RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 PLEKHG3A1L390 1219 aa15.87■□□□□ 0.13
TROAP-210ENST00000549534 WBP1LQ9NX94 342 aa15.87■□□□□ 0.13
TROAP-210ENST00000549534 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
TROAP-210ENST00000549534 TGFB2P61812 414 aa15.86■□□□□ 0.13
TROAP-210ENST00000549534 VEGFAP15692 232 aaPredicted RBP15.85■□□□□ 0.13
TROAP-210ENST00000549534 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
TROAP-210ENST00000549534 COL18A1P39060 1754 aa15.85■□□□□ 0.13
TROAP-210ENST00000549534 PRPF38BQ5VTL8 546 aaKnown RBP15.84■□□□□ 0.13
TROAP-210ENST00000549534 CNTNAP1P78357 1384 aa15.84■□□□□ 0.13
TROAP-210ENST00000549534 PDE4DIPQ5VU43 2346 aa15.84■□□□□ 0.13
TROAP-210ENST00000549534 SLIT3O75094 1523 aa15.84■□□□□ 0.13
TROAP-210ENST00000549534 HSPA8P11142 646 aaKnown RBP15.83■□□□□ 0.12
TROAP-210ENST00000549534 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
TROAP-210ENST00000549534 IL2RBP14784 551 aa15.82■□□□□ 0.12
TROAP-210ENST00000549534 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
TROAP-210ENST00000549534 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
TROAP-210ENST00000549534 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
TROAP-210ENST00000549534 LY75O60449 1722 aa15.8■□□□□ 0.12
TROAP-210ENST00000549534 FCHSD2O94868 740 aa15.8■□□□□ 0.12
TROAP-210ENST00000549534 NLRP6P59044 892 aa15.8■□□□□ 0.12
TROAP-210ENST00000549534 RNF181Q9P0P0 153 aa15.8■□□□□ 0.12
TROAP-210ENST00000549534 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
TROAP-210ENST00000549534 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
TROAP-210ENST00000549534 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
TROAP-210ENST00000549534 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.12
TROAP-210ENST00000549534 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
TROAP-210ENST00000549534 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
TROAP-210ENST00000549534 TNRC18O15417 2968 aaPredicted RBP15.76■□□□□ 0.11
TROAP-210ENST00000549534 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
TROAP-210ENST00000549534 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
TROAP-210ENST00000549534 GLTPD2A6NH11 291 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 VEGFBP49765 207 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 ADGRB1O14514 1584 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 USP47Q96K76 1375 aa15.75■□□□□ 0.11
TROAP-210ENST00000549534 A0A0G2JLW4 131 aa15.74■□□□□ 0.11
TROAP-210ENST00000549534 NSD2O96028 1365 aa15.74■□□□□ 0.11
TROAP-210ENST00000549534 USP54Q70EL1 1684 aa15.73■□□□□ 0.11
TROAP-210ENST00000549534 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
TROAP-210ENST00000549534 GCC1Q96CN9 775 aa15.73■□□□□ 0.11
TROAP-210ENST00000549534 ITGAEP38570 1179 aa15.72■□□□□ 0.11
TROAP-210ENST00000549534 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
TROAP-210ENST00000549534 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
TROAP-210ENST00000549534 ERBB3P21860 1342 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 DPEP1P16444 411 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 DDX54Q8TDD1 881 aaKnown RBP15.7■□□□□ 0.1
TROAP-210ENST00000549534 AK7Q96M32 723 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 KIAA1551Q9HCM1 1747 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
TROAP-210ENST00000549534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
TROAP-210ENST00000549534 SSFA2P28290 1259 aa15.68■□□□□ 0.1
TROAP-210ENST00000549534 MMP10P09238 476 aa15.67■□□□□ 0.1
TROAP-210ENST00000549534 PIM2Q9P1W9 311 aa15.67■□□□□ 0.1
TROAP-210ENST00000549534 C5P01031 1676 aa15.67■□□□□ 0.1
TROAP-210ENST00000549534 DALRD3Q5D0E6 543 aaKnown RBP15.66■□□□□ 0.1
TROAP-210ENST00000549534 MCOLN1Q9GZU1 580 aa15.66■□□□□ 0.1
TROAP-210ENST00000549534 TMEM88BA6NKF7 163 aa15.65■□□□□ 0.1
TROAP-210ENST00000549534 CCDC87Q9NVE4 849 aa15.65■□□□□ 0.1
TROAP-210ENST00000549534 ARFGEF1Q9Y6D6 1849 aa15.65■□□□□ 0.1
TROAP-210ENST00000549534 RGPD5Q99666 1765 aa15.64■□□□□ 0.1
TROAP-210ENST00000549534 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
TROAP-210ENST00000549534 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
TROAP-210ENST00000549534 PHF14O94880 888 aa15.64■□□□□ 0.09
TROAP-210ENST00000549534 KCNA3P22001 575 aa15.64■□□□□ 0.09
TROAP-210ENST00000549534 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
TROAP-210ENST00000549534 N4BP2Q86UW6 1770 aaPredicted RBP15.64■□□□□ 0.09
TROAP-210ENST00000549534 PASKQ96RG2 1323 aa15.64■□□□□ 0.09
TROAP-210ENST00000549534 RASSF10A6NK89 507 aa15.63■□□□□ 0.09
TROAP-210ENST00000549534 POTECB2RU33 542 aa15.63■□□□□ 0.09
TROAP-210ENST00000549534 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
TROAP-210ENST00000549534 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
TROAP-210ENST00000549534 LMNB1P20700 586 aa15.62■□□□□ 0.09
TROAP-210ENST00000549534 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
TROAP-210ENST00000549534 DEFB115Q30KQ5 88 aa15.61■□□□□ 0.09
TROAP-210ENST00000549534 BRCA1P38398 1863 aaKnown RBP15.61■□□□□ 0.09
TROAP-210ENST00000549534 C4BP0C0L5 1744 aa15.6■□□□□ 0.09
TROAP-210ENST00000549534 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
TROAP-210ENST00000549534 DOT1LQ8TEK3 1739 aa15.6■□□□□ 0.09
TROAP-210ENST00000549534 DLL1O00548 723 aa15.59■□□□□ 0.09
TROAP-210ENST00000549534 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
TROAP-210ENST00000549534 PALLDQ8WX93 1383 aa15.59■□□□□ 0.09
TROAP-210ENST00000549534 TOGARAM1Q9Y4F4 1720 aa15.58■□□□□ 0.08
TROAP-210ENST00000549534 SOX12O15370 315 aa15.58■□□□□ 0.08
TROAP-210ENST00000549534 NFAT5O94916 1531 aa15.58■□□□□ 0.08
TROAP-210ENST00000549534 SBF1O95248 1867 aa15.57■□□□□ 0.08
TROAP-210ENST00000549534 HABP4Q5JVS0 413 aaKnown RBP15.56■□□□□ 0.08
TROAP-210ENST00000549534 ANKRD24Q8TF21 1146 aa15.56■□□□□ 0.08
TROAP-210ENST00000549534 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
TROAP-210ENST00000549534 UBR3Q6ZT12 1888 aa15.56■□□□□ 0.08
TROAP-210ENST00000549534 SMARCC1Q92922 1105 aaPredicted RBP15.55■□□□□ 0.08
TROAP-210ENST00000549534 CA12O43570 354 aa15.54■□□□□ 0.08
TROAP-210ENST00000549534 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
TROAP-210ENST00000549534 TMF1P82094 1093 aa15.54■□□□□ 0.08
TROAP-210ENST00000549534 DGKZQ13574 1117 aa15.54■□□□□ 0.08
TROAP-210ENST00000549534 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
TROAP-210ENST00000549534 ZCRB1Q8TBF4 217 aaKnown RBP15.54■□□□□ 0.08
TROAP-210ENST00000549534 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms