RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
C12orf49-202ENST00000547606 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
C12orf49-202ENST00000547606 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
C12orf49-202ENST00000547606 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
C12orf49-202ENST00000547606 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
C12orf49-202ENST00000547606 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
C12orf49-202ENST00000547606 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
C12orf49-202ENST00000547606 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
C12orf49-202ENST00000547606 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
C12orf49-202ENST00000547606 NBPF6Q5VWK0 638 aa17.99■□□□□ 0.47
C12orf49-202ENST00000547606 NBPF4Q96M43 638 aa17.99■□□□□ 0.47
C12orf49-202ENST00000547606 MTHFSP49914 203 aa17.98■□□□□ 0.47
C12orf49-202ENST00000547606 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
C12orf49-202ENST00000547606 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
C12orf49-202ENST00000547606 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
C12orf49-202ENST00000547606 IL2RBP14784 551 aa17.96■□□□□ 0.47
C12orf49-202ENST00000547606 PTGER2P43116 358 aa17.96■□□□□ 0.47
C12orf49-202ENST00000547606 DDB1Q16531 1140 aa17.96■□□□□ 0.47
C12orf49-202ENST00000547606 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
C12orf49-202ENST00000547606 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
C12orf49-202ENST00000547606 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
C12orf49-202ENST00000547606 EYA1Q99502 592 aa17.94■□□□□ 0.46
C12orf49-202ENST00000547606 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
C12orf49-202ENST00000547606 OVOS2A0A0G2JMS6 1433 aa17.93■□□□□ 0.46
C12orf49-202ENST00000547606 EXOC5O00471 708 aa17.93■□□□□ 0.46
C12orf49-202ENST00000547606 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
C12orf49-202ENST00000547606 MEGF6O75095 1541 aa17.93■□□□□ 0.46
C12orf49-202ENST00000547606 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
C12orf49-202ENST00000547606 TNS2Q63HR2 1409 aa17.91■□□□□ 0.46
C12orf49-202ENST00000547606 PLSCR1O15162 318 aa17.91■□□□□ 0.46
C12orf49-202ENST00000547606 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
C12orf49-202ENST00000547606 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
C12orf49-202ENST00000547606 TATP17735 454 aaPredicted RBP17.9■□□□□ 0.46
C12orf49-202ENST00000547606 IL13P35225 146 aa17.9■□□□□ 0.46
C12orf49-202ENST00000547606 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.46
C12orf49-202ENST00000547606 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
C12orf49-202ENST00000547606 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.45
C12orf49-202ENST00000547606 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
C12orf49-202ENST00000547606 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
C12orf49-202ENST00000547606 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
C12orf49-202ENST00000547606 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
C12orf49-202ENST00000547606 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
C12orf49-202ENST00000547606 RALBP1Q15311 655 aa17.87■□□□□ 0.45
C12orf49-202ENST00000547606 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
C12orf49-202ENST00000547606 NCAPD2Q15021 1401 aa17.87■□□□□ 0.45
C12orf49-202ENST00000547606 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
C12orf49-202ENST00000547606 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
C12orf49-202ENST00000547606 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
C12orf49-202ENST00000547606 PROM2Q8N271 834 aa17.85■□□□□ 0.45
C12orf49-202ENST00000547606 HMOX1P09601 288 aa17.84■□□□□ 0.45
C12orf49-202ENST00000547606 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
C12orf49-202ENST00000547606 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
C12orf49-202ENST00000547606 MTFR1LQ9H019 292 aa17.83■□□□□ 0.44
C12orf49-202ENST00000547606 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
C12orf49-202ENST00000547606 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
C12orf49-202ENST00000547606 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 GPR162Q16538 588 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 ACSBG1Q96GR2 724 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 ARXQ96QS3 562 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
C12orf49-202ENST00000547606 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
C12orf49-202ENST00000547606 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
C12orf49-202ENST00000547606 PKD1L3Q7Z443 1732 aa17.8■□□□□ 0.44
C12orf49-202ENST00000547606 KDRP35968 1356 aa17.79■□□□□ 0.44
C12orf49-202ENST00000547606 TXNRD1Q16881 649 aa17.79■□□□□ 0.44
C12orf49-202ENST00000547606 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
C12orf49-202ENST00000547606 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
C12orf49-202ENST00000547606 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
C12orf49-202ENST00000547606 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
C12orf49-202ENST00000547606 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
C12orf49-202ENST00000547606 CYP27B1O15528 508 aa17.77■□□□□ 0.44
C12orf49-202ENST00000547606 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
C12orf49-202ENST00000547606 BCL9O00512 1426 aa17.77■□□□□ 0.44
C12orf49-202ENST00000547606 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
C12orf49-202ENST00000547606 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
C12orf49-202ENST00000547606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.43
C12orf49-202ENST00000547606 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
C12orf49-202ENST00000547606 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
C12orf49-202ENST00000547606 BTAF1O14981 1849 aa17.75■□□□□ 0.43
C12orf49-202ENST00000547606 ANP32CO43423 234 aa17.75■□□□□ 0.43
C12orf49-202ENST00000547606 AMOTQ4VCS5 1084 aa17.75■□□□□ 0.43
C12orf49-202ENST00000547606 ZNF530Q6P9A1 599 aaPredicted RBP17.75■□□□□ 0.43
C12orf49-202ENST00000547606 SYTL4Q96C24 671 aaPredicted RBP17.75■□□□□ 0.43
C12orf49-202ENST00000547606 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
C12orf49-202ENST00000547606 PHKG2P15735 406 aa17.74■□□□□ 0.43
C12orf49-202ENST00000547606 IFNL2Q8IZJ0 200 aa17.74■□□□□ 0.43
C12orf49-202ENST00000547606 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
C12orf49-202ENST00000547606 DOT1LQ8TEK3 1739 aa17.74■□□□□ 0.43
C12orf49-202ENST00000547606 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
C12orf49-202ENST00000547606 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
C12orf49-202ENST00000547606 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
C12orf49-202ENST00000547606 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
C12orf49-202ENST00000547606 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
C12orf49-202ENST00000547606 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
C12orf49-202ENST00000547606 NKX1-1Q15270 411 aaPredicted RBP17.69■□□□□ 0.42
C12orf49-202ENST00000547606 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
C12orf49-202ENST00000547606 FCHSD2O94868 740 aa17.68■□□□□ 0.42
C12orf49-202ENST00000547606 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms