RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 CDCA7Q9BWT1 371 aaPredicted RBP28.25■■■□□ 2.11
C12orf43-208ENST00000539736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.25■■■□□ 2.11
C12orf43-208ENST00000539736 OVOS2A0A0G2JMS6 1433 aa28.25■■■□□ 2.11
C12orf43-208ENST00000539736 WNK3Q9BYP7 1800 aa28.25■■■□□ 2.11
C12orf43-208ENST00000539736 APAF1O14727 1248 aa28.24■■■□□ 2.11
C12orf43-208ENST00000539736 PLEKHO1Q53GL0 409 aaPredicted RBP28.24■■■□□ 2.11
C12orf43-208ENST00000539736 GJD4Q96KN9 370 aaPredicted RBP28.24■■■□□ 2.11
C12orf43-208ENST00000539736 NCBP3Q53F19 620 aaKnown RBP28.23■■■□□ 2.11
C12orf43-208ENST00000539736 QTRT2Q9H974 415 aaKnown RBP28.23■■■□□ 2.11
C12orf43-208ENST00000539736 NGEFQ8N5V2 710 aa28.22■■■□□ 2.11
C12orf43-208ENST00000539736 GAS2L2Q8NHY3 880 aa28.22■■■□□ 2.11
C12orf43-208ENST00000539736 TMPOP42166 694 aaKnown RBP28.21■■■□□ 2.11
C12orf43-208ENST00000539736 NFE2L2Q16236 605 aa28.21■■■□□ 2.11
C12orf43-208ENST00000539736 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
C12orf43-208ENST00000539736 PKD1L3Q7Z443 1732 aa28.21■■■□□ 2.11
C12orf43-208ENST00000539736 SPG7Q9UQ90 795 aa28.2■■■□□ 2.1
C12orf43-208ENST00000539736 GLI3P10071 1580 aa28.2■■■□□ 2.1
C12orf43-208ENST00000539736 HNRNPUQ00839 825 aaKnown RBP eCLIP28.18■■■□□ 2.1
C12orf43-208ENST00000539736 ZCRB1Q8TBF4 217 aaKnown RBP28.17■■■□□ 2.1
C12orf43-208ENST00000539736 ONECUT3O60422 494 aaPredicted RBP28.15■■■□□ 2.1
C12orf43-208ENST00000539736 RIPK4P57078 832 aa28.15■■■□□ 2.1
C12orf43-208ENST00000539736 FAM98CQ17RN3 349 aaKnown RBP28.15■■■□□ 2.1
C12orf43-208ENST00000539736 RGS17Q9UGC6 210 aaPredicted RBP28.15■■■□□ 2.1
C12orf43-208ENST00000539736 RRP7AQ9Y3A4 280 aaKnown RBP28.15■■■□□ 2.1
C12orf43-208ENST00000539736 CCDC27Q2M243 656 aa28.14■■■□□ 2.1
C12orf43-208ENST00000539736 ZNF530Q6P9A1 599 aaPredicted RBP28.14■■■□□ 2.1
C12orf43-208ENST00000539736 PHF23Q9BUL5 403 aaPredicted RBP28.13■■■□□ 2.09
C12orf43-208ENST00000539736 DLG5Q8TDM6 1919 aa28.12■■■□□ 2.09
C12orf43-208ENST00000539736 EXOC5O00471 708 aa28.12■■■□□ 2.09
C12orf43-208ENST00000539736 RBM6P78332 1123 aaKnown RBP28.12■■■□□ 2.09
C12orf43-208ENST00000539736 NEUROD2Q15784 382 aa28.12■■■□□ 2.09
C12orf43-208ENST00000539736 AKAP4Q5JQC9 854 aa28.12■■■□□ 2.09
C12orf43-208ENST00000539736 THSD7AQ9UPZ6 1657 aa28.12■■■□□ 2.09
C12orf43-208ENST00000539736 TNS2Q63HR2 1409 aa28.11■■■□□ 2.09
C12orf43-208ENST00000539736 HTATSF1O43719 755 aaKnown RBP28.11■■■□□ 2.09
C12orf43-208ENST00000539736 LMOD3Q0VAK6 560 aa28.11■■■□□ 2.09
C12orf43-208ENST00000539736 SHANK3Q9BYB0 1731 aa28.11■■■□□ 2.09
C12orf43-208ENST00000539736 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
C12orf43-208ENST00000539736 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
C12orf43-208ENST00000539736 SENP3-EIF4A1A0A087X0R7 540 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 C1orf141Q5JVX7 400 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 IFNL2Q8IZJ0 200 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
C12orf43-208ENST00000539736 TRIM35Q9UPQ4 493 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 LRRC37A3O60309 1634 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 MAP3K5Q99683 1374 aa28.1■■■□□ 2.09
C12orf43-208ENST00000539736 GNAT3A8MTJ3 354 aa28.09■■■□□ 2.09
C12orf43-208ENST00000539736 PHKG2P15735 406 aa28.09■■■□□ 2.09
C12orf43-208ENST00000539736 DDB1Q16531 1140 aa28.09■■■□□ 2.09
C12orf43-208ENST00000539736 CYP27B1O15528 508 aa28.08■■■□□ 2.09
C12orf43-208ENST00000539736 SALL2Q9Y467 1007 aaPredicted RBP28.08■■■□□ 2.09
C12orf43-208ENST00000539736 ZBED9Q6R2W3 1325 aa28.08■■■□□ 2.09
C12orf43-208ENST00000539736 WWC1Q8IX03 1113 aa28.07■■■□□ 2.08
C12orf43-208ENST00000539736 HSP90AB1P08238 724 aaKnown RBP28.06■■■□□ 2.08
C12orf43-208ENST00000539736 ZNF521Q96K83 1311 aa28.06■■■□□ 2.08
C12orf43-208ENST00000539736 RXRBP28702 533 aa28.05■■■□□ 2.08
C12orf43-208ENST00000539736 NKX1-1Q15270 411 aaPredicted RBP28.05■■■□□ 2.08
C12orf43-208ENST00000539736 RTF1Q92541 710 aaKnown RBP28.05■■■□□ 2.08
C12orf43-208ENST00000539736 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
C12orf43-208ENST00000539736 DDX54Q8TDD1 881 aaKnown RBP28.04■■■□□ 2.08
C12orf43-208ENST00000539736 SEPT12Q8IYM1 358 aa28.03■■■□□ 2.08
C12orf43-208ENST00000539736 A0A0G2JS52 829 aa28.02■■■□□ 2.08
C12orf43-208ENST00000539736 MYT1Q01538 1121 aa28.02■■■□□ 2.08
C12orf43-208ENST00000539736 ADAMTS7Q9UKP4 1686 aa28.02■■■□□ 2.08
C12orf43-208ENST00000539736 WDR63Q8IWG1 891 aa28.01■■■□□ 2.07
C12orf43-208ENST00000539736 IL17REQ8NFR9 667 aa28.01■■■□□ 2.07
C12orf43-208ENST00000539736 DCAF5Q96JK2 942 aa28.01■■■□□ 2.07
C12orf43-208ENST00000539736 CEMIPQ8WUJ3 1361 aa27.99■■■□□ 2.07
C12orf43-208ENST00000539736 RNMTO43148 476 aaKnown RBP27.99■■■□□ 2.07
C12orf43-208ENST00000539736 CALD1Q05682 793 aaKnown RBP27.99■■■□□ 2.07
C12orf43-208ENST00000539736 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
C12orf43-208ENST00000539736 DCTN1Q14203 1278 aa27.99■■■□□ 2.07
C12orf43-208ENST00000539736 MPRIPQ6WCQ1 1025 aa27.99■■■□□ 2.07
C12orf43-208ENST00000539736 MCM10Q7L590 875 aa27.99■■■□□ 2.07
C12orf43-208ENST00000539736 MARCH10Q8NA82 808 aaPredicted RBP27.98■■■□□ 2.07
C12orf43-208ENST00000539736 LGR6Q9HBX8 967 aa27.98■■■□□ 2.07
C12orf43-208ENST00000539736 KDM6AO15550 1401 aaPredicted RBP27.98■■■□□ 2.07
C12orf43-208ENST00000539736 IL16Q14005 1332 aa27.97■■■□□ 2.07
C12orf43-208ENST00000539736 SCN11AQ9UI33 1791 aa27.97■■■□□ 2.07
C12orf43-208ENST00000539736 THUMPD2Q9BTF0 503 aaKnown RBP27.96■■■□□ 2.07
C12orf43-208ENST00000539736 VIRMAQ69YN4 1812 aaKnown RBP27.96■■■□□ 2.07
C12orf43-208ENST00000539736 GOLGA2Q08379 1002 aa27.94■■■□□ 2.06
C12orf43-208ENST00000539736 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
C12orf43-208ENST00000539736 MRC1P22897 1456 aa27.91■■■□□ 2.06
C12orf43-208ENST00000539736 BRWD3Q6RI45 1802 aa27.91■■■□□ 2.06
C12orf43-208ENST00000539736 BCL9O00512 1426 aa27.91■■■□□ 2.06
C12orf43-208ENST00000539736 RGS12O14924 1447 aa27.91■■■□□ 2.06
C12orf43-208ENST00000539736 TEFQ10587 303 aa27.9■■■□□ 2.06
C12orf43-208ENST00000539736 IFT57Q9NWB7 429 aa27.9■■■□□ 2.06
C12orf43-208ENST00000539736 E9PSI1 815 aa27.89■■■□□ 2.06
C12orf43-208ENST00000539736 ZNF853P0CG23 659 aa27.89■■■□□ 2.06
C12orf43-208ENST00000539736 KRT27Q7Z3Y8 459 aa27.89■■■□□ 2.06
C12orf43-208ENST00000539736 SLC52A2Q9HAB3 445 aa27.89■■■□□ 2.06
C12orf43-208ENST00000539736 TOGARAM1Q9Y4F4 1720 aa27.89■■■□□ 2.05
C12orf43-208ENST00000539736 SLFN5Q08AF3 891 aa27.88■■■□□ 2.05
C12orf43-208ENST00000539736 TAF7Q15545 349 aaPredicted RBP27.88■■■□□ 2.05
C12orf43-208ENST00000539736 CFAP44Q96MT7 982 aa27.88■■■□□ 2.05
C12orf43-208ENST00000539736 BABAM1Q9NWV8 329 aa27.88■■■□□ 2.05
C12orf43-208ENST00000539736 SIPA1L3O60292 1781 aaPredicted RBP27.88■■■□□ 2.05
C12orf43-208ENST00000539736 GNAI1P63096 354 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms