RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 NRDCO43847 1150 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 MPRIPQ6WCQ1 1025 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 PRIMPOLQ96LW4 560 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 FAM177BA6PVY3 158 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 HSPA1LP34931 641 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 NUCB2P80303 420 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 HS1BP3Q53T59 392 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 TSR2Q969E8 191 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 BRD4O60885 1362 aaPredicted RBP8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 RICTORQ6R327 1708 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 RNF17Q9BXT8 1623 aaKnown RBP8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 TRPM2O94759 1503 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 SLC4A10Q6U841 1118 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 COG6Q9Y2V7 657 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 RALGAPBQ86X10 1494 aa8.23□□□□□ -1.09
TGFBR3-209ENST00000532540 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 APBB1O00213 710 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 IGSF3O75054 1194 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 CAMSAP1Q5T5Y3 1602 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 E9PCH4 1651 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 POLKQ9UBT6 870 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 PRDM4Q9UKN5 801 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 PIK3C2GO75747 1445 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 AIMP1Q12904 312 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 ILDR2Q71H61 639 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 KCNH5Q8NCM2 988 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 TRERF1Q96PN7 1200 aa8.22□□□□□ -1.09
TGFBR3-209ENST00000532540 KIF16BQ96L93 1317 aa8.21□□□□□ -1.09
TGFBR3-209ENST00000532540 NCBP3Q53F19 620 aaKnown RBP8.21□□□□□ -1.09
TGFBR3-209ENST00000532540 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.1
TGFBR3-209ENST00000532540 AGLP35573 1532 aa8.21□□□□□ -1.1
TGFBR3-209ENST00000532540 WWC3Q9ULE0 1092 aa8.21□□□□□ -1.1
TGFBR3-209ENST00000532540 CROCC2H7BZ55 1655 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 TET3O43151 1660 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 CALRP27797 417 aaKnown RBP8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 PPP1R1BQ9UD71 204 aaPredicted RBP8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 ZMYM4Q5VZL5 1548 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 PIP4K2AP48426 406 aaPredicted RBP8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 IQGAP3Q86VI3 1631 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 TTC5Q8N0Z6 440 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 TSPYL4Q9UJ04 414 aa8.2□□□□□ -1.1
TGFBR3-209ENST00000532540 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 TRIM6-TRIM34B2RNG4 842 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 TPM3P06753 285 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 FOXD4L5Q5VV16 416 aaPredicted RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 MPNDQ8N594 471 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 FOXD4L4Q8WXT5 416 aaPredicted RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 ADAMTS13Q76LX8 1427 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 MBD3O95983 291 aa8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 NOL7Q9UMY1 257 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-209ENST00000532540 PIK3C2BO00750 1634 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 CLGNO14967 610 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 SLC39A6Q13433 755 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 USP21Q9UK80 565 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 ST18O60284 1047 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 C20orf194Q5TEA3 1177 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 EYA1Q99502 592 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 DEF6Q9H4E7 631 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 SMC4Q9NTJ3 1288 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 ANKRD36BQ8N2N9 1353 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 PRPF40AO75400 957 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 KCNQ4P56696 695 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 PHACTR3Q96KR7 559 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 IFT57Q9NWB7 429 aa8.18□□□□□ -1.1
TGFBR3-209ENST00000532540 UNC13BO14795 1591 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 SYNMO15061 1565 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 PLEKHO1Q53GL0 409 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 FEZ1Q99689 392 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 GOLGA6L4A6NEF3 574 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 EXOC5O00471 708 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 ANXA1P04083 346 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 GTF2A1P52655 376 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 CABP4P57796 275 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 SETQ01105 290 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 NBPF6Q5VWK0 638 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 NBPF4Q96M43 638 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 PLEKHG3A1L390 1219 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 KLHL40Q2TBA0 621 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms