RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 CDC42BPGQ6DT37 1551 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 DNTTIP2Q5QJE6 756 aaKnown RBP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 KIF3AQ9Y496 699 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 BMP2KLQ5H9B9 411 aa23.61■■□□□ 1.37
LYSMD4-210ENST00000545021 POLR3AO14802 1390 aaPredicted RBP23.6■■□□□ 1.37
LYSMD4-210ENST00000545021 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
LYSMD4-210ENST00000545021 TAF7LQ5H9L4 462 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 PIBF1Q8WXW3 757 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 JARID2Q92833 1246 aaPredicted RBP23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 NUCB1Q02818 461 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 GPT2Q8TD30 523 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 TSC1Q92574 1164 aa23.59■■□□□ 1.37
LYSMD4-210ENST00000545021 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
LYSMD4-210ENST00000545021 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.36
LYSMD4-210ENST00000545021 DDX19BQ9UMR2 479 aa23.58■■□□□ 1.36
LYSMD4-210ENST00000545021 AK9Q5TCS8 1911 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 NHSL1Q5SYE7 1610 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
LYSMD4-210ENST00000545021 PDCL2Q8N4E4 241 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 RBM27Q9P2N5 1060 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 MST1RQ04912 1400 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
LYSMD4-210ENST00000545021 HSPA1LP34931 641 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 PHLPP1O60346 1717 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 BCL2L12Q9HB09 334 aa23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 YTHDC2Q9H6S0 1430 aaKnown RBP23.55■■□□□ 1.36
LYSMD4-210ENST00000545021 RUNDC1Q96C34 613 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 TMEM63CQ9P1W3 806 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 NOLC1Q14978 699 aaKnown RBP eCLIP23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 CCDC27Q2M243 656 aa23.54■■□□□ 1.36
LYSMD4-210ENST00000545021 SYCE3A1L190 88 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 PRPF40AO75400 957 aaKnown RBP23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 CT47B1P0C2W7 299 aaPredicted RBP23.53■■□□□ 1.36
LYSMD4-210ENST00000545021 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 FEZ1Q99689 392 aa23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 CWC22Q9HCG8 908 aaKnown RBP23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 MED1Q15648 1581 aaPredicted RBP23.52■■□□□ 1.36
LYSMD4-210ENST00000545021 ATF3P18847 181 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 FKBP5Q13451 457 aaPredicted RBP23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 SPTLC3Q9NUV7 552 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 CHD1LQ86WJ1 897 aa23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 CGNQ9P2M7 1197 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-210ENST00000545021 SPDYE4A6NLX3 237 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 ANKRD7Q92527 254 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 ZNF830Q96NB3 372 aaPredicted RBP23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 RABEP1Q15276 862 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 NCBP3Q53F19 620 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 TCP11L2Q8N4U5 519 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 FMN2Q9NZ56 1722 aa23.5■■□□□ 1.35
LYSMD4-210ENST00000545021 MBD3O95983 291 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 TBC1D9Q6ZT07 1266 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 NEUROD2Q15784 382 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 LNPKQ9C0E8 428 aa23.49■■□□□ 1.35
LYSMD4-210ENST00000545021 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 TRIM27P14373 513 aa23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
LYSMD4-210ENST00000545021 GABPB1Q06547 395 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 ZNF771Q7L3S4 317 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 RNF214Q8ND24 703 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 TSPY26PQ9H489 355 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 ZBTB40Q9NUA8 1239 aa23.47■■□□□ 1.35
LYSMD4-210ENST00000545021 CDK11BP21127 795 aaKnown RBP23.46■■□□□ 1.35
LYSMD4-210ENST00000545021 VGLL3A8MV65 326 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 PKP1Q13835 747 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 C14orf37Q86TY3 774 aa23.45■■□□□ 1.35
LYSMD4-210ENST00000545021 OGFRQ9NZT2 677 aa23.45■■□□□ 1.34
LYSMD4-210ENST00000545021 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
LYSMD4-210ENST00000545021 U2AF2P26368 475 aaKnown RBP eCLIP23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 DIAPH3Q9NSV4 1193 aa23.44■■□□□ 1.34
LYSMD4-210ENST00000545021 SLC20A2Q08357 652 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 ATF7IPQ6VMQ6 1270 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
LYSMD4-210ENST00000545021 UVSSAQ2YD98 709 aa23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 NSFL1CQ9UNZ2 370 aaKnown RBP23.42■■□□□ 1.34
LYSMD4-210ENST00000545021 CTIFO43310 598 aaKnown RBP23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 ZDHHC9Q9Y397 364 aa23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
LYSMD4-210ENST00000545021 FAM184AQ8NB25 1140 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 IGSF3O75054 1194 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 CDC45O75419 566 aa23.4■■□□□ 1.34
LYSMD4-210ENST00000545021 JCADQ9P266 1359 aa23.39■■□□□ 1.34
LYSMD4-210ENST00000545021 ZBTB22O15209 634 aa23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 IRX5P78411 483 aaPredicted RBP23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
LYSMD4-210ENST00000545021 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms