RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
TDRD3-208ENST00000535286 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 KIF16BQ96L93 1317 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 CHL1O00533 1208 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 RGPD2P0DJD1 1756 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
TDRD3-208ENST00000535286 IPO8O15397 1037 aaKnown RBP13.35□□□□□ -0.27
TDRD3-208ENST00000535286 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
TDRD3-208ENST00000535286 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 MCM10Q7L590 875 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 CRB1P82279 1406 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
TDRD3-208ENST00000535286 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
TDRD3-208ENST00000535286 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
TDRD3-208ENST00000535286 FRAT1Q92837 279 aaPredicted RBP13.34□□□□□ -0.27
TDRD3-208ENST00000535286 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
TDRD3-208ENST00000535286 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
TDRD3-208ENST00000535286 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
TDRD3-208ENST00000535286 AHDC1Q5TGY3 1603 aaPredicted RBP13.33□□□□□ -0.27
TDRD3-208ENST00000535286 VAMP4O75379 141 aa13.33□□□□□ -0.28
TDRD3-208ENST00000535286 TWISTNBQ3B726 338 aaPredicted RBP13.33□□□□□ -0.28
TDRD3-208ENST00000535286 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
TDRD3-208ENST00000535286 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
TDRD3-208ENST00000535286 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
TDRD3-208ENST00000535286 ROBO1Q9Y6N7 1651 aa13.32□□□□□ -0.28
TDRD3-208ENST00000535286 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
TDRD3-208ENST00000535286 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
TDRD3-208ENST00000535286 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
TDRD3-208ENST00000535286 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■□□ 16.9
TDRD3-208ENST00000535286 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
TDRD3-208ENST00000535286 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
TDRD3-208ENST00000535286 FTSJ3Q8IY81 847 aaKnown RBP13.3□□□□□ -0.28
TDRD3-208ENST00000535286 ARHGAP45Q92619 1136 aa13.3□□□□□ -0.28
TDRD3-208ENST00000535286 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
TDRD3-208ENST00000535286 TAF7Q15545 349 aaPredicted RBP13.3□□□□□ -0.28
TDRD3-208ENST00000535286 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
TDRD3-208ENST00000535286 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
TDRD3-208ENST00000535286 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
TDRD3-208ENST00000535286 CHMP4AQ9BY43 222 aa13.29□□□□□ -0.28
TDRD3-208ENST00000535286 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
TDRD3-208ENST00000535286 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
TDRD3-208ENST00000535286 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
TDRD3-208ENST00000535286 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
TDRD3-208ENST00000535286 TOM1O60784 492 aa13.28□□□□□ -0.28
TDRD3-208ENST00000535286 TSPYL6Q8N831 410 aa13.28□□□□□ -0.28
TDRD3-208ENST00000535286 CHMP4BQ9H444 224 aaKnown RBP13.28□□□□□ -0.28
TDRD3-208ENST00000535286 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
TDRD3-208ENST00000535286 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
TDRD3-208ENST00000535286 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.28
TDRD3-208ENST00000535286 PANK1Q8TE04 598 aa13.27□□□□□ -0.28
TDRD3-208ENST00000535286 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.28
TDRD3-208ENST00000535286 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
TDRD3-208ENST00000535286 TEFQ10587 303 aa13.27□□□□□ -0.29
TDRD3-208ENST00000535286 MVPQ14764 893 aaKnown RBP13.27□□□□□ -0.29
TDRD3-208ENST00000535286 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
TDRD3-208ENST00000535286 TRIM27P14373 513 aa13.26□□□□□ -0.29
TDRD3-208ENST00000535286 CLUAP1Q96AJ1 413 aa13.26□□□□□ -0.29
TDRD3-208ENST00000535286 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
TDRD3-208ENST00000535286 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
TDRD3-208ENST00000535286 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
TDRD3-208ENST00000535286 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
TDRD3-208ENST00000535286 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
TDRD3-208ENST00000535286 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
TDRD3-208ENST00000535286 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
TDRD3-208ENST00000535286 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
TDRD3-208ENST00000535286 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
TDRD3-208ENST00000535286 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 RLBP1P12271 317 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 EVA1CP58658 441 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 TOM1L2Q6ZVM7 507 aa13.24□□□□□ -0.29
TDRD3-208ENST00000535286 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
TDRD3-208ENST00000535286 HOXB7P09629 217 aa13.23□□□□□ -0.29
TDRD3-208ENST00000535286 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
TDRD3-208ENST00000535286 PTPRCP08575 1304 aa13.23□□□□□ -0.29
TDRD3-208ENST00000535286 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
TDRD3-208ENST00000535286 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 MEGF6O75095 1541 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 ITPRIPQ8IWB1 547 aa13.22□□□□□ -0.29
TDRD3-208ENST00000535286 PHKG2P15735 406 aa13.21□□□□□ -0.29
TDRD3-208ENST00000535286 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
TDRD3-208ENST00000535286 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.29
TDRD3-208ENST00000535286 KDM2BQ8NHM5 1336 aa13.21□□□□□ -0.3
TDRD3-208ENST00000535286 BTBD11A6QL63 1104 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms