RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CRB1P82279 1406 aa11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 NGEFQ8N5V2 710 aa11.42□□□□□ -0.58
AC055716.2-201ENST00000552545 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
AC055716.2-201ENST00000552545 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
AC055716.2-201ENST00000552545 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
AC055716.2-201ENST00000552545 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 USP21Q9UK80 565 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 NWD2Q9ULI1 1742 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 MCM10Q7L590 875 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 UNC5CLQ8IV45 518 aa11.41□□□□□ -0.58
AC055716.2-201ENST00000552545 IL2RBP14784 551 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 C1orf141Q5JVX7 400 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 MEGF6O75095 1541 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 NRAPQ86VF7 1730 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 PDE3BQ13370 1112 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 CCDC27Q2M243 656 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 SLIT2O94813 1529 aa11.4□□□□□ -0.58
AC055716.2-201ENST00000552545 AFF2P51816 1311 aa11.39□□□□□ -0.59
AC055716.2-201ENST00000552545 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
AC055716.2-201ENST00000552545 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
AC055716.2-201ENST00000552545 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
AC055716.2-201ENST00000552545 PARP4Q9UKK3 1724 aaKnown RBP11.39□□□□□ -0.59
AC055716.2-201ENST00000552545 A0A0G2JS52 829 aa11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 MAP3K5Q99683 1374 aa11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 MPRIPQ6WCQ1 1025 aa11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
AC055716.2-201ENST00000552545 SLFN5Q08AF3 891 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 AKAP4Q5JQC9 854 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 BCL9LQ86UU0 1499 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 SPATA31A5Q5VU36 1347 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 SPATA31A7Q8IWB4 1347 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 E9PSI1 815 aa11.37□□□□□ -0.59
AC055716.2-201ENST00000552545 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 TSR2Q969E8 191 aaKnown RBP11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 LGR6Q9HBX8 967 aa11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 VPS72Q15906 364 aa11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 IFNL2Q8IZJ0 200 aa11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 OVOS2A0A0G2JMS6 1433 aa11.36□□□□□ -0.59
AC055716.2-201ENST00000552545 EXOC5O00471 708 aa11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 HTATSF1O43719 755 aaKnown RBP11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 PHKG2P15735 406 aa11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 THRAP3Q9Y2W1 955 aaKnown RBP11.35□□□□□ -0.59
AC055716.2-201ENST00000552545 PKD1L3Q7Z443 1732 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 CYP27B1O15528 508 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 GNAI1P63096 354 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 QTRT2Q9H974 415 aaKnown RBP11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 RNMTO43148 476 aaKnown RBP11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 TEFQ10587 303 aa11.34□□□□□ -0.59
AC055716.2-201ENST00000552545 DDB1Q16531 1140 aa11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 IL16Q14005 1332 aa11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
AC055716.2-201ENST00000552545 FANCIQ9NVI1 1328 aa11.32□□□□□ -0.6
AC055716.2-201ENST00000552545 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
AC055716.2-201ENST00000552545 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
AC055716.2-201ENST00000552545 TSPYL4Q9UJ04 414 aa11.32□□□□□ -0.6
AC055716.2-201ENST00000552545 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 SHANK3Q9BYB0 1731 aa11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 TAF7Q15545 349 aaPredicted RBP11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 SCN11AQ9UI33 1791 aa11.31□□□□□ -0.6
AC055716.2-201ENST00000552545 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
AC055716.2-201ENST00000552545 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
AC055716.2-201ENST00000552545 CABP4P57796 275 aa11.3□□□□□ -0.6
AC055716.2-201ENST00000552545 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
AC055716.2-201ENST00000552545 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 CHL1O00533 1208 aa11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms