RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DDX54Q8TDD1 881 aaKnown RBP29.29■■■□□ 2.28
SCARB1-210ENST00000545493 POLR3GLQ9BT43 218 aa29.29■■■□□ 2.28
SCARB1-210ENST00000545493 NCAPD2Q15021 1401 aa29.28■■■□□ 2.28
SCARB1-210ENST00000545493 NSD2O96028 1365 aa29.27■■■□□ 2.28
SCARB1-210ENST00000545493 CGNL1Q0VF96 1302 aa29.27■■■□□ 2.28
SCARB1-210ENST00000545493 MAP2P11137 1827 aaKnown RBP29.27■■■□□ 2.28
SCARB1-210ENST00000545493 PKD1L3Q7Z443 1732 aa29.26■■■□□ 2.27
SCARB1-210ENST00000545493 KAT6BQ8WYB5 2073 aa29.25■■■□□ 2.27
SCARB1-210ENST00000545493 ZCRB1Q8TBF4 217 aaKnown RBP29.25■■■□□ 2.27
SCARB1-210ENST00000545493 PDGFDQ9GZP0 370 aaPredicted RBP29.25■■■□□ 2.27
SCARB1-210ENST00000545493 LY75O60449 1722 aa29.25■■■□□ 2.27
SCARB1-210ENST00000545493 STK32BQ9NY57 414 aa29.22■■■□□ 2.27
SCARB1-210ENST00000545493 TOGARAM1Q9Y4F4 1720 aa29.22■■■□□ 2.27
SCARB1-210ENST00000545493 SLC15A2Q16348 729 aa29.21■■■□□ 2.27
SCARB1-210ENST00000545493 SPON1Q9HCB6 807 aa29.21■■■□□ 2.27
SCARB1-210ENST00000545493 RAPGEF4Q8WZA2 1011 aa29.19■■■□□ 2.26
SCARB1-210ENST00000545493 TUBGCP6Q96RT7 1819 aa29.18■■■□□ 2.26
SCARB1-210ENST00000545493 QSER1Q2KHR3 1735 aa29.18■■■□□ 2.26
SCARB1-210ENST00000545493 LRRC4BQ9NT99 713 aa29.18■■■□□ 2.26
SCARB1-210ENST00000545493 TATP17735 454 aaPredicted RBP29.17■■■□□ 2.26
SCARB1-210ENST00000545493 WASHC2AQ641Q2 1341 aa29.17■■■□□ 2.26
SCARB1-210ENST00000545493 PRIM1P49642 420 aaKnown RBP29.16■■■□□ 2.26
SCARB1-210ENST00000545493 ZNF827Q17R98 1081 aa29.16■■■□□ 2.26
SCARB1-210ENST00000545493 SYTL4Q96C24 671 aaPredicted RBP29.16■■■□□ 2.26
SCARB1-210ENST00000545493 PPM1GO15355 546 aaPredicted RBP29.15■■■□□ 2.26
SCARB1-210ENST00000545493 ZBTB7AO95365 584 aa29.15■■■□□ 2.26
SCARB1-210ENST00000545493 PANK3Q9H999 370 aa29.15■■■□□ 2.26
SCARB1-210ENST00000545493 POLKQ9UBT6 870 aa29.15■■■□□ 2.26
SCARB1-210ENST00000545493 PCDH11XQ9BZA7 1347 aa29.15■■■□□ 2.26
SCARB1-210ENST00000545493 PCDH11YQ9BZA8 1340 aa29.15■■■□□ 2.26
SCARB1-210ENST00000545493 PPP1R1BQ9UD71 204 aaPredicted RBP29.11■■■□□ 2.25
SCARB1-210ENST00000545493 PTGER2P43116 358 aa29.1■■■□□ 2.25
SCARB1-210ENST00000545493 TNNT2P45379 298 aaPredicted RBP29.1■■■□□ 2.25
SCARB1-210ENST00000545493 SLC27A3Q5K4L6 730 aa29.1■■■□□ 2.25
SCARB1-210ENST00000545493 ITGB4P16144 1822 aa29.1■■■□□ 2.25
SCARB1-210ENST00000545493 CYP27B1O15528 508 aa29.09■■■□□ 2.25
SCARB1-210ENST00000545493 AKT1S1Q96B36 256 aa29.08■■■□□ 2.25
SCARB1-210ENST00000545493 EYA1Q99502 592 aa29.08■■■□□ 2.25
SCARB1-210ENST00000545493 C5P01031 1676 aa29.06■■■□□ 2.24
SCARB1-210ENST00000545493 KCNQ4P56696 695 aa29.06■■■□□ 2.24
SCARB1-210ENST00000545493 KIF7Q2M1P5 1343 aa29.05■■■□□ 2.24
SCARB1-210ENST00000545493 EIF4A2Q14240 407 aaKnown RBP29.05■■■□□ 2.24
SCARB1-210ENST00000545493 MTFR1LQ9H019 292 aa29.05■■■□□ 2.24
SCARB1-210ENST00000545493 ATF5Q9Y2D1 282 aaPredicted RBP29.05■■■□□ 2.24
SCARB1-210ENST00000545493 COL24A1Q17RW2 1714 aa29.05■■■□□ 2.24
SCARB1-210ENST00000545493 SGIP1Q9BQI5 828 aa29.04■■■□□ 2.24
SCARB1-210ENST00000545493 UTRNP46939 3433 aa29.04■■■□□ 2.24
SCARB1-210ENST00000545493 TAF1LQ8IZX4 1826 aa29.01■■■□□ 2.24
SCARB1-210ENST00000545493 PNPLA7Q6ZV29 1317 aa29■■■□□ 2.23
SCARB1-210ENST00000545493 IGSF1Q8N6C5 1336 aa29■■■□□ 2.23
SCARB1-210ENST00000545493 CCNL1Q9UK58 526 aaPredicted RBP29■■■□□ 2.23
SCARB1-210ENST00000545493 PALLDQ8WX93 1383 aa28.99■■■□□ 2.23
SCARB1-210ENST00000545493 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
SCARB1-210ENST00000545493 NKX1-1Q15270 411 aaPredicted RBP28.97■■■□□ 2.23
SCARB1-210ENST00000545493 SPG7Q9UQ90 795 aa28.96■■■□□ 2.23
SCARB1-210ENST00000545493 AMER1Q5JTC6 1135 aaPredicted RBP28.95■■■□□ 2.22
SCARB1-210ENST00000545493 MPRIPQ6WCQ1 1025 aa28.95■■■□□ 2.22
SCARB1-210ENST00000545493 MORC1Q86VD1 984 aa28.95■■■□□ 2.22
SCARB1-210ENST00000545493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.95■■■□□ 2.22
SCARB1-210ENST00000545493 KNSTRNQ9Y448 316 aa28.94■■■□□ 2.22
SCARB1-210ENST00000545493 TFCP2L1Q9NZI6 479 aa28.93■■■□□ 2.22
SCARB1-210ENST00000545493 C4BP0C0L5 1744 aa28.93■■■□□ 2.22
SCARB1-210ENST00000545493 PHKG2P15735 406 aa28.92■■■□□ 2.22
SCARB1-210ENST00000545493 FHDC1Q9C0D6 1143 aaPredicted RBP28.91■■■□□ 2.22
SCARB1-210ENST00000545493 PIGBQ92521 554 aa28.9■■■□□ 2.22
SCARB1-210ENST00000545493 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
SCARB1-210ENST00000545493 IFNL2Q8IZJ0 200 aa28.88■■■□□ 2.21
SCARB1-210ENST00000545493 SLC16A10Q8TF71 515 aa28.88■■■□□ 2.21
SCARB1-210ENST00000545493 ARXQ96QS3 562 aa28.88■■■□□ 2.21
SCARB1-210ENST00000545493 UBR3Q6ZT12 1888 aa28.87■■■□□ 2.21
SCARB1-210ENST00000545493 AEBP1Q8IUX7 1158 aa28.86■■■□□ 2.21
SCARB1-210ENST00000545493 SYT17Q9BSW7 474 aa28.86■■■□□ 2.21
SCARB1-210ENST00000545493 GOLGB1Q14789 3259 aaKnown RBP28.85■■■□□ 2.21
SCARB1-210ENST00000545493 SMARCC1Q92922 1105 aaPredicted RBP28.85■■■□□ 2.21
SCARB1-210ENST00000545493 KDRP35968 1356 aa28.85■■■□□ 2.21
SCARB1-210ENST00000545493 KDM6AO15550 1401 aaPredicted RBP28.85■■■□□ 2.21
SCARB1-210ENST00000545493 PER1O15534 1290 aaPredicted RBP28.84■■■□□ 2.21
SCARB1-210ENST00000545493 TMOD3Q9NYL9 352 aa28.83■■■□□ 2.21
SCARB1-210ENST00000545493 COL23A1Q86Y22 540 aaPredicted RBP28.82■■■□□ 2.2
SCARB1-210ENST00000545493 IL13P35225 146 aa28.81■■■□□ 2.2
SCARB1-210ENST00000545493 AMIGO3Q86WK7 504 aa28.79■■■□□ 2.2
SCARB1-210ENST00000545493 ZNF831Q5JPB2 1677 aa28.78■■■□□ 2.2
SCARB1-210ENST00000545493 POLD1P28340 1107 aa28.78■■■□□ 2.2
SCARB1-210ENST00000545493 ASAP1Q9ULH1 1129 aa28.78■■■□□ 2.2
SCARB1-210ENST00000545493 LOC102724428A0A0B4J2F2 783 aa28.77■■■□□ 2.2
SCARB1-210ENST00000545493 SIK1P57059 783 aa28.77■■■□□ 2.2
SCARB1-210ENST00000545493 PLEKHO1Q53GL0 409 aaPredicted RBP28.77■■■□□ 2.2
SCARB1-210ENST00000545493 SULT6B1Q6IMI4 303 aa28.77■■■□□ 2.2
SCARB1-210ENST00000545493 ZNF530Q6P9A1 599 aaPredicted RBP28.77■■■□□ 2.2
SCARB1-210ENST00000545493 CC2D1BQ5T0F9 858 aaKnown RBP28.76■■■□□ 2.19
SCARB1-210ENST00000545493 LINC00116Q8NCU8 138 aa28.76■■■□□ 2.19
SCARB1-210ENST00000545493 COL5A3P25940 1745 aaPredicted RBP28.76■■■□□ 2.19
SCARB1-210ENST00000545493 COL3A1P02461 1466 aaPredicted RBP28.76■■■□□ 2.19
SCARB1-210ENST00000545493 DCAF8L1A6NGE4 600 aa28.75■■■□□ 2.19
SCARB1-210ENST00000545493 AMOTQ4VCS5 1084 aa28.75■■■□□ 2.19
SCARB1-210ENST00000545493 ATG3Q9NT62 314 aa28.75■■■□□ 2.19
SCARB1-210ENST00000545493 SCN11AQ9UI33 1791 aa28.75■■■□□ 2.19
SCARB1-210ENST00000545493 NPC1L1Q9UHC9 1359 aa28.75■■■□□ 2.19
SCARB1-210ENST00000545493 MSH5O43196 834 aa28.74■■■□□ 2.19
SCARB1-210ENST00000545493 MTHFSP49914 203 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 346.3 ms