RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CLK2P49760 499 aaKnown RBP9.35□□□□□ -0.91
SRP54-207ENST00000555535 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
SRP54-207ENST00000555535 ACDQ96AP0 544 aa9.35□□□□□ -0.91
SRP54-207ENST00000555535 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
SRP54-207ENST00000555535 GPC1P35052 558 aa9.34□□□□□ -0.91
SRP54-207ENST00000555535 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
SRP54-207ENST00000555535 DYRK1BQ9Y463 629 aa9.34□□□□□ -0.91
SRP54-207ENST00000555535 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
SRP54-207ENST00000555535 PRICKLE2Q7Z3G6 844 aa9.33□□□□□ -0.92
SRP54-207ENST00000555535 AK7Q96M32 723 aa9.33□□□□□ -0.92
SRP54-207ENST00000555535 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
SRP54-207ENST00000555535 OIP5O43482 229 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 LILRA1O75019 489 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 MX2P20592 715 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 MKL2Q9ULH7 1088 aa9.32□□□□□ -0.92
SRP54-207ENST00000555535 GPR25O00155 361 aa9.31□□□□□ -0.92
SRP54-207ENST00000555535 MAP2K3P46734 347 aa9.31□□□□□ -0.92
SRP54-207ENST00000555535 DBN1Q16643 649 aa9.31□□□□□ -0.92
SRP54-207ENST00000555535 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
SRP54-207ENST00000555535 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
SRP54-207ENST00000555535 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
SRP54-207ENST00000555535 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
SRP54-207ENST00000555535 KDF1Q8NAX2 398 aaPredicted RBP9.3□□□□□ -0.92
SRP54-207ENST00000555535 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
SRP54-207ENST00000555535 PIK3R2O00459 728 aa9.29□□□□□ -0.92
SRP54-207ENST00000555535 RHOQP17081 205 aa9.29□□□□□ -0.92
SRP54-207ENST00000555535 DZIP3Q86Y13 1208 aaKnown RBP9.29□□□□□ -0.92
SRP54-207ENST00000555535 RAB15P59190 212 aa9.28□□□□□ -0.92
SRP54-207ENST00000555535 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
SRP54-207ENST00000555535 OXCT2Q9BYC2 517 aaPredicted RBP9.28□□□□□ -0.92
SRP54-207ENST00000555535 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
SRP54-207ENST00000555535 ESPNB1AK53 854 aa9.27□□□□□ -0.93
SRP54-207ENST00000555535 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
SRP54-207ENST00000555535 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
SRP54-207ENST00000555535 WDR44Q5JSH3 913 aa9.26□□□□□ -0.93
SRP54-207ENST00000555535 LRRN4Q8WUT4 740 aa9.26□□□□□ -0.93
SRP54-207ENST00000555535 FURINP09958 794 aa9.25□□□□□ -0.93
SRP54-207ENST00000555535 NR6A1Q15406 480 aa9.25□□□□□ -0.93
SRP54-207ENST00000555535 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
SRP54-207ENST00000555535 GAS2L1Q99501 681 aaPredicted RBP9.24□□□□□ -0.93
SRP54-207ENST00000555535 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
SRP54-207ENST00000555535 SNRPNP63162 240 aaKnown RBP9.23□□□□□ -0.93
SRP54-207ENST00000555535 SLC27A3Q5K4L6 730 aa9.23□□□□□ -0.93
SRP54-207ENST00000555535 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
SRP54-207ENST00000555535 PHF24Q9UPV7 400 aa9.23□□□□□ -0.93
SRP54-207ENST00000555535 MEN1O00255 615 aa9.22□□□□□ -0.93
SRP54-207ENST00000555535 PDE4DQ08499 809 aa9.22□□□□□ -0.93
SRP54-207ENST00000555535 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
SRP54-207ENST00000555535 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
SRP54-207ENST00000555535 F11P03951 625 aa9.21□□□□□ -0.94
SRP54-207ENST00000555535 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
SRP54-207ENST00000555535 POU4F2Q12837 409 aa9.2□□□□□ -0.94
SRP54-207ENST00000555535 NBPF10Q6P3W6 841 aaKnown RBP9.2□□□□□ -0.94
SRP54-207ENST00000555535 NBPF15Q8N660 670 aa9.2□□□□□ -0.94
SRP54-207ENST00000555535 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
SRP54-207ENST00000555535 RRAGCQ9HB90 399 aa9.2□□□□□ -0.94
SRP54-207ENST00000555535 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
SRP54-207ENST00000555535 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
SRP54-207ENST00000555535 SPATA31C2B4DYI2 1134 aa9.19□□□□□ -0.94
SRP54-207ENST00000555535 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
SRP54-207ENST00000555535 COL8A1P27658 744 aa9.18□□□□□ -0.94
SRP54-207ENST00000555535 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
SRP54-207ENST00000555535 GRIP2Q9C0E4 1043 aa9.18□□□□□ -0.94
SRP54-207ENST00000555535 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
SRP54-207ENST00000555535 SHISA8B8ZZ34 492 aa9.17□□□□□ -0.94
SRP54-207ENST00000555535 GNB5O14775 395 aa9.16□□□□□ -0.94
SRP54-207ENST00000555535 CLN3Q13286 438 aa9.16□□□□□ -0.94
SRP54-207ENST00000555535 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
SRP54-207ENST00000555535 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
SRP54-207ENST00000555535 TAS1R3Q7RTX0 852 aa9.16□□□□□ -0.94
SRP54-207ENST00000555535 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
SRP54-207ENST00000555535 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
SRP54-207ENST00000555535 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.94
SRP54-207ENST00000555535 CYP2U1Q7Z449 544 aa9.15□□□□□ -0.94
SRP54-207ENST00000555535 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
SRP54-207ENST00000555535 AMPD1P23109 780 aa9.14□□□□□ -0.95
SRP54-207ENST00000555535 SKIV2LQ15477 1246 aaKnown RBP9.14□□□□□ -0.95
SRP54-207ENST00000555535 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
SRP54-207ENST00000555535 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
SRP54-207ENST00000555535 C1QTNF9BB2RNN3 333 aa9.13□□□□□ -0.95
SRP54-207ENST00000555535 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
SRP54-207ENST00000555535 AP1G2O75843 785 aa9.12□□□□□ -0.95
SRP54-207ENST00000555535 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
SRP54-207ENST00000555535 SLCO4C1Q6ZQN7 724 aa9.12□□□□□ -0.95
SRP54-207ENST00000555535 ZNF592Q92610 1267 aa9.11□□□□□ -0.95
SRP54-207ENST00000555535 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
SRP54-207ENST00000555535 A0A1B0GTH6 734 aa9.1□□□□□ -0.95
SRP54-207ENST00000555535 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
SRP54-207ENST00000555535 CD163Q86VB7 1156 aa9.1□□□□□ -0.95
SRP54-207ENST00000555535 ATXN7L1Q9ULK2 861 aaPredicted RBP9.1□□□□□ -0.95
SRP54-207ENST00000555535 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
SRP54-207ENST00000555535 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
SRP54-207ENST00000555535 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
SRP54-207ENST00000555535 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
SRP54-207ENST00000555535 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
SRP54-207ENST00000555535 BMP4P12644 408 aa9.08□□□□□ -0.96
SRP54-207ENST00000555535 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms