RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 INSRP06213 1382 aa15.72■□□□□ 0.11
CLCF1-202ENST00000533438 MAP2P11137 1827 aaKnown RBP15.71■□□□□ 0.11
CLCF1-202ENST00000533438 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
CLCF1-202ENST00000533438 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
CLCF1-202ENST00000533438 FLT4P35916 1363 aa15.71■□□□□ 0.11
CLCF1-202ENST00000533438 SMG6Q86US8 1419 aaKnown RBP15.7■□□□□ 0.1
CLCF1-202ENST00000533438 HSP90AB2PQ58FF8 381 aa15.69■□□□□ 0.1
CLCF1-202ENST00000533438 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
CLCF1-202ENST00000533438 SYT17Q9BSW7 474 aa15.69■□□□□ 0.1
CLCF1-202ENST00000533438 LY75O60449 1722 aa15.68■□□□□ 0.1
CLCF1-202ENST00000533438 ZCRB1Q8TBF4 217 aaKnown RBP15.68■□□□□ 0.1
CLCF1-202ENST00000533438 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
CLCF1-202ENST00000533438 HSPA5P11021 654 aaKnown RBP15.67■□□□□ 0.1
CLCF1-202ENST00000533438 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLCF1-202ENST00000533438 USHBP1Q8N6Y0 703 aa15.67■□□□□ 0.1
CLCF1-202ENST00000533438 MTFR1LQ9H019 292 aa15.67■□□□□ 0.1
CLCF1-202ENST00000533438 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
CLCF1-202ENST00000533438 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
CLCF1-202ENST00000533438 QSER1Q2KHR3 1735 aa15.67■□□□□ 0.1
CLCF1-202ENST00000533438 PKD1L3Q7Z443 1732 aa15.66■□□□□ 0.1
CLCF1-202ENST00000533438 NSD2O96028 1365 aa15.66■□□□□ 0.1
CLCF1-202ENST00000533438 MAP3K5Q99683 1374 aa15.66■□□□□ 0.1
CLCF1-202ENST00000533438 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
CLCF1-202ENST00000533438 ZNF784Q8NCA9 323 aaPredicted RBP15.66■□□□□ 0.1
CLCF1-202ENST00000533438 NCAPD2Q15021 1401 aa15.66■□□□□ 0.1
CLCF1-202ENST00000533438 LRRC4BQ9NT99 713 aa15.65■□□□□ 0.1
CLCF1-202ENST00000533438 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
CLCF1-202ENST00000533438 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
CLCF1-202ENST00000533438 FHDC1Q9C0D6 1143 aaPredicted RBP15.64■□□□□ 0.09
CLCF1-202ENST00000533438 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CLCF1-202ENST00000533438 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
CLCF1-202ENST00000533438 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
CLCF1-202ENST00000533438 WASHC2AQ641Q2 1341 aa15.63■□□□□ 0.09
CLCF1-202ENST00000533438 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
CLCF1-202ENST00000533438 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
CLCF1-202ENST00000533438 SLC27A3Q5K4L6 730 aa15.62■□□□□ 0.09
CLCF1-202ENST00000533438 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
CLCF1-202ENST00000533438 ITGB4P16144 1822 aa15.61■□□□□ 0.09
CLCF1-202ENST00000533438 COL24A1Q17RW2 1714 aa15.61■□□□□ 0.09
CLCF1-202ENST00000533438 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
CLCF1-202ENST00000533438 POLKQ9UBT6 870 aa15.61■□□□□ 0.09
CLCF1-202ENST00000533438 PCDH11XQ9BZA7 1347 aa15.61■□□□□ 0.09
CLCF1-202ENST00000533438 PCDH11YQ9BZA8 1340 aa15.61■□□□□ 0.09
CLCF1-202ENST00000533438 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
CLCF1-202ENST00000533438 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
CLCF1-202ENST00000533438 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
CLCF1-202ENST00000533438 ARXQ96QS3 562 aa15.59■□□□□ 0.09
CLCF1-202ENST00000533438 PANK3Q9H999 370 aa15.59■□□□□ 0.09
CLCF1-202ENST00000533438 CYP27B1O15528 508 aa15.58■□□□□ 0.08
CLCF1-202ENST00000533438 TAF1LQ8IZX4 1826 aa15.58■□□□□ 0.08
CLCF1-202ENST00000533438 C5P01031 1676 aa15.57■□□□□ 0.08
CLCF1-202ENST00000533438 EYA1Q99502 592 aa15.57■□□□□ 0.08
CLCF1-202ENST00000533438 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
CLCF1-202ENST00000533438 KCNQ4P56696 695 aa15.56■□□□□ 0.08
CLCF1-202ENST00000533438 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
CLCF1-202ENST00000533438 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
CLCF1-202ENST00000533438 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
CLCF1-202ENST00000533438 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
CLCF1-202ENST00000533438 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-202ENST00000533438 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-202ENST00000533438 GOLGB1Q14789 3259 aaKnown RBP15.53■□□□□ 0.08
CLCF1-202ENST00000533438 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
CLCF1-202ENST00000533438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLCF1-202ENST00000533438 SPG7Q9UQ90 795 aa15.53■□□□□ 0.08
CLCF1-202ENST00000533438 IGSF1Q8N6C5 1336 aa15.52■□□□□ 0.08
CLCF1-202ENST00000533438 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
CLCF1-202ENST00000533438 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
CLCF1-202ENST00000533438 TFCP2L1Q9NZI6 479 aa15.51■□□□□ 0.07
CLCF1-202ENST00000533438 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
CLCF1-202ENST00000533438 C4BP0C0L5 1744 aa15.5■□□□□ 0.07
CLCF1-202ENST00000533438 PHKG2P15735 406 aa15.49■□□□□ 0.07
CLCF1-202ENST00000533438 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
CLCF1-202ENST00000533438 PIGBQ92521 554 aa15.49■□□□□ 0.07
CLCF1-202ENST00000533438 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
CLCF1-202ENST00000533438 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
CLCF1-202ENST00000533438 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
CLCF1-202ENST00000533438 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
CLCF1-202ENST00000533438 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
CLCF1-202ENST00000533438 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
CLCF1-202ENST00000533438 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
CLCF1-202ENST00000533438 POLD1P28340 1107 aa15.46■□□□□ 0.07
CLCF1-202ENST00000533438 GPR162Q16538 588 aa15.46■□□□□ 0.07
CLCF1-202ENST00000533438 COL23A1Q86Y22 540 aaPredicted RBP15.46■□□□□ 0.07
CLCF1-202ENST00000533438 CHD4Q14839 1912 aa15.45■□□□□ 0.06
CLCF1-202ENST00000533438 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CLCF1-202ENST00000533438 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
CLCF1-202ENST00000533438 TMOD3Q9NYL9 352 aa15.44■□□□□ 0.06
CLCF1-202ENST00000533438 KDRP35968 1356 aa15.44■□□□□ 0.06
CLCF1-202ENST00000533438 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
CLCF1-202ENST00000533438 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
CLCF1-202ENST00000533438 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
CLCF1-202ENST00000533438 IL13P35225 146 aa15.42■□□□□ 0.06
CLCF1-202ENST00000533438 SIK1P57059 783 aa15.42■□□□□ 0.06
CLCF1-202ENST00000533438 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
CLCF1-202ENST00000533438 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
CLCF1-202ENST00000533438 ASAP1Q9ULH1 1129 aa15.42■□□□□ 0.06
CLCF1-202ENST00000533438 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
CLCF1-202ENST00000533438 VIRMAQ69YN4 1812 aaKnown RBP15.41■□□□□ 0.06
CLCF1-202ENST00000533438 COL5A3P25940 1745 aaPredicted RBP15.41■□□□□ 0.06
CLCF1-202ENST00000533438 AMOTQ4VCS5 1084 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms