RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 PRKAR2BP31323 418 aa27.16■■□□□ 1.94
COPS7A-208ENST00000538410 SULT6B1Q6IMI4 303 aa27.16■■□□□ 1.94
COPS7A-208ENST00000538410 CRB1P82279 1406 aa27.16■■□□□ 1.94
COPS7A-208ENST00000538410 SALL2Q9Y467 1007 aaPredicted RBP27.16■■□□□ 1.94
COPS7A-208ENST00000538410 MAPK8IP3Q9UPT6 1336 aa27.15■■□□□ 1.94
COPS7A-208ENST00000538410 FAM182BQ5T319 152 aa27.15■■□□□ 1.94
COPS7A-208ENST00000538410 NGEFQ8N5V2 710 aa27.15■■□□□ 1.94
COPS7A-208ENST00000538410 ANKRD24Q8TF21 1146 aa27.15■■□□□ 1.94
COPS7A-208ENST00000538410 KDRP35968 1356 aa27.15■■□□□ 1.94
COPS7A-208ENST00000538410 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.94
COPS7A-208ENST00000538410 TOM1L2Q6ZVM7 507 aa27.12■■□□□ 1.93
COPS7A-208ENST00000538410 DLG5Q8TDM6 1919 aa27.12■■□□□ 1.93
COPS7A-208ENST00000538410 ERBB3P21860 1342 aa27.12■■□□□ 1.93
COPS7A-208ENST00000538410 NEFMP07197 916 aa27.12■■□□□ 1.93
COPS7A-208ENST00000538410 WDR17Q8IZU2 1322 aa27.1■■□□□ 1.93
COPS7A-208ENST00000538410 PDE3BQ13370 1112 aa27.1■■□□□ 1.93
COPS7A-208ENST00000538410 DEFB132Q7Z7B7 95 aa27.1■■□□□ 1.93
COPS7A-208ENST00000538410 NCBP3Q53F19 620 aaKnown RBP27.09■■□□□ 1.93
COPS7A-208ENST00000538410 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
COPS7A-208ENST00000538410 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
COPS7A-208ENST00000538410 PHACTR3Q96KR7 559 aa27.08■■□□□ 1.93
COPS7A-208ENST00000538410 NCAPD2Q15021 1401 aa27.08■■□□□ 1.93
COPS7A-208ENST00000538410 CSB-PGBD3P0DP91 1061 aa27.08■■□□□ 1.93
COPS7A-208ENST00000538410 PARP4Q9UKK3 1724 aaKnown RBP27.08■■□□□ 1.93
COPS7A-208ENST00000538410 RRP7AQ9Y3A4 280 aaKnown RBP27.08■■□□□ 1.93
COPS7A-208ENST00000538410 TMPOP42166 694 aaKnown RBP27.07■■□□□ 1.92
COPS7A-208ENST00000538410 FAM196AQ6ZSG2 479 aa27.07■■□□□ 1.92
COPS7A-208ENST00000538410 ZNF521Q96K83 1311 aa27.07■■□□□ 1.92
COPS7A-208ENST00000538410 BAG6P46379 1132 aa27.05■■□□□ 1.92
COPS7A-208ENST00000538410 NEUROD2Q15784 382 aa27.05■■□□□ 1.92
COPS7A-208ENST00000538410 USHBP1Q8N6Y0 703 aa27.05■■□□□ 1.92
COPS7A-208ENST00000538410 CCDC27Q2M243 656 aa27.05■■□□□ 1.92
COPS7A-208ENST00000538410 NFE2L2Q16236 605 aa27.03■■□□□ 1.92
COPS7A-208ENST00000538410 WNK3Q9BYP7 1800 aa27.03■■□□□ 1.92
COPS7A-208ENST00000538410 CARD10Q9BWT7 1032 aa27.02■■□□□ 1.92
COPS7A-208ENST00000538410 WWC1Q8IX03 1113 aa27.01■■□□□ 1.92
COPS7A-208ENST00000538410 RIPK4P57078 832 aa27.01■■□□□ 1.91
COPS7A-208ENST00000538410 TNS1Q9HBL0 1735 aaKnown RBP27■■□□□ 1.91
COPS7A-208ENST00000538410 CDCA7Q9BWT1 371 aaPredicted RBP27■■□□□ 1.91
COPS7A-208ENST00000538410 NLRP2Q9NX02 1062 aa27■■□□□ 1.91
COPS7A-208ENST00000538410 TRIM37O94972 964 aa26.99■■□□□ 1.91
COPS7A-208ENST00000538410 DDB1Q16531 1140 aa26.99■■□□□ 1.91
COPS7A-208ENST00000538410 LRRC37A3O60309 1634 aa26.98■■□□□ 1.91
COPS7A-208ENST00000538410 TRIM35Q9UPQ4 493 aa26.98■■□□□ 1.91
COPS7A-208ENST00000538410 GOLGA2Q08379 1002 aa26.97■■□□□ 1.91
COPS7A-208ENST00000538410 EN1Q05925 392 aaPredicted RBP26.96■■□□□ 1.91
COPS7A-208ENST00000538410 CDCA7LQ96GN5 454 aa26.95■■□□□ 1.91
COPS7A-208ENST00000538410 MTHFSDQ2M296 383 aaKnown RBP26.94■■□□□ 1.9
COPS7A-208ENST00000538410 WDR63Q8IWG1 891 aa26.94■■□□□ 1.9
COPS7A-208ENST00000538410 DISP2A7MBM2 1401 aa26.94■■□□□ 1.9
COPS7A-208ENST00000538410 GAS2L2Q8NHY3 880 aa26.93■■□□□ 1.9
COPS7A-208ENST00000538410 OVOS2A0A0G2JMS6 1433 aa26.92■■□□□ 1.9
COPS7A-208ENST00000538410 APBA3O96018 575 aa26.91■■□□□ 1.9
COPS7A-208ENST00000538410 LMOD3Q0VAK6 560 aa26.91■■□□□ 1.9
COPS7A-208ENST00000538410 SLFN5Q08AF3 891 aa26.9■■□□□ 1.9
COPS7A-208ENST00000538410 VIRMAQ69YN4 1812 aaKnown RBP26.9■■□□□ 1.9
COPS7A-208ENST00000538410 EXOC5O00471 708 aa26.9■■□□□ 1.9
COPS7A-208ENST00000538410 PKD1L3Q7Z443 1732 aa26.89■■□□□ 1.9
COPS7A-208ENST00000538410 RAPGEF4Q8WZA2 1011 aa26.89■■□□□ 1.9
COPS7A-208ENST00000538410 PLEKHG2Q9H7P9 1386 aa26.88■■□□□ 1.89
COPS7A-208ENST00000538410 MEGF6O75095 1541 aa26.88■■□□□ 1.89
COPS7A-208ENST00000538410 SBF2Q86WG5 1849 aa26.88■■□□□ 1.89
COPS7A-208ENST00000538410 E9PSI1 815 aa26.88■■□□□ 1.89
COPS7A-208ENST00000538410 SPINK5Q9NQ38 1064 aaPredicted RBP26.88■■□□□ 1.89
COPS7A-208ENST00000538410 EZH2Q15910 746 aaKnown RBP26.87■■□□□ 1.89
COPS7A-208ENST00000538410 AMOTQ4VCS5 1084 aa26.87■■□□□ 1.89
COPS7A-208ENST00000538410 PLEKHO1Q53GL0 409 aaPredicted RBP26.87■■□□□ 1.89
COPS7A-208ENST00000538410 TRMT2AQ8IZ69 625 aaKnown RBP26.87■■□□□ 1.89
COPS7A-208ENST00000538410 MARCH10Q8NA82 808 aaPredicted RBP26.87■■□□□ 1.89
COPS7A-208ENST00000538410 TATP17735 454 aaPredicted RBP26.87■■□□□ 1.89
COPS7A-208ENST00000538410 CAMKK2Q96RR4 588 aa26.86■■□□□ 1.89
COPS7A-208ENST00000538410 IL16Q14005 1332 aa26.86■■□□□ 1.89
COPS7A-208ENST00000538410 IL2RBP14784 551 aa26.85■■□□□ 1.89
COPS7A-208ENST00000538410 DUSP27Q5VZP5 1158 aa26.84■■□□□ 1.89
COPS7A-208ENST00000538410 HTATSF1O43719 755 aaKnown RBP26.83■■□□□ 1.89
COPS7A-208ENST00000538410 MAP3K5Q99683 1374 aa26.83■■□□□ 1.89
COPS7A-208ENST00000538410 GNAT3A8MTJ3 354 aa26.83■■□□□ 1.88
COPS7A-208ENST00000538410 CALD1Q05682 793 aaKnown RBP26.83■■□□□ 1.88
COPS7A-208ENST00000538410 TNS2Q63HR2 1409 aa26.82■■□□□ 1.88
COPS7A-208ENST00000538410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.82■■□□□ 1.88
COPS7A-208ENST00000538410 BCL9O00512 1426 aa26.81■■□□□ 1.88
COPS7A-208ENST00000538410 DCTN1Q14203 1278 aa26.81■■□□□ 1.88
COPS7A-208ENST00000538410 RTF1Q92541 710 aaKnown RBP26.81■■□□□ 1.88
COPS7A-208ENST00000538410 THUMPD2Q9BTF0 503 aaKnown RBP26.81■■□□□ 1.88
COPS7A-208ENST00000538410 ZNF530Q6P9A1 599 aaPredicted RBP26.8■■□□□ 1.88
COPS7A-208ENST00000538410 MCM10Q7L590 875 aa26.79■■□□□ 1.88
COPS7A-208ENST00000538410 MYH16Q9H6N6 1097 aa26.79■■□□□ 1.88
COPS7A-208ENST00000538410 SHANK3Q9BYB0 1731 aa26.79■■□□□ 1.88
COPS7A-208ENST00000538410 AKAP4Q5JQC9 854 aa26.79■■□□□ 1.88
COPS7A-208ENST00000538410 BCL11BQ9C0K0 894 aaPredicted RBP26.79■■□□□ 1.88
COPS7A-208ENST00000538410 SPG7Q9UQ90 795 aa26.79■■□□□ 1.88
COPS7A-208ENST00000538410 RREB1Q92766 1687 aa26.78■■□□□ 1.88
COPS7A-208ENST00000538410 PSDA5PKW4 1024 aaPredicted RBP26.78■■□□□ 1.88
COPS7A-208ENST00000538410 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
COPS7A-208ENST00000538410 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
COPS7A-208ENST00000538410 SCN11AQ9UI33 1791 aa26.76■■□□□ 1.87
COPS7A-208ENST00000538410 IFT57Q9NWB7 429 aa26.76■■□□□ 1.87
COPS7A-208ENST00000538410 ZNF853P0CG23 659 aa26.74■■□□□ 1.87
COPS7A-208ENST00000538410 GNAI1P63096 354 aa26.74■■□□□ 1.87
COPS7A-208ENST00000538410 PTF1AQ7RTS3 328 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms