 NME9Q86XW9 330 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 ANKRD24Q8TF21 1146 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 MAP3K5Q99683 1374 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 RGPD2P0DJD1 1756 aa8.29□□□□□ -1.08
PRKCH-220ENST00000556164 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 C1QTNF8P60827 252 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
PRKCH-220ENST00000556164 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 SIN3AQ96ST3 1273 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 RYDENQ9NUL5 291 aaKnown RBP8.28□□□□□ -1.08
PRKCH-220ENST00000556164 LY75O60449 1722 aa8.28□□□□□ -1.08
PRKCH-220ENST00000556164 SBNO2Q9Y2G9 1366 aa8.27□□□□□ -1.09
PRKCH-220ENST00000556164 SHANK3Q9BYB0 1731 aa8.27□□□□□ -1.09
PRKCH-220ENST00000556164 POLD1P28340 1107 aa8.27□□□□□ -1.09
PRKCH-220ENST00000556164 NEUROD1Q13562 356 aa8.27□□□□□ -1.09
PRKCH-220ENST00000556164 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
PRKCH-220ENST00000556164 HDGFL2Q7Z4V5 671 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-220ENST00000556164 DDX54Q8TDD1 881 aaKnown RBP8.27□□□□□ -1.09
PRKCH-220ENST00000556164 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-220ENST00000556164 SLC27A3Q5K4L6 730 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-220ENST00000556164 LTV1Q96GA3 475 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-220ENST00000556164 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 TFCP2L1Q9NZI6 479 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
PRKCH-220ENST00000556164 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
PRKCH-220ENST00000556164 KCNQ4P56696 695 aa8.25□□□□□ -1.09
PRKCH-220ENST00000556164 SLC12A5Q9H2X9 1139 aa8.25□□□□□ -1.09
PRKCH-220ENST00000556164 A0A1W2PP64 1363 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 MIER1Q8N108 512 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 NLGN2Q8NFZ4 835 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 IP6K1Q92551 441 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 CARD11Q9BXL7 1154 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 TERF2IPQ9NYB0 399 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 C5P01031 1676 aa8.24□□□□□ -1.09
PRKCH-220ENST00000556164 ANKRD36BQ8N2N9 1353 aa8.23□□□□□ -1.09
PRKCH-220ENST00000556164 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
PRKCH-220ENST00000556164 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
PRKCH-220ENST00000556164 NSD2O96028 1365 aa8.22□□□□□ -1.09
PRKCH-220ENST00000556164 AMPHP49418 695 aa8.22□□□□□ -1.09
PRKCH-220ENST00000556164 RNF25Q96BH1 459 aaPredicted RBP8.22□□□□□ -1.09
PRKCH-220ENST00000556164 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
PRKCH-220ENST00000556164 MEGF6O75095 1541 aa8.22□□□□□ -1.09
PRKCH-220ENST00000556164 YBX3P16989 372 aaKnown RBP eCLIP8.21□□□□□ -1.1
PRKCH-220ENST00000556164 HOXC9P31274 260 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 MSL1Q68DK7 614 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 ZCRB1Q8TBF4 217 aaKnown RBP8.21□□□□□ -1.1
PRKCH-220ENST00000556164 COG3Q96JB2 828 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
PRKCH-220ENST00000556164 ITGB4P16144 1822 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 GOLGB1Q14789 3259 aaKnown RBP8.21□□□□□ -1.1
PRKCH-220ENST00000556164 USP47Q96K76 1375 aa8.21□□□□□ -1.1
PRKCH-220ENST00000556164 KIF20BQ96Q89 1820 aa8.2□□□□□ -1.1
PRKCH-220ENST00000556164 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
PRKCH-220ENST00000556164 FBLN1P23142 703 aa8.2□□□□□ -1.1
PRKCH-220ENST00000556164 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
PRKCH-220ENST00000556164 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-220ENST00000556164 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
PRKCH-220ENST00000556164 RTL1A6NKG5 1358 aa8.19□□□□□ -1.1
PRKCH-220ENST00000556164 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms