RNA–Protein interactions for RNA: ENST00000534784.1

CFL1-215, Transcript of cofilin 1, humanhuman

TSL 3

Gene CFL1, Length 737 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-215ENST00000534784 NBPF4Q96M43 638 aa25.3■■□□□ 1.64
CFL1-215ENST00000534784 TUBGCP6Q96RT7 1819 aa25.3■■□□□ 1.64
CFL1-215ENST00000534784 HSP90AB2PQ58FF8 381 aa25.29■■□□□ 1.64
CFL1-215ENST00000534784 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
CFL1-215ENST00000534784 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
CFL1-215ENST00000534784 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
CFL1-215ENST00000534784 QSER1Q2KHR3 1735 aa25.27■■□□□ 1.64
CFL1-215ENST00000534784 DDX54Q8TDD1 881 aaKnown RBP25.27■■□□□ 1.64
CFL1-215ENST00000534784 POLR3GLQ9BT43 218 aa25.26■■□□□ 1.63
CFL1-215ENST00000534784 PDGFDQ9GZP0 370 aaPredicted RBP25.26■■□□□ 1.63
CFL1-215ENST00000534784 NSD2O96028 1365 aa25.26■■□□□ 1.63
CFL1-215ENST00000534784 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
CFL1-215ENST00000534784 CGNL1Q0VF96 1302 aa25.24■■□□□ 1.63
CFL1-215ENST00000534784 ITGB4P16144 1822 aa25.23■■□□□ 1.63
CFL1-215ENST00000534784 ZCRB1Q8TBF4 217 aaKnown RBP25.22■■□□□ 1.63
CFL1-215ENST00000534784 SLC15A2Q16348 729 aa25.2■■□□□ 1.62
CFL1-215ENST00000534784 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
CFL1-215ENST00000534784 STK32BQ9NY57 414 aa25.19■■□□□ 1.62
CFL1-215ENST00000534784 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
CFL1-215ENST00000534784 RAPGEF4Q8WZA2 1011 aa25.17■■□□□ 1.62
CFL1-215ENST00000534784 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
CFL1-215ENST00000534784 PRIM1P49642 420 aaKnown RBP25.16■■□□□ 1.62
CFL1-215ENST00000534784 ZNF827Q17R98 1081 aa25.16■■□□□ 1.62
CFL1-215ENST00000534784 C5P01031 1676 aa25.16■■□□□ 1.62
CFL1-215ENST00000534784 WASHC2AQ641Q2 1341 aa25.15■■□□□ 1.62
CFL1-215ENST00000534784 COL24A1Q17RW2 1714 aa25.15■■□□□ 1.62
CFL1-215ENST00000534784 TATP17735 454 aaPredicted RBP25.15■■□□□ 1.62
CFL1-215ENST00000534784 SYTL4Q96C24 671 aaPredicted RBP25.15■■□□□ 1.62
CFL1-215ENST00000534784 POLKQ9UBT6 870 aa25.15■■□□□ 1.62
CFL1-215ENST00000534784 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
CFL1-215ENST00000534784 ZBTB7AO95365 584 aa25.14■■□□□ 1.62
CFL1-215ENST00000534784 PANK3Q9H999 370 aa25.14■■□□□ 1.62
CFL1-215ENST00000534784 PCDH11XQ9BZA7 1347 aa25.13■■□□□ 1.61
CFL1-215ENST00000534784 PCDH11YQ9BZA8 1340 aa25.13■■□□□ 1.61
CFL1-215ENST00000534784 PTGER2P43116 358 aa25.11■■□□□ 1.61
CFL1-215ENST00000534784 CYP27B1O15528 508 aa25.1■■□□□ 1.61
CFL1-215ENST00000534784 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
CFL1-215ENST00000534784 PPP1R1BQ9UD71 204 aaPredicted RBP25.1■■□□□ 1.61
CFL1-215ENST00000534784 KCNQ4P56696 695 aa25.09■■□□□ 1.61
CFL1-215ENST00000534784 EYA1Q99502 592 aa25.09■■□□□ 1.61
CFL1-215ENST00000534784 SLC27A3Q5K4L6 730 aa25.08■■□□□ 1.61
CFL1-215ENST00000534784 AKT1S1Q96B36 256 aa25.08■■□□□ 1.61
CFL1-215ENST00000534784 ATF5Q9Y2D1 282 aaPredicted RBP25.07■■□□□ 1.6
CFL1-215ENST00000534784 EIF4A2Q14240 407 aaKnown RBP25.06■■□□□ 1.6
CFL1-215ENST00000534784 SGIP1Q9BQI5 828 aa25.06■■□□□ 1.6
CFL1-215ENST00000534784 MTFR1LQ9H019 292 aa25.05■■□□□ 1.6
CFL1-215ENST00000534784 KIF7Q2M1P5 1343 aa25.05■■□□□ 1.6
CFL1-215ENST00000534784 PNPLA7Q6ZV29 1317 aa25.03■■□□□ 1.6
CFL1-215ENST00000534784 C4BP0C0L5 1744 aa25.01■■□□□ 1.59
CFL1-215ENST00000534784 CCNL1Q9UK58 526 aaPredicted RBP25.01■■□□□ 1.59
CFL1-215ENST00000534784 IGSF1Q8N6C5 1336 aa25.01■■□□□ 1.59
CFL1-215ENST00000534784 PALLDQ8WX93 1383 aa25.01■■□□□ 1.59
CFL1-215ENST00000534784 UBR3Q6ZT12 1888 aa25■■□□□ 1.59
CFL1-215ENST00000534784 PLEKHG2Q9H7P9 1386 aa24.98■■□□□ 1.59
CFL1-215ENST00000534784 NKX1-1Q15270 411 aaPredicted RBP24.98■■□□□ 1.59
CFL1-215ENST00000534784 MPRIPQ6WCQ1 1025 aa24.98■■□□□ 1.59
CFL1-215ENST00000534784 SPG7Q9UQ90 795 aa24.97■■□□□ 1.59
CFL1-215ENST00000534784 VIRMAQ69YN4 1812 aaKnown RBP24.97■■□□□ 1.59
CFL1-215ENST00000534784 AMER1Q5JTC6 1135 aaPredicted RBP24.96■■□□□ 1.59
CFL1-215ENST00000534784 MORC1Q86VD1 984 aa24.96■■□□□ 1.59
CFL1-215ENST00000534784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.96■■□□□ 1.59
CFL1-215ENST00000534784 KNSTRNQ9Y448 316 aa24.96■■□□□ 1.59
CFL1-215ENST00000534784 TFCP2L1Q9NZI6 479 aa24.95■■□□□ 1.58
CFL1-215ENST00000534784 PHKG2P15735 406 aa24.94■■□□□ 1.58
CFL1-215ENST00000534784 FHDC1Q9C0D6 1143 aaPredicted RBP24.94■■□□□ 1.58
CFL1-215ENST00000534784 PIGBQ92521 554 aa24.93■■□□□ 1.58
CFL1-215ENST00000534784 SCN11AQ9UI33 1791 aa24.91■■□□□ 1.58
CFL1-215ENST00000534784 IFNL2Q8IZJ0 200 aa24.91■■□□□ 1.58
CFL1-215ENST00000534784 SLC16A10Q8TF71 515 aa24.91■■□□□ 1.58
CFL1-215ENST00000534784 SYT17Q9BSW7 474 aa24.91■■□□□ 1.58
CFL1-215ENST00000534784 MAP3K5Q99683 1374 aa24.91■■□□□ 1.58
CFL1-215ENST00000534784 COL5A3P25940 1745 aaPredicted RBP24.9■■□□□ 1.58
CFL1-215ENST00000534784 KDM6AO15550 1401 aaPredicted RBP24.9■■□□□ 1.58
CFL1-215ENST00000534784 AEBP1Q8IUX7 1158 aa24.9■■□□□ 1.58
CFL1-215ENST00000534784 ARXQ96QS3 562 aa24.9■■□□□ 1.58
CFL1-215ENST00000534784 ZNF831Q5JPB2 1677 aa24.9■■□□□ 1.58
CFL1-215ENST00000534784 PER1O15534 1290 aaPredicted RBP24.89■■□□□ 1.58
CFL1-215ENST00000534784 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.58
CFL1-215ENST00000534784 COL23A1Q86Y22 540 aaPredicted RBP24.88■■□□□ 1.57
CFL1-215ENST00000534784 KDRP35968 1356 aa24.88■■□□□ 1.57
CFL1-215ENST00000534784 CHD4Q14839 1912 aa24.87■■□□□ 1.57
CFL1-215ENST00000534784 SMARCC1Q92922 1105 aaPredicted RBP24.87■■□□□ 1.57
CFL1-215ENST00000534784 TMOD3Q9NYL9 352 aa24.86■■□□□ 1.57
CFL1-215ENST00000534784 AMIGO3Q86WK7 504 aa24.85■■□□□ 1.57
CFL1-215ENST00000534784 IL13P35225 146 aa24.84■■□□□ 1.57
CFL1-215ENST00000534784 ASAP1Q9ULH1 1129 aa24.84■■□□□ 1.57
CFL1-215ENST00000534784 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.56
CFL1-215ENST00000534784 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
CFL1-215ENST00000534784 SIK1P57059 783 aa24.82■■□□□ 1.56
CFL1-215ENST00000534784 CICQ96RK0 1608 aaPredicted RBP24.82■■□□□ 1.56
CFL1-215ENST00000534784 POLD1P28340 1107 aa24.81■■□□□ 1.56
CFL1-215ENST00000534784 CC2D1BQ5T0F9 858 aaKnown RBP24.81■■□□□ 1.56
CFL1-215ENST00000534784 SULT6B1Q6IMI4 303 aa24.81■■□□□ 1.56
CFL1-215ENST00000534784 ZNF530Q6P9A1 599 aaPredicted RBP24.81■■□□□ 1.56
CFL1-215ENST00000534784 LINC00116Q8NCU8 138 aa24.81■■□□□ 1.56
CFL1-215ENST00000534784 TJP1Q07157 1748 aa24.81■■□□□ 1.56
CFL1-215ENST00000534784 ITPK1Q13572 414 aa24.8■■□□□ 1.56
CFL1-215ENST00000534784 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
CFL1-215ENST00000534784 ATG3Q9NT62 314 aa24.8■■□□□ 1.56
CFL1-215ENST00000534784 ADAMTS7Q9UKP4 1686 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms