RNA–Protein interactions for RNA: ENST00000531413.5

CFL1-212, Transcript of cofilin 1, humanhuman

TSL 3 BASIC

Gene CFL1, Length 636 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-212ENST00000531413 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
CFL1-212ENST00000531413 NLRP2Q9NX02 1062 aa23.07■■□□□ 1.28
CFL1-212ENST00000531413 CCNL1Q9UK58 526 aaPredicted RBP23.07■■□□□ 1.28
CFL1-212ENST00000531413 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
CFL1-212ENST00000531413 NSD2O96028 1365 aa23.05■■□□□ 1.28
CFL1-212ENST00000531413 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
CFL1-212ENST00000531413 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
CFL1-212ENST00000531413 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
CFL1-212ENST00000531413 ERBB3P21860 1342 aa23.05■■□□□ 1.28
CFL1-212ENST00000531413 FSTL1Q12841 308 aa23.04■■□□□ 1.28
CFL1-212ENST00000531413 PRIM1P49642 420 aaKnown RBP23.03■■□□□ 1.28
CFL1-212ENST00000531413 LTN1O94822 1766 aa23.02■■□□□ 1.28
CFL1-212ENST00000531413 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
CFL1-212ENST00000531413 DDX54Q8TDD1 881 aaKnown RBP23.02■■□□□ 1.28
CFL1-212ENST00000531413 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
CFL1-212ENST00000531413 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
CFL1-212ENST00000531413 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
CFL1-212ENST00000531413 N4BP2Q86UW6 1770 aaPredicted RBP22.99■■□□□ 1.27
CFL1-212ENST00000531413 TTC21BQ7Z4L5 1316 aa22.98■■□□□ 1.27
CFL1-212ENST00000531413 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
CFL1-212ENST00000531413 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
CFL1-212ENST00000531413 UBR3Q6ZT12 1888 aa22.96■■□□□ 1.27
CFL1-212ENST00000531413 FLAD1Q8NFF5 587 aa22.95■■□□□ 1.26
CFL1-212ENST00000531413 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
CFL1-212ENST00000531413 STAC3Q96MF2 364 aa22.93■■□□□ 1.26
CFL1-212ENST00000531413 KIAA1210Q9ULL0 1709 aa22.93■■□□□ 1.26
CFL1-212ENST00000531413 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
CFL1-212ENST00000531413 USP47Q96K76 1375 aa22.92■■□□□ 1.26
CFL1-212ENST00000531413 TNRC6CQ9HCJ0 1690 aaKnown RBP22.92■■□□□ 1.26
CFL1-212ENST00000531413 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
CFL1-212ENST00000531413 C4BP0C0L5 1744 aa22.91■■□□□ 1.26
CFL1-212ENST00000531413 AMIGO3Q86WK7 504 aa22.91■■□□□ 1.26
CFL1-212ENST00000531413 BRCA1P38398 1863 aaKnown RBP22.91■■□□□ 1.26
CFL1-212ENST00000531413 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
CFL1-212ENST00000531413 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
CFL1-212ENST00000531413 ARHGAP27Q6ZUM4 889 aa22.89■■□□□ 1.25
CFL1-212ENST00000531413 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
CFL1-212ENST00000531413 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.25
CFL1-212ENST00000531413 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
CFL1-212ENST00000531413 FAM208AQ9UK61 1670 aaKnown RBP22.87■■□□□ 1.25
CFL1-212ENST00000531413 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
CFL1-212ENST00000531413 C9orf131Q5VYM1 1079 aa22.87■■□□□ 1.25
CFL1-212ENST00000531413 SMIM5Q71RC9 77 aa22.87■■□□□ 1.25
CFL1-212ENST00000531413 SMC1BQ8NDV3 1235 aa22.86■■□□□ 1.25
CFL1-212ENST00000531413 RRAGCQ9HB90 399 aa22.86■■□□□ 1.25
CFL1-212ENST00000531413 ARFGEF1Q9Y6D6 1849 aa22.86■■□□□ 1.25
CFL1-212ENST00000531413 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
CFL1-212ENST00000531413 ZNF692Q9BU19 519 aaPredicted RBP22.84■■□□□ 1.25
CFL1-212ENST00000531413 RGPD2P0DJD1 1756 aa22.84■■□□□ 1.25
CFL1-212ENST00000531413 SBF1O95248 1867 aa22.83■■□□□ 1.25
CFL1-212ENST00000531413 MON2Q7Z3U7 1717 aa22.83■■□□□ 1.25
CFL1-212ENST00000531413 PHF14O94880 888 aa22.83■■□□□ 1.25
CFL1-212ENST00000531413 NBPF1Q3BBV0 1214 aa22.83■■□□□ 1.25
CFL1-212ENST00000531413 A0A0G2JLW4 131 aa22.81■■□□□ 1.24
CFL1-212ENST00000531413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.8■■□□□ 1.24
CFL1-212ENST00000531413 AK7Q96M32 723 aa22.8■■□□□ 1.24
CFL1-212ENST00000531413 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
CFL1-212ENST00000531413 PALLDQ8WX93 1383 aa22.79■■□□□ 1.24
CFL1-212ENST00000531413 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
CFL1-212ENST00000531413 FCHSD2O94868 740 aa22.77■■□□□ 1.24
CFL1-212ENST00000531413 TGFB2P61812 414 aa22.77■■□□□ 1.24
CFL1-212ENST00000531413 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
CFL1-212ENST00000531413 MEGF6O75095 1541 aa22.77■■□□□ 1.24
CFL1-212ENST00000531413 NSD3Q9BZ95 1437 aa22.76■■□□□ 1.23
CFL1-212ENST00000531413 FOXN1O15353 648 aa22.76■■□□□ 1.23
CFL1-212ENST00000531413 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
CFL1-212ENST00000531413 ITGB4P16144 1822 aa22.75■■□□□ 1.23
CFL1-212ENST00000531413 MMP10P09238 476 aa22.75■■□□□ 1.23
CFL1-212ENST00000531413 LTV1Q96GA3 475 aaPredicted RBP22.75■■□□□ 1.23
CFL1-212ENST00000531413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
CFL1-212ENST00000531413 PRDM10Q9NQV6 1147 aa22.74■■□□□ 1.23
CFL1-212ENST00000531413 RNF181Q9P0P0 153 aa22.74■■□□□ 1.23
CFL1-212ENST00000531413 DPEP1P16444 411 aa22.73■■□□□ 1.23
CFL1-212ENST00000531413 SSFA2P28290 1259 aa22.73■■□□□ 1.23
CFL1-212ENST00000531413 MAP2P11137 1827 aaKnown RBP22.73■■□□□ 1.23
CFL1-212ENST00000531413 NME9Q86XW9 330 aa22.72■■□□□ 1.23
CFL1-212ENST00000531413 EVC2Q86UK5 1308 aa22.72■■□□□ 1.23
CFL1-212ENST00000531413 PDE4DIPQ5VU43 2346 aa22.7■■□□□ 1.22
CFL1-212ENST00000531413 IP6K1Q92551 441 aa22.69■■□□□ 1.22
CFL1-212ENST00000531413 KCNA3P22001 575 aa22.67■■□□□ 1.22
CFL1-212ENST00000531413 MKRN1Q9UHC7 482 aaKnown RBP22.67■■□□□ 1.22
CFL1-212ENST00000531413 C4AP0C0L4 1744 aa22.67■■□□□ 1.22
CFL1-212ENST00000531413 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
CFL1-212ENST00000531413 ABHD8Q96I13 439 aa22.66■■□□□ 1.22
CFL1-212ENST00000531413 MLLT1Q03111 559 aaPredicted RBP22.65■■□□□ 1.22
CFL1-212ENST00000531413 LINC00116Q8NCU8 138 aa22.65■■□□□ 1.22
CFL1-212ENST00000531413 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
CFL1-212ENST00000531413 SBNO2Q9Y2G9 1366 aa22.64■■□□□ 1.22
CFL1-212ENST00000531413 CCDC88AQ3V6T2 1871 aa22.64■■□□□ 1.21
CFL1-212ENST00000531413 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
CFL1-212ENST00000531413 GNPATO15228 680 aa22.62■■□□□ 1.21
CFL1-212ENST00000531413 CTCFP49711 727 aaPredicted RBP22.62■■□□□ 1.21
CFL1-212ENST00000531413 SMARCC1Q92922 1105 aaPredicted RBP22.62■■□□□ 1.21
CFL1-212ENST00000531413 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
CFL1-212ENST00000531413 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
CFL1-212ENST00000531413 PIM2Q9P1W9 311 aa22.6■■□□□ 1.21
CFL1-212ENST00000531413 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
CFL1-212ENST00000531413 CREBZFQ9NS37 354 aa22.59■■□□□ 1.21
CFL1-212ENST00000531413 TIAM2Q8IVF5 1701 aa22.59■■□□□ 1.21
CFL1-212ENST00000531413 LBX1P52954 281 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms