RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 USP4Q13107 963 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 NCOA4Q13772 614 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 USP17L2Q6R6M4 530 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 USP17L1Q7RTZ2 530 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
KTN1-210ENST00000553624 ADH1AP07327 375 aa8.37□□□□□ -1.07
KTN1-210ENST00000553624 Q6ZVU0 165 aa8.37□□□□□ -1.07
KTN1-210ENST00000553624 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
KTN1-210ENST00000553624 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
KTN1-210ENST00000553624 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
KTN1-210ENST00000553624 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
KTN1-210ENST00000553624 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
KTN1-210ENST00000553624 SCARF1Q14162 830 aa8.36□□□□□ -1.07
KTN1-210ENST00000553624 MRPL14Q6P1L8 145 aaKnown RBP8.36□□□□□ -1.07
KTN1-210ENST00000553624 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
KTN1-210ENST00000553624 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
KTN1-210ENST00000553624 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
KTN1-210ENST00000553624 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
KTN1-210ENST00000553624 MAFBQ9Y5Q3 323 aaPredicted RBP8.36□□□□□ -1.07
KTN1-210ENST00000553624 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 ADD1P35611 737 aaKnown RBP8.35□□□□□ -1.07
KTN1-210ENST00000553624 RELBQ01201 579 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 OSBPL3Q9H4L5 887 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 NOD1Q9Y239 953 aa8.35□□□□□ -1.07
KTN1-210ENST00000553624 BMP2P12643 396 aa8.34□□□□□ -1.07
KTN1-210ENST00000553624 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
KTN1-210ENST00000553624 TRIM46Q7Z4K8 759 aa8.34□□□□□ -1.07
KTN1-210ENST00000553624 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
KTN1-210ENST00000553624 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
KTN1-210ENST00000553624 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
KTN1-210ENST00000553624 GTF2IP78347 998 aa8.32□□□□□ -1.08
KTN1-210ENST00000553624 PSME1Q06323 249 aa8.32□□□□□ -1.08
KTN1-210ENST00000553624 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
KTN1-210ENST00000553624 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
KTN1-210ENST00000553624 RFX1P22670 979 aa8.31□□□□□ -1.08
KTN1-210ENST00000553624 PTGIRP43119 386 aa8.31□□□□□ -1.08
KTN1-210ENST00000553624 ZFP42Q96MM3 310 aa8.31□□□□□ -1.08
KTN1-210ENST00000553624 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
KTN1-210ENST00000553624 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
KTN1-210ENST00000553624 WFS1O76024 890 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 GNRH1P01148 92 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 ATP1A2P50993 1020 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 HOMEZQ8IX15 550 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
KTN1-210ENST00000553624 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
KTN1-210ENST00000553624 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
KTN1-210ENST00000553624 MEN1O00255 615 aa8.29□□□□□ -1.08
KTN1-210ENST00000553624 SPINT1O43278 529 aa8.29□□□□□ -1.08
KTN1-210ENST00000553624 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
KTN1-210ENST00000553624 KDF1Q8NAX2 398 aaPredicted RBP8.29□□□□□ -1.08
KTN1-210ENST00000553624 A0A1W2PRU2 124 aa8.28□□□□□ -1.08
KTN1-210ENST00000553624 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
KTN1-210ENST00000553624 NLRP3Q96P20 1036 aa8.28□□□□□ -1.08
KTN1-210ENST00000553624 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
KTN1-210ENST00000553624 ARID3AQ99856 593 aa8.28□□□□□ -1.08
KTN1-210ENST00000553624 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
KTN1-210ENST00000553624 DNAAF2Q9NVR5 837 aaKnown RBP8.28□□□□□ -1.08
KTN1-210ENST00000553624 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
KTN1-210ENST00000553624 RASA1P20936 1047 aa8.27□□□□□ -1.09
KTN1-210ENST00000553624 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
KTN1-210ENST00000553624 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
KTN1-210ENST00000553624 OGFOD1Q8N543 542 aa8.27□□□□□ -1.09
KTN1-210ENST00000553624 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.09
KTN1-210ENST00000553624 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
KTN1-210ENST00000553624 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 STAU1O95793 577 aaKnown RBP8.26□□□□□ -1.09
KTN1-210ENST00000553624 GDF10P55107 478 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 CLDN10P78369 228 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 CLN3Q13286 438 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 KANK4Q5T7N3 995 aaPredicted RBP8.26□□□□□ -1.09
KTN1-210ENST00000553624 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 ETNK1Q9HBU6 452 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
KTN1-210ENST00000553624 PCDHGA11Q9Y5H2 935 aa8.26□□□□□ -1.09
KTN1-210ENST00000553624 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.25□□□□□ -1.09
KTN1-210ENST00000553624 CTSOP43234 321 aaPredicted RBP8.25□□□□□ -1.09
KTN1-210ENST00000553624 SCNN1DP51172 638 aa8.25□□□□□ -1.09
KTN1-210ENST00000553624 CNKSR1Q969H4 720 aa8.25□□□□□ -1.09
KTN1-210ENST00000553624 KIAA1024Q9UPX6 916 aa8.25□□□□□ -1.09
KTN1-210ENST00000553624 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L21D6R901 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 MAN1A2O60476 641 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 IL2RAP01589 272 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
KTN1-210ENST00000553624 CDCA8Q53HL2 280 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms