RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
NPAS3-209ENST00000551008 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
NPAS3-209ENST00000551008 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
NPAS3-209ENST00000551008 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
NPAS3-209ENST00000551008 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
NPAS3-209ENST00000551008 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
NPAS3-209ENST00000551008 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
NPAS3-209ENST00000551008 LY75O60449 1722 aa18.05■□□□□ 0.48
NPAS3-209ENST00000551008 NSD2O96028 1365 aa18.04■□□□□ 0.48
NPAS3-209ENST00000551008 PANK3Q9H999 370 aa18.04■□□□□ 0.48
NPAS3-209ENST00000551008 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
NPAS3-209ENST00000551008 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
NPAS3-209ENST00000551008 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
NPAS3-209ENST00000551008 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
NPAS3-209ENST00000551008 ITGB4P16144 1822 aa18.02■□□□□ 0.47
NPAS3-209ENST00000551008 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
NPAS3-209ENST00000551008 DDX54Q8TDD1 881 aaKnown RBP18.01■□□□□ 0.47
NPAS3-209ENST00000551008 WASHC2AQ641Q2 1341 aa18■□□□□ 0.47
NPAS3-209ENST00000551008 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
NPAS3-209ENST00000551008 PDGFDQ9GZP0 370 aaPredicted RBP18■□□□□ 0.47
NPAS3-209ENST00000551008 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
NPAS3-209ENST00000551008 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
NPAS3-209ENST00000551008 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
NPAS3-209ENST00000551008 TNNT2P45379 298 aaPredicted RBP17.96■□□□□ 0.47
NPAS3-209ENST00000551008 EYA1Q99502 592 aa17.96■□□□□ 0.47
NPAS3-209ENST00000551008 LRRC4BQ9NT99 713 aa17.96■□□□□ 0.47
NPAS3-209ENST00000551008 CYP27B1O15528 508 aa17.95■□□□□ 0.46
NPAS3-209ENST00000551008 PRIM1P49642 420 aaKnown RBP17.95■□□□□ 0.46
NPAS3-209ENST00000551008 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
NPAS3-209ENST00000551008 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
NPAS3-209ENST00000551008 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
NPAS3-209ENST00000551008 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
NPAS3-209ENST00000551008 EIF4A2Q14240 407 aaKnown RBP17.94■□□□□ 0.46
NPAS3-209ENST00000551008 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
NPAS3-209ENST00000551008 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
NPAS3-209ENST00000551008 SLC15A2Q16348 729 aa17.92■□□□□ 0.46
NPAS3-209ENST00000551008 ZNF827Q17R98 1081 aa17.92■□□□□ 0.46
NPAS3-209ENST00000551008 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
NPAS3-209ENST00000551008 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
NPAS3-209ENST00000551008 C5P01031 1676 aa17.9■□□□□ 0.46
NPAS3-209ENST00000551008 KCNQ4P56696 695 aa17.9■□□□□ 0.46
NPAS3-209ENST00000551008 IGSF1Q8N6C5 1336 aa17.9■□□□□ 0.46
NPAS3-209ENST00000551008 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
NPAS3-209ENST00000551008 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
NPAS3-209ENST00000551008 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
NPAS3-209ENST00000551008 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
NPAS3-209ENST00000551008 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
NPAS3-209ENST00000551008 PTGER2P43116 358 aa17.86■□□□□ 0.45
NPAS3-209ENST00000551008 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
NPAS3-209ENST00000551008 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
NPAS3-209ENST00000551008 ZBTB7AO95365 584 aa17.85■□□□□ 0.45
NPAS3-209ENST00000551008 SLC27A3Q5K4L6 730 aa17.85■□□□□ 0.45
NPAS3-209ENST00000551008 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
NPAS3-209ENST00000551008 SGIP1Q9BQI5 828 aa17.85■□□□□ 0.45
NPAS3-209ENST00000551008 PLEKHG2Q9H7P9 1386 aa17.85■□□□□ 0.45
NPAS3-209ENST00000551008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.85■□□□□ 0.45
NPAS3-209ENST00000551008 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
NPAS3-209ENST00000551008 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
NPAS3-209ENST00000551008 PHKG2P15735 406 aa17.83■□□□□ 0.44
NPAS3-209ENST00000551008 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.44
NPAS3-209ENST00000551008 KDRP35968 1356 aa17.82■□□□□ 0.44
NPAS3-209ENST00000551008 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
NPAS3-209ENST00000551008 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
NPAS3-209ENST00000551008 IL13P35225 146 aa17.82■□□□□ 0.44
NPAS3-209ENST00000551008 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
NPAS3-209ENST00000551008 C4BP0C0L5 1744 aa17.81■□□□□ 0.44
NPAS3-209ENST00000551008 PALLDQ8WX93 1383 aa17.81■□□□□ 0.44
NPAS3-209ENST00000551008 PIGBQ92521 554 aa17.81■□□□□ 0.44
NPAS3-209ENST00000551008 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
NPAS3-209ENST00000551008 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
NPAS3-209ENST00000551008 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
NPAS3-209ENST00000551008 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
NPAS3-209ENST00000551008 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
NPAS3-209ENST00000551008 CC2D1BQ5T0F9 858 aaKnown RBP17.79■□□□□ 0.44
NPAS3-209ENST00000551008 MTHFSP49914 203 aa17.78■□□□□ 0.44
NPAS3-209ENST00000551008 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
NPAS3-209ENST00000551008 ZNF831Q5JPB2 1677 aa17.77■□□□□ 0.44
NPAS3-209ENST00000551008 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
NPAS3-209ENST00000551008 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
NPAS3-209ENST00000551008 COL5A3P25940 1745 aaPredicted RBP17.77■□□□□ 0.44
NPAS3-209ENST00000551008 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
NPAS3-209ENST00000551008 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
NPAS3-209ENST00000551008 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
NPAS3-209ENST00000551008 PPP1R1BQ9UD71 204 aaPredicted RBP17.74■□□□□ 0.43
NPAS3-209ENST00000551008 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
NPAS3-209ENST00000551008 ZNF530Q6P9A1 599 aaPredicted RBP17.73■□□□□ 0.43
NPAS3-209ENST00000551008 COL23A1Q86Y22 540 aaPredicted RBP17.73■□□□□ 0.43
NPAS3-209ENST00000551008 TFCP2L1Q9NZI6 479 aa17.73■□□□□ 0.43
NPAS3-209ENST00000551008 CICQ96RK0 1608 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-209ENST00000551008 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
NPAS3-209ENST00000551008 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
NPAS3-209ENST00000551008 TJP1Q07157 1748 aa17.72■□□□□ 0.43
NPAS3-209ENST00000551008 ITPK1Q13572 414 aa17.71■□□□□ 0.43
NPAS3-209ENST00000551008 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-209ENST00000551008 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
NPAS3-209ENST00000551008 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-209ENST00000551008 SLC4A9Q96Q91 983 aa17.71■□□□□ 0.43
NPAS3-209ENST00000551008 MRC1P22897 1456 aa17.7■□□□□ 0.42
NPAS3-209ENST00000551008 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
NPAS3-209ENST00000551008 SIK1P57059 783 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms