RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 TNS2Q63HR2 1409 aa11.47□□□□□ -0.57
ATXN2-220ENST00000550236 KIF7Q2M1P5 1343 aa11.47□□□□□ -0.57
ATXN2-220ENST00000550236 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
ATXN2-220ENST00000550236 POLKQ9UBT6 870 aa11.46□□□□□ -0.57
ATXN2-220ENST00000550236 BTAF1O14981 1849 aa11.46□□□□□ -0.58
ATXN2-220ENST00000550236 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.58
ATXN2-220ENST00000550236 MEGF6O75095 1541 aa11.45□□□□□ -0.58
ATXN2-220ENST00000550236 SMG6Q86US8 1419 aaKnown RBP11.45□□□□□ -0.58
ATXN2-220ENST00000550236 INSRP06213 1382 aa11.45□□□□□ -0.58
ATXN2-220ENST00000550236 FLT4P35916 1363 aa11.45□□□□□ -0.58
ATXN2-220ENST00000550236 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
ATXN2-220ENST00000550236 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
ATXN2-220ENST00000550236 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
ATXN2-220ENST00000550236 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
ATXN2-220ENST00000550236 RTL1A6NKG5 1358 aa11.44□□□□□ -0.58
ATXN2-220ENST00000550236 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
ATXN2-220ENST00000550236 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
ATXN2-220ENST00000550236 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
ATXN2-220ENST00000550236 RAPGEF4Q8WZA2 1011 aa11.44□□□□□ -0.58
ATXN2-220ENST00000550236 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
ATXN2-220ENST00000550236 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
ATXN2-220ENST00000550236 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
ATXN2-220ENST00000550236 PROM2Q8N271 834 aa11.43□□□□□ -0.58
ATXN2-220ENST00000550236 KCNQ4P56696 695 aa11.42□□□□□ -0.58
ATXN2-220ENST00000550236 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
ATXN2-220ENST00000550236 EYA1Q99502 592 aa11.42□□□□□ -0.58
ATXN2-220ENST00000550236 WASHC2AQ641Q2 1341 aa11.41□□□□□ -0.58
ATXN2-220ENST00000550236 PLSCR1O15162 318 aa11.41□□□□□ -0.58
ATXN2-220ENST00000550236 EIF4A2Q14240 407 aaKnown RBP11.41□□□□□ -0.58
ATXN2-220ENST00000550236 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
ATXN2-220ENST00000550236 PDGFDQ9GZP0 370 aaPredicted RBP11.4□□□□□ -0.58
ATXN2-220ENST00000550236 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.59
ATXN2-220ENST00000550236 ITGB4P16144 1822 aa11.39□□□□□ -0.59
ATXN2-220ENST00000550236 RGPD3A6NKT7 1758 aaPredicted RBP11.39□□□□□ -0.59
ATXN2-220ENST00000550236 RGPD4Q7Z3J3 1758 aa11.39□□□□□ -0.59
ATXN2-220ENST00000550236 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
ATXN2-220ENST00000550236 BCL9O00512 1426 aa11.38□□□□□ -0.59
ATXN2-220ENST00000550236 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
ATXN2-220ENST00000550236 CYP27B1O15528 508 aa11.37□□□□□ -0.59
ATXN2-220ENST00000550236 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
ATXN2-220ENST00000550236 LRRC4BQ9NT99 713 aa11.37□□□□□ -0.59
ATXN2-220ENST00000550236 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
ATXN2-220ENST00000550236 MTHFSP49914 203 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 STK32BQ9NY57 414 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 NSD2O96028 1365 aa11.36□□□□□ -0.59
ATXN2-220ENST00000550236 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
ATXN2-220ENST00000550236 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
ATXN2-220ENST00000550236 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
ATXN2-220ENST00000550236 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
ATXN2-220ENST00000550236 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
ATXN2-220ENST00000550236 LRP5O75197 1615 aa11.35□□□□□ -0.59
ATXN2-220ENST00000550236 SLC15A2Q16348 729 aa11.34□□□□□ -0.59
ATXN2-220ENST00000550236 LY75O60449 1722 aa11.34□□□□□ -0.59
ATXN2-220ENST00000550236 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
ATXN2-220ENST00000550236 HMOX1P09601 288 aa11.33□□□□□ -0.6
ATXN2-220ENST00000550236 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
ATXN2-220ENST00000550236 SULT6B1Q6IMI4 303 aa11.33□□□□□ -0.6
ATXN2-220ENST00000550236 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
ATXN2-220ENST00000550236 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
ATXN2-220ENST00000550236 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
ATXN2-220ENST00000550236 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
ATXN2-220ENST00000550236 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
ATXN2-220ENST00000550236 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
ATXN2-220ENST00000550236 PHKG2P15735 406 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 IL13P35225 146 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 IFNL2Q8IZJ0 200 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 PIGBQ92521 554 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 NCAPD2Q15021 1401 aa11.31□□□□□ -0.6
ATXN2-220ENST00000550236 VIRMAQ69YN4 1812 aaKnown RBP11.3□□□□□ -0.6
ATXN2-220ENST00000550236 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
ATXN2-220ENST00000550236 ZNF530Q6P9A1 599 aaPredicted RBP11.3□□□□□ -0.6
ATXN2-220ENST00000550236 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
ATXN2-220ENST00000550236 PAPPAQ13219 1627 aa11.3□□□□□ -0.6
ATXN2-220ENST00000550236 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
ATXN2-220ENST00000550236 U2SURPO15042 1029 aaKnown RBP11.29□□□□□ -0.6
ATXN2-220ENST00000550236 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 TMOD3Q9NYL9 352 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 TFCP2L1Q9NZI6 479 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 C5P01031 1676 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
ATXN2-220ENST00000550236 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
ATXN2-220ENST00000550236 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
ATXN2-220ENST00000550236 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-220ENST00000550236 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
ATXN2-220ENST00000550236 C1orf141Q5JVX7 400 aa11.27□□□□□ -0.61
ATXN2-220ENST00000550236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.612e-7■■■□□ 16.9
ATXN2-220ENST00000550236 KLHL34Q8N239 644 aa11.26□□□□□ -0.61
ATXN2-220ENST00000550236 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
ATXN2-220ENST00000550236 ATG3Q9NT62 314 aa11.26□□□□□ -0.61
ATXN2-220ENST00000550236 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
ATXN2-220ENST00000550236 PHF14O94880 888 aa11.25□□□□□ -0.61
ATXN2-220ENST00000550236 PTGER2P43116 358 aa11.25□□□□□ -0.61
ATXN2-220ENST00000550236 CABP4P57796 275 aa11.25□□□□□ -0.61
ATXN2-220ENST00000550236 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
ATXN2-220ENST00000550236 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms