RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SHANK3Q9BYB0 1731 aa14.25□□□□□ -0.13
NPIPB3-210ENST00000542817 PLEKHG2Q9H7P9 1386 aa14.24□□□□□ -0.13
NPIPB3-210ENST00000542817 LRRC37A3O60309 1634 aa14.24□□□□□ -0.13
NPIPB3-210ENST00000542817 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
NPIPB3-210ENST00000542817 RGS12O14924 1447 aa14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 RXRBP28702 533 aa14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 MYT1Q01538 1121 aa14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 PKD1L3Q7Z443 1732 aa14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
NPIPB3-210ENST00000542817 CYP27B1O15528 508 aa14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 RAPGEF4Q8WZA2 1011 aa14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 CDCA7Q9BWT1 371 aaPredicted RBP14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
NPIPB3-210ENST00000542817 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
NPIPB3-210ENST00000542817 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.13
NPIPB3-210ENST00000542817 MARCH10Q8NA82 808 aaPredicted RBP14.21□□□□□ -0.13
NPIPB3-210ENST00000542817 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
NPIPB3-210ENST00000542817 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
NPIPB3-210ENST00000542817 BRWD3Q6RI45 1802 aa14.18□□□□□ -0.14
NPIPB3-210ENST00000542817 DDB1Q16531 1140 aa14.18□□□□□ -0.14
NPIPB3-210ENST00000542817 EXOC5O00471 708 aa14.17□□□□□ -0.14
NPIPB3-210ENST00000542817 PHKG2P15735 406 aa14.17□□□□□ -0.14
NPIPB3-210ENST00000542817 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
NPIPB3-210ENST00000542817 AMOTQ4VCS5 1084 aa14.17□□□□□ -0.14
NPIPB3-210ENST00000542817 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
NPIPB3-210ENST00000542817 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 APAF1O14727 1248 aa14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 TMPOP42166 694 aaKnown RBP14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 KDM6AO15550 1401 aaPredicted RBP14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 ADAMTS7Q9UKP4 1686 aa14.16□□□□□ -0.14
NPIPB3-210ENST00000542817 FAM182BQ5T319 152 aa14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 ZNF530Q6P9A1 599 aaPredicted RBP14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 SPG7Q9UQ90 795 aa14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 RRP7AQ9Y3A4 280 aaKnown RBP14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 BCL9O00512 1426 aa14.15□□□□□ -0.14
NPIPB3-210ENST00000542817 AKAP4Q5JQC9 854 aa14.15□□□□□ -0.15
NPIPB3-210ENST00000542817 IL17REQ8NFR9 667 aa14.15□□□□□ -0.15
NPIPB3-210ENST00000542817 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.15
NPIPB3-210ENST00000542817 LGR6Q9HBX8 967 aa14.15□□□□□ -0.15
NPIPB3-210ENST00000542817 IFNL2Q8IZJ0 200 aa14.14□□□□□ -0.15
NPIPB3-210ENST00000542817 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
NPIPB3-210ENST00000542817 CEMIPQ8WUJ3 1361 aa14.13□□□□□ -0.15
NPIPB3-210ENST00000542817 TOGARAM1Q9Y4F4 1720 aa14.13□□□□□ -0.15
NPIPB3-210ENST00000542817 PTF1AQ7RTS3 328 aa14.13□□□□□ -0.15
NPIPB3-210ENST00000542817 KRT27Q7Z3Y8 459 aa14.13□□□□□ -0.15
NPIPB3-210ENST00000542817 MAP3K5Q99683 1374 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 A0A0G2JS52 829 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 RIPK4P57078 832 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 PDE3BQ13370 1112 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
NPIPB3-210ENST00000542817 ZNF521Q96K83 1311 aa14.11□□□□□ -0.15
NPIPB3-210ENST00000542817 RNMTO43148 476 aaKnown RBP14.11□□□□□ -0.15
NPIPB3-210ENST00000542817 ILDR2Q71H61 639 aa14.11□□□□□ -0.15
NPIPB3-210ENST00000542817 THUMPD2Q9BTF0 503 aaKnown RBP14.11□□□□□ -0.15
NPIPB3-210ENST00000542817 KCNQ2O43526 872 aa14.1□□□□□ -0.15
NPIPB3-210ENST00000542817 HTATSF1O43719 755 aaKnown RBP14.1□□□□□ -0.15
NPIPB3-210ENST00000542817 NEUROD2Q15784 382 aa14.1□□□□□ -0.15
NPIPB3-210ENST00000542817 MCM10Q7L590 875 aa14.1□□□□□ -0.15
NPIPB3-210ENST00000542817 DCAF5Q96JK2 942 aa14.1□□□□□ -0.15
NPIPB3-210ENST00000542817 MRC1P22897 1456 aa14.09□□□□□ -0.15
NPIPB3-210ENST00000542817 CCDC27Q2M243 656 aa14.09□□□□□ -0.15
NPIPB3-210ENST00000542817 C1orf141Q5JVX7 400 aa14.09□□□□□ -0.15
NPIPB3-210ENST00000542817 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
NPIPB3-210ENST00000542817 WWC1Q8IX03 1113 aa14.08□□□□□ -0.16
NPIPB3-210ENST00000542817 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
NPIPB3-210ENST00000542817 ERVV-2B6SEH9 535 aa14.07□□□□□ -0.16
NPIPB3-210ENST00000542817 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
NPIPB3-210ENST00000542817 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
NPIPB3-210ENST00000542817 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 FAM196AQ6ZSG2 479 aa14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 PIGBQ92521 554 aa14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 SLC52A2Q9HAB3 445 aa14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
NPIPB3-210ENST00000542817 VIRMAQ69YN4 1812 aaKnown RBP14.05□□□□□ -0.16
NPIPB3-210ENST00000542817 NEFMP07197 916 aa14.05□□□□□ -0.16
NPIPB3-210ENST00000542817 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
NPIPB3-210ENST00000542817 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
NPIPB3-210ENST00000542817 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
NPIPB3-210ENST00000542817 ITGB4P16144 1822 aa14.04□□□□□ -0.16
NPIPB3-210ENST00000542817 CHL1O00533 1208 aa14.02□□□□□ -0.17
NPIPB3-210ENST00000542817 KCNQ3O43525 872 aa14.02□□□□□ -0.17
NPIPB3-210ENST00000542817 TRIM37O94972 964 aa14.02□□□□□ -0.17
NPIPB3-210ENST00000542817 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms