RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ZC3H6P61129 1189 aaKnown RBP19.87■□□□□ 0.77
ATP2C1-224ENST00000533801 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
ATP2C1-224ENST00000533801 CHMP4BQ9H444 224 aaKnown RBP19.87■□□□□ 0.77
ATP2C1-224ENST00000533801 FLT4P35916 1363 aa19.87■□□□□ 0.77
ATP2C1-224ENST00000533801 GAS2L2Q8NHY3 880 aa19.86■□□□□ 0.77
ATP2C1-224ENST00000533801 EXOC6BQ9Y2D4 811 aa19.86■□□□□ 0.77
ATP2C1-224ENST00000533801 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
ATP2C1-224ENST00000533801 HSCBQ8IWL3 235 aa19.85■□□□□ 0.77
ATP2C1-224ENST00000533801 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
ATP2C1-224ENST00000533801 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 PROSER2Q86WR7 435 aaPredicted RBP19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 TTC21AQ8NDW8 1320 aa19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 UBR1Q8IWV7 1749 aa19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 TECPR2O15040 1411 aa19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 MSH6P52701 1360 aa19.84■□□□□ 0.77
ATP2C1-224ENST00000533801 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.77
ATP2C1-224ENST00000533801 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.77
ATP2C1-224ENST00000533801 ANKRD26Q9UPS8 1709 aa19.83■□□□□ 0.76
ATP2C1-224ENST00000533801 GCC1Q96CN9 775 aa19.82■□□□□ 0.76
ATP2C1-224ENST00000533801 ARHGAP45Q92619 1136 aa19.82■□□□□ 0.76
ATP2C1-224ENST00000533801 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
ATP2C1-224ENST00000533801 ABCC4O15439 1325 aa19.82■□□□□ 0.76
ATP2C1-224ENST00000533801 HAP1P54257 671 aaPredicted RBP19.81■□□□□ 0.76
ATP2C1-224ENST00000533801 LGR6Q9HBX8 967 aa19.81■□□□□ 0.76
ATP2C1-224ENST00000533801 OVOS2A0A0J9YW53 1432 aa19.81■□□□□ 0.76
ATP2C1-224ENST00000533801 OVOS2Q6IE36 1432 aa19.81■□□□□ 0.76
ATP2C1-224ENST00000533801 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
ATP2C1-224ENST00000533801 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 NBPF6Q5VWK0 638 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 IL17REQ8NFR9 667 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 NBPF4Q96M43 638 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 TEFQ10587 303 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 TBC1D9Q6ZT07 1266 aa19.8■□□□□ 0.76
ATP2C1-224ENST00000533801 ZNF530Q6P9A1 599 aaPredicted RBP19.79■□□□□ 0.76
ATP2C1-224ENST00000533801 PHAXQ9H814 394 aaKnown RBP19.79■□□□□ 0.76
ATP2C1-224ENST00000533801 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
ATP2C1-224ENST00000533801 KCNQ3O43525 872 aa19.79■□□□□ 0.76
ATP2C1-224ENST00000533801 FLIIQ13045 1269 aa19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 GSE1Q14687 1217 aa19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 CSB-PGBD3P0DP91 1061 aa19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
ATP2C1-224ENST00000533801 CEP85Q6P2H3 762 aa19.77■□□□□ 0.76
ATP2C1-224ENST00000533801 PIK3R4Q99570 1358 aa19.77■□□□□ 0.75
ATP2C1-224ENST00000533801 TRIM6-TRIM34B2RNG4 842 aa19.76■□□□□ 0.75
ATP2C1-224ENST00000533801 IL1RAPL2Q9NP60 686 aa19.76■□□□□ 0.75
ATP2C1-224ENST00000533801 AIMP1Q12904 312 aaKnown RBP19.76■□□□□ 0.75
ATP2C1-224ENST00000533801 RILPL2Q969X0 211 aa19.76■□□□□ 0.75
ATP2C1-224ENST00000533801 CCDC30Q5VVM6 783 aa19.75■□□□□ 0.75
ATP2C1-224ENST00000533801 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
ATP2C1-224ENST00000533801 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
ATP2C1-224ENST00000533801 RIMS1Q86UR5 1692 aaKnown RBP19.75■□□□□ 0.75
ATP2C1-224ENST00000533801 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
ATP2C1-224ENST00000533801 MAP4K4O95819 1239 aaPredicted RBP19.74■□□□□ 0.75
ATP2C1-224ENST00000533801 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
ATP2C1-224ENST00000533801 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
ATP2C1-224ENST00000533801 HSPA2P54652 639 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 PLEKHM2Q8IWE5 1019 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 LRRFIP2Q9Y608 721 aaKnown RBP19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 GSPT1P15170 499 aaKnown RBP19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 BMP2KLQ5H9B9 411 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 BRPF3Q9ULD4 1205 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 CEP170BQ9Y4F5 1589 aaPredicted RBP19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 HMMRO75330 724 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 C1orf141Q5JVX7 400 aa19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 INTS3Q68E01 1043 aaKnown RBP19.73■□□□□ 0.75
ATP2C1-224ENST00000533801 DIP2AQ14689 1571 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 CHRNA2Q15822 529 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 ANKRD44Q8N8A2 993 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 PTCH1Q13635 1447 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 CDC45O75419 566 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 GCP02774 474 aa19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
ATP2C1-224ENST00000533801 GNAI2P04899 355 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 C3P01024 1663 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 TPRNQ4KMQ1 711 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 DCTPP1Q9H773 170 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 ARHGEF10O15013 1369 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 BTBD11A6QL63 1104 aa19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 PIP4K2AP48426 406 aaPredicted RBP19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 BRPF1P55201 1214 aaPredicted RBP19.71■□□□□ 0.75
ATP2C1-224ENST00000533801 FOXD4L5Q5VV16 416 aaPredicted RBP19.7■□□□□ 0.74
ATP2C1-224ENST00000533801 FOXD4L4Q8WXT5 416 aaPredicted RBP19.7■□□□□ 0.74
ATP2C1-224ENST00000533801 CHPF2Q9P2E5 772 aa19.7■□□□□ 0.74
ATP2C1-224ENST00000533801 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
ATP2C1-224ENST00000533801 KRT28Q7Z3Y7 464 aa19.7■□□□□ 0.74
ATP2C1-224ENST00000533801 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 RPAP2Q8IXW5 612 aaPredicted RBP19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 PTPRCP08575 1304 aa19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 MON2Q7Z3U7 1717 aa19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 CD2BP2O95400 341 aaKnown RBP19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 FER1L4A9Z1Z3 1794 aa19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
ATP2C1-224ENST00000533801 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 CCT4P50991 539 aaKnown RBP19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms