RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
CDCA3-206ENST00000536241 QTRT2Q9H974 415 aaKnown RBP15.15■□□□□ 0.02
CDCA3-206ENST00000536241 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
CDCA3-206ENST00000536241 THRAP3Q9Y2W1 955 aaKnown RBP15.15■□□□□ 0.02
CDCA3-206ENST00000536241 WWC1Q8IX03 1113 aa15.14■□□□□ 0.01
CDCA3-206ENST00000536241 NGEFQ8N5V2 710 aa15.14■□□□□ 0.01
CDCA3-206ENST00000536241 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
CDCA3-206ENST00000536241 MEGF6O75095 1541 aa15.14■□□□□ 0.01
CDCA3-206ENST00000536241 ZBED9Q6R2W3 1325 aa15.14■□□□□ 0.01
CDCA3-206ENST00000536241 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-206ENST00000536241 ZCRB1Q8TBF4 217 aaKnown RBP15.14■□□□□ 0.01
CDCA3-206ENST00000536241 GJD4Q96KN9 370 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-206ENST00000536241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDCA3-206ENST00000536241 TRPC5Q9UL62 973 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-206ENST00000536241 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
CDCA3-206ENST00000536241 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
CDCA3-206ENST00000536241 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
CDCA3-206ENST00000536241 BARGINQ6ZT62 677 aa15.13■□□□□ 0.01
CDCA3-206ENST00000536241 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
CDCA3-206ENST00000536241 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
CDCA3-206ENST00000536241 EXOC5O00471 708 aa15.12■□□□□ 0.01
CDCA3-206ENST00000536241 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
CDCA3-206ENST00000536241 MCM10Q7L590 875 aa15.11■□□□□ 0.01
CDCA3-206ENST00000536241 DDX54Q8TDD1 881 aaKnown RBP15.11■□□□□ 0.01
CDCA3-206ENST00000536241 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
CDCA3-206ENST00000536241 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-206ENST00000536241 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
CDCA3-206ENST00000536241 CYP27B1O15528 508 aa15.1■□□□□ 0.01
CDCA3-206ENST00000536241 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
CDCA3-206ENST00000536241 C1orf141Q5JVX7 400 aa15.1■□□□□ 0.01
CDCA3-206ENST00000536241 ZNF772Q68DY9 489 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-206ENST00000536241 RTF1Q92541 710 aaKnown RBP15.1■□□□□ 0.01
CDCA3-206ENST00000536241 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
CDCA3-206ENST00000536241 OVOS2A0A0G2JMS6 1433 aa15.1■□□□□ 0.01
CDCA3-206ENST00000536241 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
CDCA3-206ENST00000536241 PHKG2P15735 406 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 IL17REQ8NFR9 667 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 LGR6Q9HBX8 967 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 ATRNO75882 1429 aa15.09■□□□□ 0.01
CDCA3-206ENST00000536241 GOLGA2Q08379 1002 aa15.08■□□□□ 0.01
CDCA3-206ENST00000536241 DDB1Q16531 1140 aa15.08■□□□□ 0.01
CDCA3-206ENST00000536241 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
CDCA3-206ENST00000536241 MAP3K5Q99683 1374 aa15.08■□□□□ 0
CDCA3-206ENST00000536241 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
CDCA3-206ENST00000536241 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
CDCA3-206ENST00000536241 PLEKHG2Q9H7P9 1386 aa15.07■□□□□ 0
CDCA3-206ENST00000536241 A0A0G2JS52 829 aa15.07■□□□□ 0
CDCA3-206ENST00000536241 RNMTO43148 476 aaKnown RBP15.07■□□□□ 0
CDCA3-206ENST00000536241 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
CDCA3-206ENST00000536241 MYT1Q01538 1121 aa15.07■□□□□ 0
CDCA3-206ENST00000536241 PDE3BQ13370 1112 aa15.07■□□□□ 0
CDCA3-206ENST00000536241 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
CDCA3-206ENST00000536241 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
CDCA3-206ENST00000536241 PARP4Q9UKK3 1724 aaKnown RBP15.05■□□□□ 0
CDCA3-206ENST00000536241 SLFN5Q08AF3 891 aa15.05■□□□□ -0
CDCA3-206ENST00000536241 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
CDCA3-206ENST00000536241 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
CDCA3-206ENST00000536241 RBM6P78332 1123 aaKnown RBP15.04■□□□□ -0
CDCA3-206ENST00000536241 SEPT12Q8IYM1 358 aa15.04■□□□□ -0
CDCA3-206ENST00000536241 DCAF5Q96JK2 942 aa15.04■□□□□ -0
CDCA3-206ENST00000536241 GLI3P10071 1580 aa15.04■□□□□ -0
CDCA3-206ENST00000536241 PKD1L3Q7Z443 1732 aa15.03■□□□□ -0
CDCA3-206ENST00000536241 CALD1Q05682 793 aaKnown RBP15.03■□□□□ -0
CDCA3-206ENST00000536241 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
CDCA3-206ENST00000536241 MARCH10Q8NA82 808 aaPredicted RBP15.03■□□□□ -0
CDCA3-206ENST00000536241 E9PSI1 815 aa15.02■□□□□ -0
CDCA3-206ENST00000536241 POTEAQ6S8J7 498 aa15.02■□□□□ -0
CDCA3-206ENST00000536241 MIS18AQ9NYP9 233 aa15.02■□□□□ -0
CDCA3-206ENST00000536241 IL16Q14005 1332 aa15.02■□□□□ -0
CDCA3-206ENST00000536241 RXRBP28702 533 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-206ENST00000536241 TRMT2AQ8IZ69 625 aaKnown RBP15.01□□□□□ -0.01
CDCA3-206ENST00000536241 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 ZNF853P0CG23 659 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 GNAI1P63096 354 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 TEFQ10587 303 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
CDCA3-206ENST00000536241 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 WNK3Q9BYP7 1800 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 CHL1O00533 1208 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 CABP4P57796 275 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
CDCA3-206ENST00000536241 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 IFT57Q9NWB7 429 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
CDCA3-206ENST00000536241 TNS2Q63HR2 1409 aa15□□□□□ -0.01
CDCA3-206ENST00000536241 ERVV-2B6SEH9 535 aa14.99□□□□□ -0.01
CDCA3-206ENST00000536241 SHANK3Q9BYB0 1731 aa14.99□□□□□ -0.01
CDCA3-206ENST00000536241 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
CDCA3-206ENST00000536241 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
CDCA3-206ENST00000536241 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-206ENST00000536241 FAM182BQ5T319 152 aa14.98□□□□□ -0.01
CDCA3-206ENST00000536241 KAT6BQ8WYB5 2073 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms