RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-205ENST00000539661 FAM13BQ9NYF5 915 aa21.55■■□□□ 1.04
RAB40C-205ENST00000539661 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
RAB40C-205ENST00000539661 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
RAB40C-205ENST00000539661 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
RAB40C-205ENST00000539661 SASS6Q6UVJ0 657 aa21.54■■□□□ 1.04
RAB40C-205ENST00000539661 TMEM63CQ9P1W3 806 aa21.54■■□□□ 1.04
RAB40C-205ENST00000539661 ZGPATQ8N5A5 531 aaKnown RBP21.53■■□□□ 1.04
RAB40C-205ENST00000539661 PHACTR3Q96KR7 559 aa21.53■■□□□ 1.04
RAB40C-205ENST00000539661 RBM27Q9P2N5 1060 aaKnown RBP21.53■■□□□ 1.04
RAB40C-205ENST00000539661 POLKQ9UBT6 870 aa21.53■■□□□ 1.04
RAB40C-205ENST00000539661 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
RAB40C-205ENST00000539661 SDSP20132 328 aa21.52■■□□□ 1.04
RAB40C-205ENST00000539661 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.03
RAB40C-205ENST00000539661 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
RAB40C-205ENST00000539661 MCM2P49736 904 aa21.51■■□□□ 1.03
RAB40C-205ENST00000539661 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
RAB40C-205ENST00000539661 SYCE3A1L190 88 aa21.5■■□□□ 1.03
RAB40C-205ENST00000539661 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
RAB40C-205ENST00000539661 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-205ENST00000539661 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-205ENST00000539661 ERC2O15083 957 aa21.49■■□□□ 1.03
RAB40C-205ENST00000539661 C16orf71Q8IYS4 520 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-205ENST00000539661 ARHGEF40Q8TER5 1519 aa21.49■■□□□ 1.03
RAB40C-205ENST00000539661 ELL2O00472 640 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-205ENST00000539661 C8orf58Q8NAV2 365 aa21.49■■□□□ 1.03
RAB40C-205ENST00000539661 ATP7BP35670 1465 aa21.48■■□□□ 1.03
RAB40C-205ENST00000539661 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
RAB40C-205ENST00000539661 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
RAB40C-205ENST00000539661 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
RAB40C-205ENST00000539661 SYAP1Q96A49 352 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-205ENST00000539661 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
RAB40C-205ENST00000539661 DLG5Q8TDM6 1919 aa21.48■■□□□ 1.03
RAB40C-205ENST00000539661 CDK12Q9NYV4 1490 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-205ENST00000539661 SMAP1Q8IYB5 467 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-205ENST00000539661 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
RAB40C-205ENST00000539661 PRDM4Q9UKN5 801 aa21.47■■□□□ 1.03
RAB40C-205ENST00000539661 HMOX1P09601 288 aa21.46■■□□□ 1.03
RAB40C-205ENST00000539661 BRD1O95696 1058 aa21.46■■□□□ 1.03
RAB40C-205ENST00000539661 IL13P35225 146 aa21.46■■□□□ 1.03
RAB40C-205ENST00000539661 CDK19Q9BWU1 502 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 TSPY26PQ9H489 355 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 KIAA2012Q0VF49 1180 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 OSBPL3Q9H4L5 887 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 CABP1Q9NZU7 370 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 MYO5BQ9ULV0 1848 aa21.45■■□□□ 1.02
RAB40C-205ENST00000539661 OTUD7AQ8TE49 926 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-205ENST00000539661 PHF14O94880 888 aa21.44■■□□□ 1.02
RAB40C-205ENST00000539661 CUL4AQ13619 759 aa21.44■■□□□ 1.02
RAB40C-205ENST00000539661 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
RAB40C-205ENST00000539661 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
RAB40C-205ENST00000539661 RGS12O14924 1447 aa21.44■■□□□ 1.02
RAB40C-205ENST00000539661 RTL1A6NKG5 1358 aa21.43■■□□□ 1.02
RAB40C-205ENST00000539661 TMX3Q96JJ7 454 aa21.43■■□□□ 1.02
RAB40C-205ENST00000539661 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
RAB40C-205ENST00000539661 AATKQ6ZMQ8 1374 aa21.42■■□□□ 1.02
RAB40C-205ENST00000539661 UVSSAQ2YD98 709 aa21.42■■□□□ 1.02
RAB40C-205ENST00000539661 FAM184AQ8NB25 1140 aa21.42■■□□□ 1.02
RAB40C-205ENST00000539661 PTPRCP08575 1304 aa21.41■■□□□ 1.02
RAB40C-205ENST00000539661 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
RAB40C-205ENST00000539661 PTMAP06454 111 aaKnown RBP21.41■■□□□ 1.02
RAB40C-205ENST00000539661 NEK4P51957 841 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 ANAPC15P60006 121 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 MYRIPQ8NFW9 859 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 HMMRO75330 724 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 FBLN1P23142 703 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
RAB40C-205ENST00000539661 MCCP23508 829 aa21.39■■□□□ 1.01
RAB40C-205ENST00000539661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
RAB40C-205ENST00000539661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.39■■□□□ 1.01
RAB40C-205ENST00000539661 SMARCA5O60264 1052 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-205ENST00000539661 RNF214Q8ND24 703 aa21.38■■□□□ 1.01
RAB40C-205ENST00000539661 IL17RAQ96F46 866 aa21.38■■□□□ 1.01
RAB40C-205ENST00000539661 MSH6P52701 1360 aa21.38■■□□□ 1.01
RAB40C-205ENST00000539661 KIAA0232Q92628 1395 aa21.38■■□□□ 1.01
RAB40C-205ENST00000539661 HMGN5P82970 282 aaKnown RBP21.38■■□□□ 1.01
RAB40C-205ENST00000539661 CCDC94Q9BW85 323 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-205ENST00000539661 DIP2BQ9P265 1576 aa21.37■■□□□ 1.01
RAB40C-205ENST00000539661 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
RAB40C-205ENST00000539661 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
RAB40C-205ENST00000539661 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
RAB40C-205ENST00000539661 WAPLQ7Z5K2 1190 aa21.37■■□□□ 1.01
RAB40C-205ENST00000539661 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
RAB40C-205ENST00000539661 PDE1AP54750 535 aa21.36■■□□□ 1.01
RAB40C-205ENST00000539661 EMILIN1Q9Y6C2 1016 aa21.36■■□□□ 1.01
RAB40C-205ENST00000539661 SSH2Q76I76 1423 aa21.36■■□□□ 1.01
RAB40C-205ENST00000539661 CHAMP1Q96JM3 812 aa21.36■■□□□ 1.01
RAB40C-205ENST00000539661 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
RAB40C-205ENST00000539661 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
RAB40C-205ENST00000539661 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.014e-9■■■■■ 33
RAB40C-205ENST00000539661 ESYT1Q9BSJ8 1104 aa21.34■■□□□ 1.01
RAB40C-205ENST00000539661 MEIS3Q99687 375 aa21.33■■□□□ 1.01
RAB40C-205ENST00000539661 FAM83GA6ND36 823 aa21.33■■□□□ 1
RAB40C-205ENST00000539661 FOXD4L5Q5VV16 416 aaPredicted RBP21.33■■□□□ 1
RAB40C-205ENST00000539661 FOXD4L4Q8WXT5 416 aaPredicted RBP21.33■■□□□ 1
RAB40C-205ENST00000539661 PREX1Q8TCU6 1659 aa21.33■■□□□ 1
RAB40C-205ENST00000539661 EPB41L2O43491 1005 aaKnown RBP21.32■■□□□ 1
RAB40C-205ENST00000539661 LETM1O95202 739 aaPredicted RBP21.32■■□□□ 1
RAB40C-205ENST00000539661 TMEM87AQ8NBN3 555 aa21.32■■□□□ 1
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