RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 COL18A1P39060 1754 aa26.12■■□□□ 1.77
CDH5-202ENST00000539168 PLEKHO1Q53GL0 409 aaPredicted RBP26.12■■□□□ 1.77
CDH5-202ENST00000539168 BABAM1Q9NWV8 329 aa26.12■■□□□ 1.77
CDH5-202ENST00000539168 PLEKHG5O94827 1062 aa26.12■■□□□ 1.77
CDH5-202ENST00000539168 BRPF1P55201 1214 aaPredicted RBP26.12■■□□□ 1.77
CDH5-202ENST00000539168 DCTN1Q14203 1278 aa26.12■■□□□ 1.77
CDH5-202ENST00000539168 SMC4Q9NTJ3 1288 aa26.12■■□□□ 1.77
CDH5-202ENST00000539168 KIF16BQ96L93 1317 aa26.11■■□□□ 1.77
CDH5-202ENST00000539168 CRB1P82279 1406 aa26.11■■□□□ 1.77
CDH5-202ENST00000539168 MCM10Q7L590 875 aa26.11■■□□□ 1.77
CDH5-202ENST00000539168 AXIN2Q9Y2T1 843 aa26.11■■□□□ 1.77
CDH5-202ENST00000539168 KIAA0232Q92628 1395 aa26.1■■□□□ 1.77
CDH5-202ENST00000539168 IPO8O15397 1037 aaKnown RBP26.1■■□□□ 1.77
CDH5-202ENST00000539168 C20orf194Q5TEA3 1177 aa26.1■■□□□ 1.77
CDH5-202ENST00000539168 ZKSCAN2Q63HK3 967 aa26.1■■□□□ 1.77
CDH5-202ENST00000539168 LMO7Q8WWI1 1683 aa26.1■■□□□ 1.77
CDH5-202ENST00000539168 USHBP1Q8N6Y0 703 aa26.09■■□□□ 1.77
CDH5-202ENST00000539168 FRAT1Q92837 279 aaPredicted RBP26.09■■□□□ 1.77
CDH5-202ENST00000539168 RGPD2P0DJD1 1756 aa26.09■■□□□ 1.77
CDH5-202ENST00000539168 LRRC59Q96AG4 307 aaKnown RBP26.09■■□□□ 1.77
CDH5-202ENST00000539168 LRRC37A3O60309 1634 aa26.08■■□□□ 1.77
CDH5-202ENST00000539168 CABLES1Q8TDN4 633 aa26.08■■□□□ 1.77
CDH5-202ENST00000539168 SSH1Q8WYL5 1049 aa26.08■■□□□ 1.77
CDH5-202ENST00000539168 RGPD5Q99666 1765 aa26.08■■□□□ 1.76
CDH5-202ENST00000539168 VAMP4O75379 141 aa26.07■■□□□ 1.76
CDH5-202ENST00000539168 TWISTNBQ3B726 338 aaPredicted RBP26.06■■□□□ 1.76
CDH5-202ENST00000539168 AHDC1Q5TGY3 1603 aaPredicted RBP26.05■■□□□ 1.76
CDH5-202ENST00000539168 AKAP4Q5JQC9 854 aa26.05■■□□□ 1.76
CDH5-202ENST00000539168 BCL2L13Q9BXK5 485 aa26.04■■□□□ 1.76
CDH5-202ENST00000539168 SOS1Q07889 1333 aaPredicted RBP26.03■■□□□ 1.76
CDH5-202ENST00000539168 CSB-PGBD3P0DP91 1061 aa26.03■■□□□ 1.76
CDH5-202ENST00000539168 PRDM11Q9NQV5 511 aa26.03■■□□□ 1.76
CDH5-202ENST00000539168 TSPYL4Q9UJ04 414 aa26.03■■□□□ 1.76
CDH5-202ENST00000539168 OVOS2A0A0G2JMS6 1433 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 ROBO1Q9Y6N7 1651 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 C1orf141Q5JVX7 400 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 RAPGEF4Q8WZA2 1011 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 ARHGAP45Q92619 1136 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
CDH5-202ENST00000539168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.02■■□□□ 1.76
CDH5-202ENST00000539168 FTSJ3Q8IY81 847 aaKnown RBP26.01■■□□□ 1.75
CDH5-202ENST00000539168 DZIP1LQ8IYY4 767 aaKnown RBP26.01■■□□□ 1.75
CDH5-202ENST00000539168 CEMIPQ8WUJ3 1361 aa26■■□□□ 1.75
CDH5-202ENST00000539168 TAF7Q15545 349 aaPredicted RBP26■■□□□ 1.75
CDH5-202ENST00000539168 ZNF530Q6P9A1 599 aaPredicted RBP26■■□□□ 1.75
CDH5-202ENST00000539168 ATF7IPQ6VMQ6 1270 aa26■■□□□ 1.75
CDH5-202ENST00000539168 IL17REQ8NFR9 667 aa25.99■■□□□ 1.75
CDH5-202ENST00000539168 TATP17735 454 aaPredicted RBP25.99■■□□□ 1.75
CDH5-202ENST00000539168 CHRNA2Q15822 529 aa25.99■■□□□ 1.75
CDH5-202ENST00000539168 C8orf58Q8NAV2 365 aa25.99■■□□□ 1.75
CDH5-202ENST00000539168 TSPYL6Q8N831 410 aa25.98■■□□□ 1.75
CDH5-202ENST00000539168 PANK1Q8TE04 598 aa25.97■■□□□ 1.75
CDH5-202ENST00000539168 NOB1Q9ULX3 412 aaKnown RBP25.97■■□□□ 1.75
CDH5-202ENST00000539168 MRPL50Q8N5N7 158 aaKnown RBP25.96■■□□□ 1.75
CDH5-202ENST00000539168 CHMP4AQ9BY43 222 aa25.96■■□□□ 1.75
CDH5-202ENST00000539168 SPG7Q9UQ90 795 aa25.96■■□□□ 1.75
CDH5-202ENST00000539168 COG6Q9Y2V7 657 aa25.96■■□□□ 1.75
CDH5-202ENST00000539168 WDR17Q8IZU2 1322 aa25.95■■□□□ 1.74
CDH5-202ENST00000539168 TOM1O60784 492 aa25.95■■□□□ 1.74
CDH5-202ENST00000539168 MVPQ14764 893 aaKnown RBP25.95■■□□□ 1.74
CDH5-202ENST00000539168 CHMP4BQ9H444 224 aaKnown RBP25.95■■□□□ 1.74
CDH5-202ENST00000539168 TRIM27P14373 513 aa25.94■■□□□ 1.74
CDH5-202ENST00000539168 CLUAP1Q96AJ1 413 aa25.93■■□□□ 1.74
CDH5-202ENST00000539168 COL22A1Q8NFW1 1626 aaPredicted RBP25.93■■□□□ 1.74
CDH5-202ENST00000539168 ELL2O00472 640 aaPredicted RBP25.93■■□□□ 1.74
CDH5-202ENST00000539168 DDX19BQ9UMR2 479 aa25.93■■□□□ 1.74
CDH5-202ENST00000539168 TEFQ10587 303 aa25.92■■□□□ 1.74
CDH5-202ENST00000539168 CENPQQ7L2Z9 268 aaPredicted RBP25.92■■□□□ 1.74
CDH5-202ENST00000539168 API5Q9BZZ5 524 aaKnown RBP25.92■■□□□ 1.74
CDH5-202ENST00000539168 COL5A2P05997 1499 aaPredicted RBP25.92■■□□□ 1.74
CDH5-202ENST00000539168 RLBP1P12271 317 aa25.9■■□□□ 1.74
CDH5-202ENST00000539168 RNMTO43148 476 aaKnown RBP25.9■■□□□ 1.74
CDH5-202ENST00000539168 ADAMTS7Q9UKP4 1686 aa25.89■■□□□ 1.73
CDH5-202ENST00000539168 HSP90AB1P08238 724 aaKnown RBP25.88■■□□□ 1.73
CDH5-202ENST00000539168 TOM1L2Q6ZVM7 507 aa25.87■■□□□ 1.73
CDH5-202ENST00000539168 CARD10Q9BWT7 1032 aa25.87■■□□□ 1.73
CDH5-202ENST00000539168 MIS18AQ9NYP9 233 aa25.87■■□□□ 1.73
CDH5-202ENST00000539168 HOXB7P09629 217 aa25.87■■□□□ 1.73
CDH5-202ENST00000539168 IFNL2Q8IZJ0 200 aa25.87■■□□□ 1.73
CDH5-202ENST00000539168 PKD1L3Q7Z443 1732 aa25.86■■□□□ 1.73
CDH5-202ENST00000539168 MEGF6O75095 1541 aa25.86■■□□□ 1.73
CDH5-202ENST00000539168 PTPRCP08575 1304 aa25.86■■□□□ 1.73
CDH5-202ENST00000539168 PARP4Q9UKK3 1724 aaKnown RBP25.86■■□□□ 1.73
CDH5-202ENST00000539168 LGR6Q9HBX8 967 aa25.86■■□□□ 1.73
CDH5-202ENST00000539168 KDM2BQ8NHM5 1336 aa25.86■■□□□ 1.73
CDH5-202ENST00000539168 COL14A1Q05707 1796 aaKnown RBP25.85■■□□□ 1.73
CDH5-202ENST00000539168 EVA1CP58658 441 aa25.85■■□□□ 1.73
CDH5-202ENST00000539168 CCDC30Q5VVM6 783 aa25.84■■□□□ 1.73
CDH5-202ENST00000539168 MPRIPQ6WCQ1 1025 aa25.84■■□□□ 1.73
CDH5-202ENST00000539168 TNNQ9UQP3 1299 aa25.84■■□□□ 1.73
CDH5-202ENST00000539168 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
CDH5-202ENST00000539168 PHLPP1O60346 1717 aa25.84■■□□□ 1.73
CDH5-202ENST00000539168 ITPRIPQ8IWB1 547 aa25.83■■□□□ 1.73
CDH5-202ENST00000539168 STK31Q9BXU1 1019 aa25.83■■□□□ 1.73
CDH5-202ENST00000539168 VIRMAQ69YN4 1812 aaKnown RBP25.83■■□□□ 1.73
CDH5-202ENST00000539168 PHKG2P15735 406 aa25.83■■□□□ 1.73
CDH5-202ENST00000539168 BTBD11A6QL63 1104 aa25.82■■□□□ 1.72
CDH5-202ENST00000539168 KRT24Q2M2I5 525 aa25.82■■□□□ 1.72
CDH5-202ENST00000539168 TMEM57Q8N5G2 664 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms