RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
HNRNPC-219ENST00000555309 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-219ENST00000555309 EYA1Q99502 592 aa13.73□□□□□ -0.21
HNRNPC-219ENST00000555309 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-219ENST00000555309 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 CENPBP07199 599 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 EIF4A2Q14240 407 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-219ENST00000555309 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-219ENST00000555309 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.22
HNRNPC-219ENST00000555309 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-219ENST00000555309 KCNQ4P56696 695 aa13.7□□□□□ -0.22
HNRNPC-219ENST00000555309 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-219ENST00000555309 NHSQ6T4R5 1651 aa13.7□□□□□ -0.22
HNRNPC-219ENST00000555309 CYP27B1O15528 508 aa13.69□□□□□ -0.22
HNRNPC-219ENST00000555309 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-219ENST00000555309 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
HNRNPC-219ENST00000555309 BTAF1O14981 1849 aa13.68□□□□□ -0.22
HNRNPC-219ENST00000555309 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
HNRNPC-219ENST00000555309 NSD2O96028 1365 aa13.68□□□□□ -0.22
HNRNPC-219ENST00000555309 DOT1LQ8TEK3 1739 aa13.66□□□□□ -0.22
HNRNPC-219ENST00000555309 NCAPD2Q15021 1401 aa13.66□□□□□ -0.22
HNRNPC-219ENST00000555309 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
HNRNPC-219ENST00000555309 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-219ENST00000555309 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
HNRNPC-219ENST00000555309 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-219ENST00000555309 ZNF827Q17R98 1081 aa13.64□□□□□ -0.23
HNRNPC-219ENST00000555309 MTHFSP49914 203 aa13.64□□□□□ -0.23
HNRNPC-219ENST00000555309 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
HNRNPC-219ENST00000555309 PCDH11XQ9BZA7 1347 aa13.63□□□□□ -0.23
HNRNPC-219ENST00000555309 PCDH11YQ9BZA8 1340 aa13.63□□□□□ -0.23
HNRNPC-219ENST00000555309 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
HNRNPC-219ENST00000555309 IL13P35225 146 aa13.62□□□□□ -0.23
HNRNPC-219ENST00000555309 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
HNRNPC-219ENST00000555309 LRP5O75197 1615 aa13.62□□□□□ -0.23
HNRNPC-219ENST00000555309 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
HNRNPC-219ENST00000555309 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
HNRNPC-219ENST00000555309 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
HNRNPC-219ENST00000555309 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
HNRNPC-219ENST00000555309 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
HNRNPC-219ENST00000555309 PHKG2P15735 406 aa13.6□□□□□ -0.23
HNRNPC-219ENST00000555309 SULT6B1Q6IMI4 303 aa13.6□□□□□ -0.23
HNRNPC-219ENST00000555309 PIGBQ92521 554 aa13.6□□□□□ -0.23
HNRNPC-219ENST00000555309 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
HNRNPC-219ENST00000555309 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-219ENST00000555309 PAPPAQ13219 1627 aa13.59□□□□□ -0.23
HNRNPC-219ENST00000555309 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-219ENST00000555309 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
HNRNPC-219ENST00000555309 CASZ1Q86V15 1759 aa13.58□□□□□ -0.24
HNRNPC-219ENST00000555309 HMOX1P09601 288 aa13.58□□□□□ -0.24
HNRNPC-219ENST00000555309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.244e-12■■■□□ 16.5
HNRNPC-219ENST00000555309 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-219ENST00000555309 ANP32CO43423 234 aa13.57□□□□□ -0.24
HNRNPC-219ENST00000555309 ITGB4P16144 1822 aa13.57□□□□□ -0.24
HNRNPC-219ENST00000555309 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
HNRNPC-219ENST00000555309 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
HNRNPC-219ENST00000555309 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
HNRNPC-219ENST00000555309 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
HNRNPC-219ENST00000555309 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
HNRNPC-219ENST00000555309 LY75O60449 1722 aa13.56□□□□□ -0.24
HNRNPC-219ENST00000555309 PTGER2P43116 358 aa13.56□□□□□ -0.24
HNRNPC-219ENST00000555309 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-219ENST00000555309 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
HNRNPC-219ENST00000555309 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
HNRNPC-219ENST00000555309 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
HNRNPC-219ENST00000555309 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
HNRNPC-219ENST00000555309 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-219ENST00000555309 KDRP35968 1356 aa13.54□□□□□ -0.24
HNRNPC-219ENST00000555309 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 KDM6AO15550 1401 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 UTRNP46939 3433 aa13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 COL3A1P02461 1466 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-219ENST00000555309 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
HNRNPC-219ENST00000555309 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-219ENST00000555309 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 ITPK1Q13572 414 aa13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 SLC4A9Q96Q91 983 aa13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
HNRNPC-219ENST00000555309 U2SURPO15042 1029 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 MTHFSDQ2M296 383 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 SIK1P57059 783 aa13.5□□□□□ -0.25
HNRNPC-219ENST00000555309 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms