RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CGNL1Q0VF96 1302 aa26.23■■□□□ 1.79
SSH3-209ENST00000532600 PDGFDQ9GZP0 370 aaPredicted RBP26.23■■□□□ 1.79
SSH3-209ENST00000532600 PAPPAQ13219 1627 aa26.23■■□□□ 1.79
SSH3-209ENST00000532600 ZCRB1Q8TBF4 217 aaKnown RBP26.22■■□□□ 1.79
SSH3-209ENST00000532600 MAP2P11137 1827 aaKnown RBP26.22■■□□□ 1.79
SSH3-209ENST00000532600 SMG6Q86US8 1419 aaKnown RBP26.22■■□□□ 1.79
SSH3-209ENST00000532600 KAT6BQ8WYB5 2073 aa26.2■■□□□ 1.78
SSH3-209ENST00000532600 NSD2O96028 1365 aa26.2■■□□□ 1.78
SSH3-209ENST00000532600 PANK3Q9H999 370 aa26.19■■□□□ 1.78
SSH3-209ENST00000532600 NCAPD2Q15021 1401 aa26.19■■□□□ 1.78
SSH3-209ENST00000532600 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
SSH3-209ENST00000532600 WASHC2AQ641Q2 1341 aa26.16■■□□□ 1.78
SSH3-209ENST00000532600 PRIM1P49642 420 aaKnown RBP26.16■■□□□ 1.78
SSH3-209ENST00000532600 LRRC4BQ9NT99 713 aa26.16■■□□□ 1.78
SSH3-209ENST00000532600 PPM1GO15355 546 aaPredicted RBP26.15■■□□□ 1.78
SSH3-209ENST00000532600 SLC15A2Q16348 729 aa26.15■■□□□ 1.78
SSH3-209ENST00000532600 RAPGEF4Q8WZA2 1011 aa26.14■■□□□ 1.78
SSH3-209ENST00000532600 SPON1Q9HCB6 807 aa26.13■■□□□ 1.77
SSH3-209ENST00000532600 STK32BQ9NY57 414 aa26.13■■□□□ 1.77
SSH3-209ENST00000532600 PKD1L3Q7Z443 1732 aa26.13■■□□□ 1.77
SSH3-209ENST00000532600 LY75O60449 1722 aa26.12■■□□□ 1.77
SSH3-209ENST00000532600 TATP17735 454 aaPredicted RBP26.12■■□□□ 1.77
SSH3-209ENST00000532600 TNNT2P45379 298 aaPredicted RBP26.12■■□□□ 1.77
SSH3-209ENST00000532600 ZNF827Q17R98 1081 aa26.11■■□□□ 1.77
SSH3-209ENST00000532600 SYTL4Q96C24 671 aaPredicted RBP26.1■■□□□ 1.77
SSH3-209ENST00000532600 EYA1Q99502 592 aa26.1■■□□□ 1.77
SSH3-209ENST00000532600 TOGARAM1Q9Y4F4 1720 aa26.09■■□□□ 1.77
SSH3-209ENST00000532600 CYP27B1O15528 508 aa26.09■■□□□ 1.77
SSH3-209ENST00000532600 ZBTB7AO95365 584 aa26.08■■□□□ 1.77
SSH3-209ENST00000532600 KCNQ4P56696 695 aa26.08■■□□□ 1.77
SSH3-209ENST00000532600 KIF7Q2M1P5 1343 aa26.08■■□□□ 1.77
SSH3-209ENST00000532600 PCDH11XQ9BZA7 1347 aa26.07■■□□□ 1.76
SSH3-209ENST00000532600 PCDH11YQ9BZA8 1340 aa26.07■■□□□ 1.76
SSH3-209ENST00000532600 PTGER2P43116 358 aa26.06■■□□□ 1.76
SSH3-209ENST00000532600 EIF4A2Q14240 407 aaKnown RBP26.06■■□□□ 1.76
SSH3-209ENST00000532600 AKT1S1Q96B36 256 aa26.05■■□□□ 1.76
SSH3-209ENST00000532600 SLC27A3Q5K4L6 730 aa26.04■■□□□ 1.76
SSH3-209ENST00000532600 TUBGCP6Q96RT7 1819 aa26.04■■□□□ 1.76
SSH3-209ENST00000532600 ATF5Q9Y2D1 282 aaPredicted RBP26.03■■□□□ 1.76
SSH3-209ENST00000532600 SGIP1Q9BQI5 828 aa26.02■■□□□ 1.76
SSH3-209ENST00000532600 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
SSH3-209ENST00000532600 ITGB4P16144 1822 aa26.02■■□□□ 1.76
SSH3-209ENST00000532600 AMER1Q5JTC6 1135 aaPredicted RBP26■■□□□ 1.75
SSH3-209ENST00000532600 PPP1R1BQ9UD71 204 aaPredicted RBP26■■□□□ 1.75
SSH3-209ENST00000532600 NKX1-1Q15270 411 aaPredicted RBP25.99■■□□□ 1.75
SSH3-209ENST00000532600 IGSF1Q8N6C5 1336 aa25.98■■□□□ 1.75
SSH3-209ENST00000532600 MORC1Q86VD1 984 aa25.98■■□□□ 1.75
SSH3-209ENST00000532600 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
SSH3-209ENST00000532600 KNSTRNQ9Y448 316 aa25.97■■□□□ 1.75
SSH3-209ENST00000532600 PNPLA7Q6ZV29 1317 aa25.96■■□□□ 1.75
SSH3-209ENST00000532600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.96■■□□□ 1.75
SSH3-209ENST00000532600 CCNL1Q9UK58 526 aaPredicted RBP25.96■■□□□ 1.75
SSH3-209ENST00000532600 PER1O15534 1290 aaPredicted RBP25.95■■□□□ 1.74
SSH3-209ENST00000532600 MPRIPQ6WCQ1 1025 aa25.95■■□□□ 1.74
SSH3-209ENST00000532600 SPG7Q9UQ90 795 aa25.95■■□□□ 1.74
SSH3-209ENST00000532600 COL24A1Q17RW2 1714 aa25.94■■□□□ 1.74
SSH3-209ENST00000532600 PIGBQ92521 554 aa25.93■■□□□ 1.74
SSH3-209ENST00000532600 PALLDQ8WX93 1383 aa25.93■■□□□ 1.74
SSH3-209ENST00000532600 C5P01031 1676 aa25.93■■□□□ 1.74
SSH3-209ENST00000532600 PHKG2P15735 406 aa25.92■■□□□ 1.74
SSH3-209ENST00000532600 TAF1LQ8IZX4 1826 aa25.92■■□□□ 1.74
SSH3-209ENST00000532600 AEBP1Q8IUX7 1158 aa25.9■■□□□ 1.74
SSH3-209ENST00000532600 TFCP2L1Q9NZI6 479 aa25.9■■□□□ 1.74
SSH3-209ENST00000532600 PLEKHG2Q9H7P9 1386 aa25.9■■□□□ 1.74
SSH3-209ENST00000532600 IFNL2Q8IZJ0 200 aa25.88■■□□□ 1.73
SSH3-209ENST00000532600 IL13P35225 146 aa25.87■■□□□ 1.73
SSH3-209ENST00000532600 FHDC1Q9C0D6 1143 aaPredicted RBP25.87■■□□□ 1.73
SSH3-209ENST00000532600 SLC16A10Q8TF71 515 aa25.85■■□□□ 1.73
SSH3-209ENST00000532600 C4BP0C0L5 1744 aa25.84■■□□□ 1.73
SSH3-209ENST00000532600 COL23A1Q86Y22 540 aaPredicted RBP25.84■■□□□ 1.73
SSH3-209ENST00000532600 ARXQ96QS3 562 aa25.84■■□□□ 1.73
SSH3-209ENST00000532600 SYT17Q9BSW7 474 aa25.84■■□□□ 1.73
SSH3-209ENST00000532600 KDRP35968 1356 aa25.83■■□□□ 1.73
SSH3-209ENST00000532600 AMIGO3Q86WK7 504 aa25.83■■□□□ 1.73
SSH3-209ENST00000532600 SMARCC1Q92922 1105 aaPredicted RBP25.83■■□□□ 1.73
SSH3-209ENST00000532600 KDM6AO15550 1401 aaPredicted RBP25.82■■□□□ 1.72
SSH3-209ENST00000532600 TMOD3Q9NYL9 352 aa25.82■■□□□ 1.72
SSH3-209ENST00000532600 ASAP1Q9ULH1 1129 aa25.82■■□□□ 1.72
SSH3-209ENST00000532600 MTHFSP49914 203 aa25.81■■□□□ 1.72
SSH3-209ENST00000532600 CC2D1BQ5T0F9 858 aaKnown RBP25.81■■□□□ 1.72
SSH3-209ENST00000532600 SULT6B1Q6IMI4 303 aa25.8■■□□□ 1.72
SSH3-209ENST00000532600 ATG3Q9NT62 314 aa25.8■■□□□ 1.72
SSH3-209ENST00000532600 PLEKHO1Q53GL0 409 aaPredicted RBP25.79■■□□□ 1.72
SSH3-209ENST00000532600 MAP3K5Q99683 1374 aa25.79■■□□□ 1.72
SSH3-209ENST00000532600 LOC102724428A0A0B4J2F2 783 aa25.78■■□□□ 1.72
SSH3-209ENST00000532600 SIK1P57059 783 aa25.78■■□□□ 1.72
SSH3-209ENST00000532600 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
SSH3-209ENST00000532600 UBR3Q6ZT12 1888 aa25.78■■□□□ 1.72
SSH3-209ENST00000532600 NPC1L1Q9UHC9 1359 aa25.78■■□□□ 1.72
SSH3-209ENST00000532600 ITPK1Q13572 414 aa25.77■■□□□ 1.72
SSH3-209ENST00000532600 SMIM5Q71RC9 77 aa25.77■■□□□ 1.72
SSH3-209ENST00000532600 LINC00116Q8NCU8 138 aa25.77■■□□□ 1.72
SSH3-209ENST00000532600 AMOTQ4VCS5 1084 aa25.76■■□□□ 1.71
SSH3-209ENST00000532600 DCAF5Q96JK2 942 aa25.76■■□□□ 1.71
SSH3-209ENST00000532600 ERVV-2B6SEH9 535 aa25.75■■□□□ 1.71
SSH3-209ENST00000532600 COL3A1P02461 1466 aaPredicted RBP25.74■■□□□ 1.71
SSH3-209ENST00000532600 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
SSH3-209ENST00000532600 SLC4A9Q96Q91 983 aa25.74■■□□□ 1.71
SSH3-209ENST00000532600 MSH5O43196 834 aa25.73■■□□□ 1.71
SSH3-209ENST00000532600 MSL1Q68DK7 614 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms