RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CC2D2BQ6DHV5 1058 aa6.32□□□□□ -1.4
SRP54-209ENST00000555746 LARGE2Q8N3Y3 721 aa6.32□□□□□ -1.4
SRP54-209ENST00000555746 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
SRP54-209ENST00000555746 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
SRP54-209ENST00000555746 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
SRP54-209ENST00000555746 LILRA1O75019 489 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 DKK1O94907 266 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 MYCP01106 439 aaPredicted RBP6.31□□□□□ -1.4
SRP54-209ENST00000555746 RASA1P20936 1047 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 SCTRP47872 440 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 GTF2IP78347 998 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 CLDN10P78369 228 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 NNTQ13423 1086 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 LARP1Q6PKG0 1096 aaKnown RBP6.31□□□□□ -1.4
SRP54-209ENST00000555746 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 SIX5Q8N196 739 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 OGFOD1Q8N543 542 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 ZNF784Q8NCA9 323 aaPredicted RBP6.31□□□□□ -1.4
SRP54-209ENST00000555746 TRAIPQ9BWF2 469 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
SRP54-209ENST00000555746 TMPRSS4Q9NRS4 437 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 ZMIZ1Q9ULJ6 1067 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 WASF2Q9Y6W5 498 aa6.31□□□□□ -1.4
SRP54-209ENST00000555746 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
SRP54-209ENST00000555746 J3QL48 77 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 CSB-PGBD3P0DP91 1061 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 SMPD1P17405 629 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 MYT1Q01538 1121 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 OSBPL3Q9H4L5 887 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 DNAAF2Q9NVR5 837 aaKnown RBP6.3□□□□□ -1.4
SRP54-209ENST00000555746 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
SRP54-209ENST00000555746 NOVA2Q9UNW9 492 aaKnown RBP6.3□□□□□ -1.4
SRP54-209ENST00000555746 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
SRP54-209ENST00000555746 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
SRP54-209ENST00000555746 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
SRP54-209ENST00000555746 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
SRP54-209ENST00000555746 CYLDQ9NQC7 956 aa6.28□□□□□ -1.4
SRP54-209ENST00000555746 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
SRP54-209ENST00000555746 PDIA4P13667 645 aaKnown RBP6.27□□□□□ -1.41
SRP54-209ENST00000555746 DPYDQ12882 1025 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 TMEM164Q5U3C3 297 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 CCDC102BQ68D86 513 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 Q6ZVU0 165 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 CYP2U1Q7Z449 544 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 STK32AQ8WU08 396 aa6.27□□□□□ -1.41
SRP54-209ENST00000555746 ZNF594Q96JF6 807 aaPredicted RBP6.27□□□□□ -1.41
SRP54-209ENST00000555746 M0R2N6 131 aa6.26□□□□□ -1.41
SRP54-209ENST00000555746 TIMP2P16035 220 aa6.26□□□□□ -1.41
SRP54-209ENST00000555746 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
SRP54-209ENST00000555746 TPCN2Q8NHX9 752 aa6.26□□□□□ -1.41
SRP54-209ENST00000555746 ITPKCQ96DU7 683 aa6.26□□□□□ -1.41
SRP54-209ENST00000555746 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 ZIC2O95409 532 aaPredicted RBP6.25□□□□□ -1.41
SRP54-209ENST00000555746 GNRH1P01148 92 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 ADH1AP07327 375 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 SEC13P55735 322 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 WDR4P57081 412 aaKnown RBP6.25□□□□□ -1.41
SRP54-209ENST00000555746 SWI5Q1ZZU3 235 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 ESF1Q9H501 851 aaKnown RBP6.25□□□□□ -1.41
SRP54-209ENST00000555746 PDZRN3Q9UPQ7 1066 aa6.25□□□□□ -1.41
SRP54-209ENST00000555746 AVPP01185 164 aa6.24□□□□□ -1.41
SRP54-209ENST00000555746 SCNN1DP51172 638 aa6.24□□□□□ -1.41
SRP54-209ENST00000555746 PSME1Q06323 249 aa6.24□□□□□ -1.41
SRP54-209ENST00000555746 KDF1Q8NAX2 398 aaPredicted RBP6.24□□□□□ -1.41
SRP54-209ENST00000555746 HPS1Q92902 700 aa6.24□□□□□ -1.41
SRP54-209ENST00000555746 CLP1Q92989 425 aaKnown RBP6.24□□□□□ -1.41
SRP54-209ENST00000555746 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
SRP54-209ENST00000555746 RBM19Q9Y4C8 960 aaKnown RBP6.24□□□□□ -1.41
SRP54-209ENST00000555746 INHAP05111 366 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 GDF10P55107 478 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 CBLBQ13191 982 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 SLC4A9Q96Q91 983 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 ETNK1Q9HBU6 452 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 ZNF358Q9NW07 568 aa6.23□□□□□ -1.41
SRP54-209ENST00000555746 SFI1A8K8P3 1242 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 BACH1O14867 736 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 PTGIRP43119 386 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 ESCO1Q5FWF5 840 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRP54-209ENST00000555746 XAGE2Q96GT9 111 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 HRH3Q9Y5N1 445 aa6.22□□□□□ -1.41
SRP54-209ENST00000555746 CARNS1A5YM72 827 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 BRD1O95696 1058 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
SRP54-209ENST00000555746 EPHA4P54764 986 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 CLN3Q13286 438 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 KCTD17Q8N5Z5 321 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 SLAIN2Q9P270 581 aa6.21□□□□□ -1.42
SRP54-209ENST00000555746 NRG2O14511 850 aaPredicted RBP6.2□□□□□ -1.42
SRP54-209ENST00000555746 CAPN5O15484 640 aaPredicted RBP6.2□□□□□ -1.42
SRP54-209ENST00000555746 DGAT1O75907 488 aa6.2□□□□□ -1.42
SRP54-209ENST00000555746 STAU1O95793 577 aaKnown RBP6.2□□□□□ -1.42
SRP54-209ENST00000555746 IL2RAP01589 272 aa6.2□□□□□ -1.42
SRP54-209ENST00000555746 MTFR1Q15390 333 aa6.2□□□□□ -1.42
SRP54-209ENST00000555746 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
SRP54-209ENST00000555746 ESYT1Q9BSJ8 1104 aa6.2□□□□□ -1.42
SRP54-209ENST00000555746 ARHGEF10LQ9HCE6 1279 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms