RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SCTRP47872 440 aa8.08□□□□□ -1.12
SCFD1-214ENST00000554819 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
SCFD1-214ENST00000554819 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
SCFD1-214ENST00000554819 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-214ENST00000554819 BMP2P12643 396 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 BMP1P13497 986 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 TRIM46Q7Z4K8 759 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 KIFC2Q96AC6 838 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 NOD1Q9Y239 953 aa8.07□□□□□ -1.12
SCFD1-214ENST00000554819 PTGIRP43119 386 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 RELBQ01201 579 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 NCOA4Q13772 614 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
SCFD1-214ENST00000554819 SERPINA10Q9UK55 444 aa8.06□□□□□ -1.12
SCFD1-214ENST00000554819 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 ARID3CA6NKF2 412 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 GNRH1P01148 92 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
SCFD1-214ENST00000554819 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-214ENST00000554819 SPINT1O43278 529 aa8.04□□□□□ -1.12
SCFD1-214ENST00000554819 TRIM50Q86XT4 487 aa8.04□□□□□ -1.12
SCFD1-214ENST00000554819 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
SCFD1-214ENST00000554819 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-214ENST00000554819 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
SCFD1-214ENST00000554819 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-214ENST00000554819 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-214ENST00000554819 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
SCFD1-214ENST00000554819 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
SCFD1-214ENST00000554819 KDF1Q8NAX2 398 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-214ENST00000554819 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
SCFD1-214ENST00000554819 A0A1W2PRU2 124 aa8.02□□□□□ -1.13
SCFD1-214ENST00000554819 C11orf95C9JLR9 678 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-214ENST00000554819 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
SCFD1-214ENST00000554819 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
SCFD1-214ENST00000554819 MKRN1Q9UHC7 482 aaKnown RBP8.02□□□□□ -1.13
SCFD1-214ENST00000554819 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
SCFD1-214ENST00000554819 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-214ENST00000554819 TTLL8A6PVC2 850 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 MEN1O00255 615 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 GTF2IP78347 998 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 CLN3Q13286 438 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 CFAP70Q5T0N1 1121 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 INSM2Q96T92 566 aaPredicted RBP8□□□□□ -1.13
SCFD1-214ENST00000554819 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
SCFD1-214ENST00000554819 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
SCFD1-214ENST00000554819 GPC1P35052 558 aa7.99□□□□□ -1.13
SCFD1-214ENST00000554819 RNF144AP50876 292 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-214ENST00000554819 PSME1Q06323 249 aa7.99□□□□□ -1.13
SCFD1-214ENST00000554819 ESYT1Q9BSJ8 1104 aa7.99□□□□□ -1.13
SCFD1-214ENST00000554819 SUPT5HO00267 1087 aaKnown RBP7.98□□□□□ -1.13
SCFD1-214ENST00000554819 MAN1A2O60476 641 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 RFX1P22670 979 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-214ENST00000554819 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
SCFD1-214ENST00000554819 LARGE2Q8N3Y3 721 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 OGFOD1Q8N543 542 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 CNKSR1Q969H4 720 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 XAGE2Q96GT9 111 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
SCFD1-214ENST00000554819 DNAAF2Q9NVR5 837 aaKnown RBP7.98□□□□□ -1.13
SCFD1-214ENST00000554819 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
SCFD1-214ENST00000554819 POTECB2RU33 542 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-214ENST00000554819 BACH1O14867 736 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 INHAP05111 366 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 RASA1P20936 1047 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 GDF10P55107 478 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.135e-6■□□□□ 9.7
SCFD1-214ENST00000554819 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-214ENST00000554819 CCDC82Q8N4S0 544 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 C1orf115Q9H7X2 142 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 ETNK1Q9HBU6 452 aa7.97□□□□□ -1.13
SCFD1-214ENST00000554819 IL2RAP01589 272 aa7.96□□□□□ -1.14
SCFD1-214ENST00000554819 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
SCFD1-214ENST00000554819 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-214ENST00000554819 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
SCFD1-214ENST00000554819 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-214ENST00000554819 SCNN1DP51172 638 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 CLDN10P78369 228 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 CENPCQ03188 943 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 RNF217Q8TC41 542 aa7.95□□□□□ -1.14
SCFD1-214ENST00000554819 FAM196BA6NMK8 535 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-214ENST00000554819 LYSMD3Q7Z3D4 306 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 SIX5Q8N196 739 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
SCFD1-214ENST00000554819 HRH3Q9Y5N1 445 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms